Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03099 Eucalyptus grandis HOM05D008138 ORTHO05D010043 6.4e-64 247.3 128 100.0
Thecc.02G319500 Theobroma cacao HOM05D008138 ORTHO05D010043 6.8e-13 77.8 89 44.9
Cpa.g.sc53.120 Carica papaya HOM05D008138 ORTHO05D010043 2.6e-12 75.9 108 40.7
Glyma.01G069000 Glycine max HOM05D008138 ORTHO05D010043 2.6e-12 75.9 108 36.1
GSVIVG01010138001 Vitis vinifera HOM05D008138 ORTHO05D010043 9.8e-12 73.9 91 44.0
ClCG05G023400 Citrullus lanatus HOM05D008138 ORTHO05D010043 1.1e-10 70.5 89 44.9
Glyma.02G125900 Glycine max HOM05D008138 ORTHO05D010043 1.1e-10 70.5 89 39.3
Sed0002378 Sechium edule HOM05D008138 ORTHO05D010043 1.1e-10 70.5 90 43.3
Lj2g0015438 Lotus japonicus HOM05D008138 ORTHO05D010043 4.1e-10 68.6 89 41.6
GSVIVG01010131001 Vitis vinifera HOM05D008138 ORTHO05D010043 4.1e-10 68.6 97 43.3
Potri.013G126000 Populus trichocarpa HOM05D008138 ORTHO05D010043 3.5e-09 65.5 82 43.9
QL10p055344 Quercus lobata HOM05D008138 ORTHO05D010043 4.5e-09 65.1 96 40.6
CSS0008104 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.2e-08 62.8 97 40.2
CSS0025185 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.2e-08 62.8 106 36.8
CSS0030227 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.2e-08 62.8 106 36.8
TAR629G0219 Trochodendron aralioides HOM05D008138 ORTHO05D010043 2.2e-08 62.8 99 35.4
CSS0008280 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.8e-08 62.0 97 39.2
Nn3g17583 Nelumbo nucifera HOM05D008138 ORTHO05D010043 5.0e-08 61.6 83 39.8
Sabra13G0105400 Salix brachista HOM05D008138 ORTHO05D010043 5.0e-08 61.6 93 40.9
CSS0039010 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.1e-07 60.5 95 38.9
Dinv01548 Davidia involucrata HOM05D008138 ORTHO05D010043 1.5e-07 60.1 87 40.2
TPR.G2576 Trifolium pratense HOM05D008138 ORTHO05D010043 1.5e-07 60.1 90 35.6
CSS0048436 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.5e-07 59.3 97 38.1
CSS0022599 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.2e-07 58.9 106 35.8
QL08p042110 Quercus lobata HOM05D008138 ORTHO05D010043 3.2e-07 58.9 84 38.1
Nn4g23585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 4.2e-07 58.5 84 40.5
CSS0004656 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 5.5e-07 58.2 97 38.1
QL10p055198 Quercus lobata HOM05D008138 ORTHO05D010043 7.2e-07 57.8 95 34.7
CSS0015628 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 9.4e-07 57.4 104 36.5
Nn3g17585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 9.4e-07 57.4 93 39.8
QL10p055072 Quercus lobata HOM05D008138 ORTHO05D010043 9.4e-07 57.4 96 34.4
QL10p055339 Quercus lobata HOM05D008138 ORTHO05D010043 1.2e-06 57.0 84 39.3
CSS0046654 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.1e-06 56.2 97 37.1
Dinv16583 Davidia involucrata HOM05D008138 ORTHO05D010043 2.1e-06 56.2 75 46.7
Cpa.g.sc9.360 Carica papaya HOM05D008138 ORTHO05D010043 4.7e-06 55.1 92 29.3
Manes.04G036300 Manihot esculenta HOM05D008138 ORTHO05D010043 4.7e-06 55.1 94 37.2


User provided reference genes

Program Settings