Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03160 Eucalyptus grandis HOM05D004724 ORTHO05D005734 0.0e+00 1214.9 633 100.0
CiPaw.05G125900 Carya illinoinensis HOM05D004724 ORTHO05D005734 1.3e-266 922.9 635 73.9
QL03p072107 Quercus lobata HOM05D004724 ORTHO05D005734 8.4e-266 920.2 638 76.2
QL03p072513 Quercus lobata HOM05D004724 ORTHO05D005734 1.4e-265 919.5 638 76.2
Nn3g17424 Nelumbo nucifera HOM05D004724 ORTHO05D005734 4.6e-264 914.4 628 74.0
Nn4g23396 Nelumbo nucifera HOM05D004724 ORTHO05D005734 3.9e-263 911.4 609 75.5
Actinidia28645 Actinidia chinensis HOM05D004724 ORTHO05D005734 4.3e-262 907.9 635 73.4
GSVIVG01012211001 Vitis vinifera HOM05D004724 ORTHO05D005734 9.7e-262 906.7 637 75.5
PGR102G0250 Punica granatum HOM05D004724 ORTHO05D005734 6.9e-260 900.6 632 71.5
Sc04g0007630 Simmondsia chinensis HOM05D004724 ORTHO05D005734 7.2e-257 890.6 630 71.6
TAR622G0524 Trochodendron aralioides HOM05D004724 ORTHO05D005734 2.7e-256 888.6 633 72.7
MD13G1063400 Malus domestica HOM05D004724 ORTHO05D005734 1.0e-255 886.7 635 71.7
MD16G1061800 Malus domestica HOM05D004724 ORTHO05D005734 2.3e-255 885.6 635 72.0
Thecc.02G332500 Theobroma cacao HOM05D004724 ORTHO05D005734 6.7e-255 884.0 633 71.4
TWI79G1393 Tripterygium wilfordii HOM05D004724 ORTHO05D005734 9.7e-254 880.2 634 71.5
MELO3C011422.2 Cucumis melo HOM05D004724 ORTHO05D005734 2.2e-253 879.0 634 69.4
Hma1.2p1_0354F.1_g133420 Hydrangea macrophylla HOM05D004724 ORTHO05D005734 2.4e-252 875.5 634 71.0
TAR374G1337 Trochodendron aralioides HOM05D004724 ORTHO05D005734 5.3e-252 874.4 634 71.6
TWI31G1115 Tripterygium wilfordii HOM05D004724 ORTHO05D005734 7.7e-251 870.5 635 70.4
Cfa008886 Carpinus fangiana HOM05D004724 ORTHO05D005734 5.0e-250 867.8 636 70.1
Gohir.D02G129300 Gossypium hirsutum HOM05D004724 ORTHO05D005734 1.9e-249 865.9 633 69.4
Gorai.005G145100 Gossypium raimondii HOM05D004724 ORTHO05D005734 4.2e-249 864.8 633 69.4
CSS0008548 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 5.5e-249 864.4 635 71.2
CsaV3_6G033660 Cucumis sativus L. HOM05D004724 ORTHO05D005734 9.4e-249 863.6 634 68.3
Lj6A780T47 Lonicera japonica HOM05D004724 ORTHO05D005734 9.4e-249 863.6 637 69.7
Prupe.1G286100 Prunus persica HOM05D004724 ORTHO05D005734 6.7e-247 857.4 634 69.1
Atru.chr11.1649 Acer truncatum HOM05D004724 ORTHO05D005734 3.3e-246 855.1 634 68.6
ClCG08G010390 Citrullus lanatus HOM05D004724 ORTHO05D005734 4.4e-246 854.7 634 69.1
Manes.01G028400 Manihot esculenta HOM05D004724 ORTHO05D005734 5.7e-246 854.4 634 68.0
HanXRQChr08g0211831 Helianthus annuus HOM05D004724 ORTHO05D005734 7.0e-244 847.4 637 68.9
Gohir.A03G104200 Gossypium hirsutum HOM05D004724 ORTHO05D005734 1.2e-243 846.7 634 68.5
MBI16_g13587_MAGBIO Magnolia biondii HOM05D004724 ORTHO05D005734 1.3e-242 843.2 632 69.5
