Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 1.6e-152 542.7 272 100.0
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 5.5e-97 358.2 273 68.1
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 1.2e-96 357.1 273 65.9
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 6.1e-96 354.8 272 64.0
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 8.8e-95 350.9 272 66.5
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 7.4e-94 347.8 272 66.5
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 2.2e-93 346.3 250 67.6
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 3.7e-93 345.5 272 66.5
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 3.7e-93 345.5 272 66.5
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 2.4e-92 342.8 275 66.2
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 3.1e-92 342.4 271 64.9
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 4.5e-91 338.6 272 64.3
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 7.7e-91 337.8 272 64.3
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 2.9e-90 335.9 272 64.3
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 6.5e-90 334.7 272 64.0
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 8.5e-90 334.3 273 64.1
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 7.2e-89 331.3 272 60.7
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 4.0e-87 325.5 273 62.6
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 2.6e-86 322.8 272 59.9
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 8.2e-85 317.8 274 60.2
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 1.1e-84 317.4 273 61.5
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 1.4e-84 317.0 275 59.3
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 1.8e-84 316.6 274 60.2
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 1.8e-84 316.6 275 60.0
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 4.5e-83 312.0 240 66.2
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 1.3e-82 310.5 273 61.5
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 1.7e-82 310.1 275 60.7
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 5.0e-82 308.5 273 60.8
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 6.5e-82 308.1 273 60.4
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 1.1e-81 307.4 272 60.3
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 4.2e-81 305.4 273 60.1
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 5.5e-81 305.1 257 60.3
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 5.5e-81 305.1 275 59.3
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 7.2e-81 304.7 273 60.8
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 1.2e-80 303.9 272 58.8
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 1.2e-80 303.9 272 57.4
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 4.7e-80 302.0 276 59.1
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 1.5e-78 297.0 272 58.8
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 1.5e-78 297.0 276 58.3
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 2.0e-78 296.6 274 56.9
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 2.6e-78 296.2 273 58.6
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 4.4e-78 295.4 274 57.3
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 2.2e-77 293.1 274 55.5
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 6.3e-77 291.6 276 57.6
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 8.3e-77 291.2 272 55.9
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 1.8e-76 290.0 276 58.0
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 1.8e-76 290.0 276 58.0
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 2.4e-76 289.7 273 57.5
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 2.4e-76 289.7 274 56.2
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 3.1e-76 289.3 250 58.8
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 7.0e-76 288.1 272 55.5
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 1.6e-75 287.0 278 57.2
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 1.6e-75 287.0 278 57.2
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 2.0e-75 286.6 262 58.4
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 2.0e-75 286.6 273 56.8
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 2.7e-75 286.2 272 58.8
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 2.7e-75 286.2 272 57.0
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 4.5e-75 285.4 272 54.4
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 1.0e-74 284.3 275 54.9
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 3.8e-74 282.3 240 59.6
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 5.0e-74 282.0 273 54.6
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 1.1e-73 280.8 272 55.9
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 1.9e-73 280.0 272 55.1
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 1.9e-73 280.0 274 56.9
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 1.6e-72 276.9 266 55.3
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 2.7e-72 276.2 272 53.7
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 2.7e-72 276.2 272 56.2
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 4.7e-72 275.4 274 56.6
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 4.7e-72 275.4 274 56.6
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 2.3e-71 273.1 273 54.9
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 3.0e-71 272.7 277 54.9
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 4.0e-71 272.3 280 55.0
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 1.5e-70 270.4 273 54.2
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 7.5e-70 268.1 278 52.9
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 2.8e-69 266.2 281 53.0
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 2.8e-69 266.2 273 53.8
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 3.1e-68 262.7 236 59.3
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 3.1e-68 262.7 266 54.9
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 5.0e-66 255.4 239 55.2
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 6.6e-66 255.0 277 53.4
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 4.3e-65 252.3 280 52.9
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 2.8e-64 249.6 219 60.3
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 3.0e-63 246.1 215 59.1
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 1.5e-62 243.8 276 50.0
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 1.1e-60 237.7 194 61.9
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 1.2e-56 224.2 271 46.5
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 1.8e-55 220.3 257 49.8
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 2.3e-55 219.9 273 48.4
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 4.0e-55 219.2 270 45.2
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 5.2e-55 218.8 240 53.8
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 2.2e-53 213.4 272 48.2
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 4.9e-53 212.2 270 44.8
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 1.1e-52 211.1 278 47.5
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 5.4e-52 208.8 275 44.7
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 6.6e-50 201.8 272 44.1
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 6.6e-50 201.8 272 44.1
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 1.1e-49 201.1 273 46.2
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 1.9e-49 200.3 240 46.2
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 2.1e-48 196.8 246 47.2
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 2.8e-48 196.4 199 55.3
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 6.2e-48 195.3 274 43.1
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 2.0e-46 190.3 258 41.5
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 7.1e-44 181.8 275 41.8
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 3.6e-40 169.5 253 42.3
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 9.9e-38 161.4 203 45.8
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 2.2e-37 160.2 203 45.3
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 2.7e-35 153.3 239 38.9
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 2.4e-28 130.2 228 38.2
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 2.3e-26 123.6 90 66.7
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 1.3e-24 117.9 251 36.3
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 3.1e-23 113.2 224 37.5
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 4.0e-23 112.8 156 42.3
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 5.8e-22 109.0 229 33.6
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 3.8e-21 106.3 106 50.9
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 6.4e-21 105.5 220 35.9
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 1.9e-20 104.0 88 55.7
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 5.1e-18 95.9 110 46.4
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 7.4e-17 92.0 106 45.3
Cre01.g037650 Chlamydomonas reinhardtii HOM05D006853 ORTHO05D008906 9.3e-12 75.1 174 32.8
BraA09t38070Z Brassica rapa HOM05D006853 ORTHO05D008906 9.6e-09 65.1 40 75.0
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 1.3e-08 64.7 53 52.8
GSVIVG01017445001 Vitis vinifera HOM05D000518 ORTHO05D001974 8.1e-08 62.0 62 46.8


User provided reference genes

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