Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 3.0e-176 621.7 310 100.0
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.0e-123 447.2 312 73.7
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 3.0e-123 445.7 311 73.3
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 3.0e-123 445.7 312 71.5
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 3.9e-123 445.3 313 73.5
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 8.7e-123 444.1 312 73.1
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.9e-122 443.0 311 72.7
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 4.3e-122 441.8 312 72.4
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 3.1e-120 435.6 311 71.4
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 4.0e-120 435.3 310 69.0
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 5.3e-120 434.9 308 71.1
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 2.6e-119 432.6 310 70.0
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 2.6e-119 432.6 316 71.2
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 3.4e-119 432.2 309 69.6
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 4.5e-119 431.8 316 69.6
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 5.8e-119 431.4 310 70.0
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 1.3e-118 430.3 310 69.0
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 1.7e-118 429.9 294 73.1
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 2.2e-118 429.5 313 68.7
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 3.8e-118 428.7 307 70.4
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 1.1e-117 427.2 311 68.5
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 5.5e-117 424.9 316 69.9
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.6e-116 423.3 311 68.2
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 1.3e-115 420.2 310 70.0
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 3.3e-114 415.6 363 60.3
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 9.6e-114 414.1 307 69.7
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.6e-113 413.3 342 62.9
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 1.6e-113 413.3 314 67.2
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 8.2e-113 411.0 308 67.5
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 1.1e-112 410.6 311 65.6
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.8e-112 409.8 312 67.0
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 3.1e-112 409.1 295 69.5
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 4.0e-112 408.7 295 69.5
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 5.3e-112 408.3 268 73.1
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 1.2e-111 407.1 266 73.7
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 2.0e-111 406.4 279 69.9
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 2.0e-111 406.4 264 72.7
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 2.6e-111 406.0 311 65.3
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 2.6e-111 406.0 255 76.5
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 3.4e-111 405.6 257 74.3
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 4.5e-111 405.2 256 74.2
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 5.8e-111 404.8 257 74.3
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 1.0e-110 404.1 292 70.5
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 1.0e-110 404.1 313 67.7
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 1.7e-110 403.3 372 57.5
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 3.8e-110 402.1 296 69.6
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 6.5e-110 401.4 315 65.7
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 6.5e-110 401.4 272 73.5
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.1e-109 400.6 292 69.9
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 1.4e-109 400.2 265 74.3
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 2.5e-109 399.4 257 73.9
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 3.2e-109 399.1 311 65.6
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 4.2e-109 398.7 263 74.9
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 4.2e-109 398.7 313 62.6
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 4.2e-109 398.7 254 73.6
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 5.5e-109 398.3 311 64.6
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 9.3e-109 397.5 297 68.4
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 2.1e-108 396.4 297 69.0
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 2.1e-108 396.4 254 74.8
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 2.7e-108 396.0 254 72.0
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 2.7e-108 396.0 297 68.4
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 6.0e-108 394.8 291 68.4
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 7.9e-108 394.4 291 68.0
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 7.9e-108 394.4 297 67.7
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 1.0e-107 394.0 315 62.2
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 1.0e-107 394.0 252 75.0
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 1.8e-107 393.3 261 72.8
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 1.8e-107 393.3 291 67.7
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 1.8e-107 393.3 310 65.2
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 2.3e-107 392.9 297 68.4
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 3.9e-107 392.1 307 66.1
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 1.5e-106 390.2 295 67.8
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.5e-106 390.2 255 72.5
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 1.9e-106 389.8 312 62.8
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 1.1e-104 384.0 311 64.3
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 2.4e-104 382.9 320 63.4
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 2.4e-104 382.9 312 62.5
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 1.5e-103 380.2 268 70.5
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 2.6e-103 379.4 261 71.6
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 7.6e-103 377.9 269 67.7
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 1.7e-102 376.7 291 63.9
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 2.9e-102 375.9 323 61.0
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 5.0e-102 375.2 267 69.7
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 6.5e-102 374.8 258 69.8
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 1.0e-99 367.5 256 71.5
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 3.9e-99 365.5 302 62.3
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 8.2e-97 357.8 293 61.8
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 2.0e-95 353.2 294 60.9
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 2.6e-95 352.8 378 51.3
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 5.5e-93 345.1 312 61.2
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 1.2e-92 344.0 266 63.9
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.7e-89 333.6 206 77.7
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 4.1e-88 328.9 261 64.0
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 2.1e-84 316.6 256 59.0
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 8.8e-83 311.2 310 51.0
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 3.3e-82 309.3 249 63.5
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 2.8e-81 306.2 235 60.4
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 4.0e-75 285.8 269 57.2
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 4.8e-73 278.9 238 56.3
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 1.4e-72 277.3 296 52.4
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 2.4e-72 276.6 192 71.4
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.6e-68 263.8 157 75.2
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 9.1e-64 248.1 162 70.4
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 1.9e-61 240.4 147 76.9
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 1.3e-57 227.6 134 79.1
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 4.1e-56 222.6 134 79.1
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 1.7e-54 217.2 135 78.5
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 1.7e-49 200.7 255 42.0
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 8.0e-44 181.8 136 61.8
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 3.5e-39 166.4 97 81.4
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 3.0e-38 163.3 191 46.1
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 2.5e-29 133.7 265 32.8
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 6.2e-28 129.0 275 31.3
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 1.2e-26 124.8 269 33.8
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 9.3e-16 88.6 88 51.1
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.7e-14 84.3 97 50.5


User provided reference genes

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