THA.LOC104822013 Tarenaya hassleriana HOM05D004724 ORTHO05D005734 3.8e-242 841.6 636 67.5
Dinv15029 Davidia involucrata HOM05D004724 ORTHO05D005734 6.1e-240 834.3 589 73.5
Migut.E00049 Erythranthe guttata HOM05D004724 ORTHO05D005734 8.0e-240 833.9 615 68.3
RcHm_v2.0_Chr4g0438491 Rosa chinensis HOM05D004724 ORTHO05D005734 1.0e-239 833.6 635 69.3
Haze_11916 Corylus avellana HOM05D004724 ORTHO05D005734 1.8e-239 832.8 649 67.6
Sed0014019 Sechium edule HOM05D004724 ORTHO05D005734 4.4e-238 828.2 635 66.8
Dinv34076 Davidia involucrata HOM05D004724 ORTHO05D005734 2.8e-237 825.5 587 74.4
Ciclev10031249m.g Citrus clementina HOM05D004724 ORTHO05D005734 4.5e-235 818.1 634 65.9
COL.COLO4_27896 Corchorus olitorius HOM05D004724 ORTHO05D005734 7.7e-235 817.4 639 66.2
MSTRG.13448 Avicennia marina HOM05D004724 ORTHO05D005734 2.2e-234 815.8 615 67.6
CANSAT64G0483 Cannabis sativa HOM05D004724 ORTHO05D005734 5.0e-234 814.7 634 65.9
Glyma.01G058200 Glycine max HOM05D004724 ORTHO05D005734 1.5e-233 813.1 633 64.9
Lalb_Chr10g0098781 Lupinus albus HOM05D004724 ORTHO05D005734 5.5e-233 811.2 635 67.2
Glyma.02G116000 Glycine max HOM05D004724 ORTHO05D005734 3.6e-232 808.5 630 65.2
AT1G26460 Arabidopsis thaliana HOM05D004724 ORTHO05D005734 6.1e-232 807.7 630 65.2
CARHR025500 Cardamine hirsuta HOM05D004724 ORTHO05D005734 1.0e-231 807.0 630 65.1
TPR.G24471 Trifolium pratense HOM05D004724 ORTHO05D005734 1.0e-231 807.0 633 64.8
ATR0064G103 Amborella trichopoda HOM05D004724 ORTHO05D005734 1.8e-231 806.2 617 66.9
Oeu048146.1 Olea europaea HOM05D004724 ORTHO05D005734 6.8e-231 804.3 635 66.1
FvH4_4g30160 Fragaria vesca HOM05D004724 ORTHO05D005734 3.4e-230 802.0 637 65.1
Aa31LG7G8630 Aethionema arabicum HOM05D004724 ORTHO05D005734 2.8e-229 798.9 630 64.0
AL1G39280 Arabidopsis lyrata HOM05D004724 ORTHO05D005734 3.7e-229 798.5 630 64.6
PSO017G2003 Papaver somniferum HOM05D004724 ORTHO05D005734 1.4e-228 796.6 628 65.1
Lj2g0005374 Lotus japonicus HOM05D004724 ORTHO05D005734 3.1e-228 795.4 631 64.0
Carub.0001s2456 Capsella rubella HOM05D004724 ORTHO05D005734 1.2e-227 793.5 630 64.1
Lsat_1_v5_gn_8_47681 Lactuca sativa HOM05D004724 ORTHO05D005734 2.0e-227 792.7 635 65.2
PSO478G4140 Papaver somniferum HOM05D004724 ORTHO05D005734 7.7e-227 790.8 628 64.8
AUR62003111 Chenopodium quinoa HOM05D004724 ORTHO05D005734 5.0e-226 788.1 633 63.5
Nitab4.5_0004171g0040 Nicotiana tabacum HOM05D004724 ORTHO05D005734 1.5e-225 786.6 635 63.3
Ca_04959_v3 Cicer arietinum L. HOM05D004724 ORTHO05D005734 1.9e-225 786.2 633 62.4
Potri.010G159100 Populus trichocarpa HOM05D004724 ORTHO05D005734 4.2e-225 785.0 639 64.3
PGSC0003DMG400028320 Solanum tuberosum HOM05D004724 ORTHO05D005734 2.7e-224 782.3 616 64.3
