Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 2.5e-209 731.9 378 100.0
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 2.1e-139 499.6 322 76.1
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 2.3e-138 496.1 324 75.9
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 9.9e-137 490.7 332 75.0
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 2.2e-136 489.6 318 76.1
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 4.9e-136 488.4 320 75.9
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.6e-134 483.4 335 72.8
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.6e-134 483.4 335 72.8
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.7e-134 482.6 335 72.5
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 7.8e-134 481.1 331 73.7
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 1.7e-133 479.9 333 73.0
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 3.0e-133 479.2 330 73.3
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 6.6e-133 478.0 334 72.8
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 8.6e-133 477.6 330 72.4
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 1.5e-132 476.9 331 72.5
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 3.3e-132 475.7 327 72.8
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 3.3e-132 475.7 335 71.9
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.3e-132 475.7 335 72.2
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 9.6e-132 474.2 333 72.7
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 1.2e-131 473.8 321 74.1
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 1.6e-131 473.4 319 74.0
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 2.8e-131 472.6 320 74.7
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 8.1e-131 471.1 318 75.2
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 1.4e-130 470.3 327 72.8
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 1.8e-130 469.9 319 73.0
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 2.4e-130 469.5 319 74.3
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 5.2e-130 468.4 327 72.5
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 6.9e-130 468.0 331 71.9
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 8.9e-130 467.6 328 72.0
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 2.6e-129 466.1 330 71.5
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 3.4e-129 465.7 330 72.1
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 4.4e-129 465.3 328 72.6
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 1.3e-128 463.8 328 71.6
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 1.3e-128 463.8 327 71.6
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 1.3e-128 463.8 327 70.6
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 1.7e-128 463.4 325 71.4
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 3.8e-128 462.2 315 73.0
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 4.9e-128 461.8 331 70.7
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 6.4e-128 461.5 328 72.0
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 6.4e-128 461.5 325 70.8
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 1.1e-127 460.7 331 70.4
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 1.1e-127 460.7 315 73.0
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 1.4e-127 460.3 320 71.9
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 3.2e-127 459.1 331 70.4
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 5.4e-127 458.4 318 71.4
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 7.1e-127 458.0 331 70.7
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 7.1e-127 458.0 313 73.2
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 9.3e-127 457.6 331 70.7
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 1.2e-126 457.2 327 70.3
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 3.5e-126 455.7 324 71.0
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 3.5e-126 455.7 324 71.0
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 3.5e-126 455.7 320 71.6
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 4.6e-126 455.3 323 70.3
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 4.6e-126 455.3 322 68.9
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 7.8e-126 454.5 315 72.1
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 5.1e-125 451.8 332 69.0
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 5.1e-125 451.8 335 68.7
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 8.7e-125 451.1 319 71.2
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 1.1e-124 450.7 329 68.4
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 3.3e-124 449.1 319 71.2
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 4.3e-124 448.7 335 68.7
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 9.6e-124 447.6 336 71.1
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 1.6e-123 446.8 332 68.1
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 4.8e-123 445.3 331 68.3
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 8.1e-123 444.5 334 69.2
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 8.1e-123 444.5 336 68.2
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 1.1e-122 444.1 360 64.4
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 5.8e-121 438.3 341 66.6
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 1.7e-120 436.8 320 69.4
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 6.4e-120 434.9 337 66.8
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 5.4e-119 431.8 324 67.9
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 7.1e-119 431.4 309 70.6
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 9.3e-119 431.0 332 68.1
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 1.0e-117 427.6 326 67.8
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 8.7e-117 424.5 319 68.3
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.5e-116 423.7 281 75.1
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 2.9e-112 409.5 317 67.2
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 8.4e-112 407.9 324 65.7
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 2.7e-110 402.9 283 70.3
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 3.9e-109 399.1 313 64.9
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 3.9e-109 399.1 320 66.2
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 9.0e-106 387.9 307 66.8
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 2.2e-104 383.3 430 51.6
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 7.9e-102 374.8 396 55.1
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 1.8e-101 373.6 336 59.5
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 8.7e-101 371.3 323 61.9
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 1.1e-100 370.9 350 59.7
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 3.3e-100 369.4 334 57.8
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 1.8e-98 363.6 270 69.6
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 4.1e-98 362.5 317 61.2
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 7.2e-95 351.7 365 55.9
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 1.6e-91 340.5 349 53.0
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 2.9e-88 329.7 315 56.2
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 7.7e-81 305.1 320 52.5
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 1.4e-77 294.3 205 71.2
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 5.7e-76 288.9 227 65.2
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 8.5e-72 275.0 291 51.5
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 1.8e-61 240.7 275 51.6
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 1.4e-58 231.1 346 41.0
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 1.6e-54 217.6 303 41.9
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 2.9e-48 196.8 161 63.4
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 7.3e-47 192.2 186 57.0
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 2.3e-45 187.2 201 52.2
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 5.4e-42 176.0 115 68.7
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 7.3e-39 165.6 104 75.0
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 2.0e-33 147.5 106 67.0
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 2.9e-19 100.5 229 34.5
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 1.3e-11 75.1 50 68.0
SEGI_13989 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 1.6e-09 68.2 76 50.0
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 3.0e-08 63.9 51 60.8
Os01g0764600 Oryza sativa ssp. japonica HOM05D007053 ORTHO05D008922 2.5e-07 60.8 138 37.7


User provided reference genes

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