Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 3.0e-273 944.5 456 100.0
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 5.7e-163 578.2 471 60.9
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 1.3e-162 577.0 479 61.0
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 2.8e-162 575.9 475 60.8
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 8.2e-162 574.3 473 60.7
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 3.1e-161 572.4 483 60.5
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 1.7e-159 566.6 480 60.0
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 5.0e-159 565.1 471 60.1
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 3.2e-158 562.4 482 59.5
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 7.2e-158 561.2 467 60.2
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 9.4e-158 560.8 463 62.2
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 1.6e-157 560.1 477 59.5
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 2.1e-157 559.7 467 61.5
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 2.7e-157 559.3 489 59.7
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 1.4e-156 557.0 485 59.2
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 3.9e-156 555.4 460 60.4
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 8.8e-156 554.3 461 61.8
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 4.8e-154 548.5 487 60.4
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 1.8e-153 546.6 472 58.9
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 9.1e-153 544.3 477 59.5
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 3.4e-152 542.3 487 58.7
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 7.7e-152 541.2 470 59.1
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.3e-151 540.4 471 58.8
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 3.8e-151 538.9 473 59.0
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 8.5e-151 537.7 432 60.4
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 3.2e-150 535.8 473 59.0
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 5.5e-150 535.0 483 58.4
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 9.4e-150 534.3 474 58.4
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.2e-149 533.9 485 57.7
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.2e-149 533.9 485 57.7
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 6.7e-148 528.1 473 57.1
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 6.7e-148 528.1 480 57.1
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 1.5e-147 526.9 481 57.6
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 2.0e-147 526.6 482 56.2
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 9.7e-147 524.2 488 56.4
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 1.7e-146 523.5 478 57.7
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 3.7e-146 522.3 477 57.0
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 6.3e-146 521.5 428 59.6
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 1.1e-145 520.8 435 59.8
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 1.1e-145 520.8 484 56.2
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 5.3e-145 518.5 474 56.5
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 5.3e-145 518.5 374 65.0
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 1.6e-144 516.9 473 56.4
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 1.6e-144 516.9 467 57.2
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 2.6e-144 516.2 385 64.4
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 3.5e-144 515.8 474 55.5
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 1.7e-143 513.5 437 57.9
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 3.8e-143 512.3 444 58.8
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 5.0e-143 511.9 467 58.7
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 8.5e-143 511.1 364 65.9
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 1.5e-142 510.4 435 58.2
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 5.5e-142 508.4 485 55.7
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 1.2e-141 507.3 420 60.2
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 1.6e-141 506.9 446 57.2
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 3.6e-141 505.8 423 60.5
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 3.6e-141 505.8 439 58.3
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 8.0e-141 504.6 429 58.0
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 1.4e-140 503.8 431 58.5
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 1.8e-140 503.4 420 60.2
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 5.2e-140 501.9 420 60.0
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 2.0e-139 500.0 489 54.6
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 2.6e-139 499.6 432 58.6
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 2.6e-139 499.6 432 58.6
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 2.6e-139 499.6 432 58.6
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 3.3e-139 499.2 430 58.8
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 5.7e-139 498.4 445 57.3
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 6.3e-138 495.0 421 58.9
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 5.9e-136 488.4 412 59.0
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 5.9e-136 488.4 416 58.7
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 5.9e-136 488.4 445 55.5
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 3.8e-135 485.7 465 55.1
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 6.5e-135 485.0 444 56.3
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 1.5e-134 483.8 492 53.9
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 2.5e-134 483.0 480 52.5
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 4.2e-134 482.3 370 62.4
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 2.1e-133 479.9 465 54.8
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 2.7e-133 479.6 472 53.8
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 4.7e-133 478.8 416 60.1
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 6.1e-133 478.4 422 55.0
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 4.0e-132 475.7 416 59.9
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 5.2e-132 475.3 466 54.5
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 6.8e-132 474.9 427 56.4
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 1.2e-131 474.2 421 57.7
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 1.5e-131 473.8 485 52.2
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 3.7e-130 469.2 455 54.7
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 1.4e-129 467.2 423 56.5
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 3.1e-129 466.1 479 53.7
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 5.4e-129 465.3 460 54.1
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.6e-128 463.8 455 53.6
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 1.6e-128 463.8 420 58.6
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 2.0e-128 463.4 458 53.7
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 2.7e-128 463.0 429 54.1
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.3e-127 459.9 458 53.5
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 8.0e-125 451.4 397 57.7
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 1.0e-124 451.1 390 59.2
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.7e-122 443.7 479 50.9
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 4.0e-116 422.5 371 55.8
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.6e-115 419.9 419 51.1
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 4.3e-102 375.9 390 48.5
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.9e-90 335.9 460 44.1
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 1.7e-87 327.4 286 57.7
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 4.2e-81 306.2 207 67.6
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 1.2e-80 304.7 356 46.6
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 3.6e-77 293.1 351 47.3
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 4.8e-77 292.7 252 57.5
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 2.4e-76 290.4 475 38.7
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 2.9e-74 283.5 286 53.8
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 1.1e-70 271.6 392 40.8
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 1.4e-57 228.0 386 37.0
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 1.3e-55 221.5 307 42.7
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 4.8e-45 186.4 207 51.2
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 7.4e-30 136.0 111 63.1
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 6.3e-29 132.9 176 46.6
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.4e-28 131.0 375 30.9
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 5.3e-28 129.8 375 31.2
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 5.9e-27 126.3 129 51.9
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.5e-25 121.7 332 33.4
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.0e-23 115.5 420 28.6
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 8.3e-21 105.9 53 84.9
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 8.5e-18 95.9 227 34.8
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 8.0e-08 62.8 99 39.4


User provided reference genes

Program Settings