Sopen05g007210 Solanum pennellii HOM05D004724 ORTHO05D005734 3.6e-224 781.9 616 64.3
Cc11_g12080 Coffea canephora HOM05D004724 ORTHO05D005734 6.1e-224 781.2 644 64.6
THA.LOC104805036 Tarenaya hassleriana HOM05D004724 ORTHO05D005734 2.3e-223 779.2 632 64.4
EL10Ac6g14982 Beta vulgaris HOM05D004724 ORTHO05D005734 3.0e-223 778.9 632 64.2
Medtr5g044270 Medicago truncatula HOM05D004724 ORTHO05D005734 9.8e-222 773.9 633 61.8
AUR62007926 Chenopodium quinoa HOM05D004724 ORTHO05D005734 1.3e-221 773.5 633 64.1
FAN12G2645 Fragaria x ananassa HOM05D004724 ORTHO05D005734 1.3e-221 773.5 637 63.4
BolC5t31188H Brassica oleracea HOM05D004724 ORTHO05D005734 2.2e-221 772.7 625 62.2
SalBow8G1172 Salvia bowleyana HOM05D004724 ORTHO05D005734 4.9e-221 771.5 657 61.3
vmacro16381 Vaccinium macrocarpon HOM05D004724 ORTHO05D005734 1.1e-220 770.4 753 56.3
FAN22G1297 Fragaria x ananassa HOM05D004724 ORTHO05D005734 1.8e-220 769.6 645 64.2
Thhalv10007071m.g Eutrema salsugineum HOM05D004724 ORTHO05D005734 3.1e-220 768.8 620 63.7
CAN.G616.33 Capsicum annuum HOM05D004724 ORTHO05D005734 2.7e-219 765.8 619 63.5
Nitab4.5_0000231g0420 Nicotiana tabacum HOM05D004724 ORTHO05D005734 1.3e-218 763.5 682 58.5
A09p39880 Brassica napus HOM05D004724 ORTHO05D005734 3.8e-218 761.9 628 61.8
BraA09t39487Z Brassica rapa HOM05D004724 ORTHO05D005734 8.6e-218 760.8 628 61.6
C05p24540 Brassica napus HOM05D004724 ORTHO05D005734 1.9e-217 759.6 625 61.3
HPP92_009526 Vanilla planifolia HOM05D004724 ORTHO05D005734 4.2e-217 758.4 631 63.4
HPP92_009555 Vanilla planifolia HOM05D004724 ORTHO05D005734 2.8e-216 755.7 631 63.2
ECA233G5398 Erigeron canadensis HOM05D004724 ORTHO05D005734 3.6e-216 755.4 638 62.1
Hund25184 Selenicereus undatus HOM05D004724 ORTHO05D005734 5.7e-214 748.0 636 62.9
Rhsim12G0135900 Rhododendron simsii HOM05D004724 ORTHO05D005734 6.4e-213 744.6 608 63.7
Sabra10G0120800 Salix brachista HOM05D004724 ORTHO05D005734 8.3e-213 744.2 639 61.0
FAN07G2095 Fragaria x ananassa HOM05D004724 ORTHO05D005734 3.5e-211 738.8 643 62.1
arahy.Tifrunner.gnm1.ann1.06XI8G Arachis hypogaea HOM05D004724 ORTHO05D005734 1.3e-210 736.9 659 59.8
SalBow2G3108 Salvia bowleyana HOM05D004724 ORTHO05D005734 3.9e-210 735.3 660 58.9
arahy.Tifrunner.gnm1.ann1.CTA0UQ Arachis hypogaea HOM05D004724 ORTHO05D005734 2.3e-207 726.1 698 55.9
CDE04G2698 Ceratophyllum demersum HOM05D004724 ORTHO05D005734 1.5e-206 723.4 618 60.0
FAN17G2607 Fragaria x ananassa HOM05D004724 ORTHO05D005734 2.0e-206 723.0 654 59.6
Peaxi162Scf00175g00020 Petunia axillaris HOM05D004724 ORTHO05D005734 8.6e-202 707.6 741 54.4
Phvul.003G043100 Phaseolus vulgaris HOM05D004724 ORTHO05D005734 8.6e-202 707.6 633 57.8
SGA_v2.0_scaffold16G07777 Striga asiatica HOM05D004724 ORTHO05D005734 5.2e-191 671.8 655 55.6
Migut.L01196 Erythranthe guttata HOM05D004724 ORTHO05D005734 5.8e-190 668.3 616 57.3
Psat2g129640 Pisum sativum HOM05D004724 ORTHO05D005734 9.9e-190 667.5 528 62.7
Os07g0599000 Oryza sativa ssp. japonica HOM05D004724 ORTHO05D005734 1.6e-187 660.2 606 56.9
DCAR_027471 Daucus carota HOM05D004724 ORTHO05D005734 7.8e-187 657.9 638 53.9
Aqoxy3G03611 Aquilegia oxysepala HOM05D004724 ORTHO05D005734 1.2e-184 650.6 609 56.2
VMungo1215G0095 Vigna mungo HOM05D004724 ORTHO05D005734 6.2e-184 648.3 633 54.8
Zm00001eb326730 Zea mays HOM05D004724 ORTHO05D005734 5.4e-180 635.2 606 54.6
Zm00001eb108470 Zea mays HOM05D004724 ORTHO05D005734 4.3e-177 625.5 609 53.2
CiPaw.06G092100 Carya illinoinensis HOM05D004724 ORTHO05D005734 1.3e-176 624.0 669 54.6
SGA_v2.0_scaffold287G47167 Striga asiatica HOM05D004724 ORTHO05D005734 6.2e-160 568.5 507 60.0
SHI32884 Sapria himalayana HOM05D004724 ORTHO05D005734 9.4e-140 501.5 397 63.7
CSS0031560 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 1.7e-136 490.7 414 63.3
CSS0025326 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 3.6e-131 473.0 413 62.0
Solyc05g012390.4 Solanum lycopersicum HOM05D004724 ORTHO05D005734 8.2e-128 461.8 324 67.9
CSS0020440 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 3.5e-126 456.4 402 61.2
CSS0043256 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 6.5e-125 452.2 413 59.6
DCAR_027465 Daucus carota HOM05D004724 ORTHO05D005734 1.9e-124 450.7 337 65.0
SEGI_02789 Sequoiadendron giganteum HOM05D004724 ORTHO05D005734 6.1e-123 445.7 382 59.2
CSS0037716 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 1.4e-122 444.5 413 59.3
CDE07G1937 Ceratophyllum demersum HOM05D004724 ORTHO05D005734 1.4e-122 444.5 434 55.3
CSS0034194 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 3.7e-120 436.4 414 58.0
CSS0003173 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 5.9e-118 429.1 417 57.1
Ah.02g126900 Amaranthus hybridus HOM05D004724 ORTHO05D005734 3.0e-114 416.8 456 52.2
CSS0030883 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 5.5e-108 396.0 405 55.1
CSS0040633 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 2.3e-106 390.6 416 53.4
Cpa.g.sc1.117 Carica papaya HOM05D004724 ORTHO05D005734 7.0e-95 352.4 205 82.9
Mapoly0002s0313 Marchantia polymorpha HOM05D004724 ORTHO05D005734 3.5e-94 350.1 595 35.8
AagrBONN_evm.TU.Sc2ySwM_117.2858 Anthoceros agrestis HOM05D004724 ORTHO05D005734 2.3e-93 347.4 564 35.6
Nitab4.5_0011966g0020 Nicotiana tabacum HOM05D004724 ORTHO05D005734 1.3e-85 321.6 511 40.1
Pp3c1_28760 Physcomitrium patens HOM05D004724 ORTHO05D005734 5.6e-76 289.7 517 33.8
Pp3c14_20030 Physcomitrium patens HOM05D004724 ORTHO05D005734 3.6e-75 287.0 552 33.3
EL10Ac5g12464 Beta vulgaris HOM05D004724 ORTHO05D005734 9.9e-73 278.9 258 56.6
SHI32882 Sapria himalayana HOM05D004724 ORTHO05D005734 2.1e-62 244.6 167 71.3
QL03p072489 Quercus lobata HOM05D000013 ORTHO05D000011 1.0e-61 242.3 218 62.4
CBR_g55790 Chara braunii HOM05D004724 ORTHO05D005734 6.9e-58 229.6 596 27.2
SHI32782 Sapria himalayana HOM05D004724 ORTHO05D005734 3.4e-57 227.3 424 36.6
GSVIVG01028487001 Vitis vinifera HOM05D004724 ORTHO05D005734 4.5e-57 226.9 237 54.4
GSVIVG01021735001 Vitis vinifera HOM05D004724 ORTHO05D005734 1.4e-55 221.9 237 54.4
Actinidia32302 Actinidia chinensis HOM05D004724 ORTHO05D005734 2.4e-42 177.9 114 75.4
Actinidia32300 Actinidia chinensis HOM05D004724 ORTHO05D007268 1.9e-39 168.3 103 76.7
Medtr6g024415 Medicago truncatula HOM05D004724 ORTHO05D005734 2.0e-33 148.3 109 67.0
Ah.02g126910 Amaranthus hybridus HOM05D004724 ORTHO05D005734 2.6e-33 147.9 107 67.3
Gohir.D12G165033 Gossypium hirsutum HOM05D004724 ORTHO05D005734 5.9e-33 146.7 98 70.4
GSVIVG01009940001 Vitis vinifera HOM05D004724 ORTHO05D005734 2.2e-32 144.8 98 70.4
Actinidia32301 Actinidia chinensis HOM05D004724 ORTHO05D005734 7.4e-28 129.8 97 62.9
DCAR_027469 Daucus carota HOM05D004724 ORTHO05D005734 8.2e-27 126.3 243 35.8
QL03p072083 Quercus lobata HOM05D004724 ORTHO05D005734 9.1e-26 122.9 89 68.5
CDE07G0543 Ceratophyllum demersum HOM05D004724 ORTHO05D005734 3.2e-23 114.4 80 67.5
C07p19370 Brassica napus HOM05D004724 ORTHO05D005734 9.4e-23 112.8 86 59.3
SEGI_03319 Sequoiadendron giganteum HOM05D004724 ORTHO05D005734 9.4e-23 112.8 96 54.2
A07p12930 Brassica napus HOM05D004724 ORTHO05D005734 5.3e-18 97.1 69 62.3
BraA07t29066Z Brassica rapa HOM05D004724 ORTHO05D005734 5.3e-18 97.1 69 62.3
BolC7t42456H Brassica oleracea HOM05D004724 ORTHO05D005734 5.0e-16 90.5 69 59.4
Medtr1g009040 Medicago truncatula HOM05D004724 ORTHO05D005734 2.5e-15 88.2 162 35.8
Hma1.2p1_0477F.1_g160970 Hydrangea macrophylla HOM05D004724 ORTHO05D005734 5.2e-13 80.5 45 73.3
Hma1.2p1_1953F.1_g308830 Hydrangea macrophylla HOM05D004724 ORTHO05D005734 5.2e-13 80.5 45 73.3
Hma1.2p1_0820F.1_g223970 Hydrangea macrophylla HOM05D004724 ORTHO05D005734 1.5e-12 79.0 48 72.9
Nn4g24499 Nelumbo nucifera HOM05D000723 ORTHO05D278618 2.8e-11 74.7 96 47.9
Gohir.D12G165066 Gossypium hirsutum HOM05D004724 ORTHO05D005734 2.9e-08 64.7 52 53.8
BcaC06g35143 Brassica carinata HOM05D004724 ORTHO05D005734 6.5e-08 63.5 53 52.8
Sabra16G0092100 Salix brachista HOM05D000855 ORTHO05D008530 1.5e-07 62.4 389 21.1
CsaV3_3G035530 Cucumis sativus L. HOM05D000855 ORTHO05D008530 1.9e-07 62.0 393 22.6
MELO3C009312.2 Cucumis melo HOM05D000855 ORTHO05D008530 2.5e-07 61.6 388 22.2
Medtr1g066900 Medicago truncatula HOM05D000855 ORTHO05D008530 2.7e-06 58.2 135 27.4
Ca_22573_v3 Cicer arietinum L. HOM05D000300 ORTHO05D008589 6.1e-06 57.0 231 27.3


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