Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 3.5e-214 748.0 381 100.0
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 4.8e-147 525.0 381 70.6
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 3.3e-140 502.3 381 66.4
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 9.6e-140 500.7 380 66.1
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 9.0e-138 494.2 381 63.5
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 1.9e-135 486.5 365 66.8
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 9.3e-135 484.2 381 63.5
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 2.1e-134 483.0 357 68.1
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 3.5e-134 482.3 381 63.3
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 6.0e-134 481.5 376 64.4
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 7.9e-134 481.1 381 63.0
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 3.0e-133 479.2 382 64.1
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 8.7e-133 477.6 382 63.4
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 2.5e-132 476.1 381 62.7
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 3.3e-132 475.7 383 62.9
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 2.8e-131 472.6 355 65.9
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 3.1e-130 469.2 381 62.7
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 2.6e-129 466.1 381 61.9
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 3.4e-129 465.7 358 65.9
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 4.5e-129 465.3 380 61.8
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 2.2e-128 463.0 366 64.5
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 1.8e-125 453.4 382 60.7
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 3.0e-125 452.6 381 60.4
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 5.7e-124 448.4 378 61.9
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 8.2e-123 444.5 382 59.7
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 2.4e-122 443.0 380 59.5
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 1.5e-121 440.3 380 60.8
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 4.5e-121 438.7 382 57.1
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 1.0e-120 437.6 382 59.2
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 2.9e-120 436.0 379 58.8
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 1.0e-117 427.6 381 57.5
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 2.3e-117 426.4 381 57.2
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 1.1e-116 424.1 379 55.9
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 7.4e-116 421.4 366 59.0
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 4.8e-115 418.7 380 57.1
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 1.1e-114 417.5 380 57.1
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 1.4e-114 417.2 381 54.9
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 3.1e-114 416.0 380 56.1
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 4.1e-114 415.6 378 54.0
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 4.1e-114 415.6 381 55.9
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 9.1e-114 414.5 381 56.2
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 1.5e-113 413.7 321 64.2
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 4.5e-113 412.1 381 55.4
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 2.5e-111 406.4 359 57.1
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 3.2e-111 406.0 381 55.4
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 2.7e-110 402.9 339 61.9
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 1.4e-109 400.6 382 54.5
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 8.8e-109 397.9 385 55.1
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 4.4e-108 395.6 381 54.1
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 2.8e-107 392.9 381 53.0
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 1.1e-106 391.0 384 53.1
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 1.8e-106 390.2 383 53.3
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 5.3e-106 388.7 369 56.1
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 3.5e-105 386.0 366 51.9
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 4.7e-102 375.6 381 52.8
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 2.6e-97 359.8 382 49.2
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 3.5e-97 359.4 378 49.2
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 7.7e-97 358.2 383 50.4
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 1.0e-96 357.8 380 48.4
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 1.7e-96 357.1 380 48.4
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 3.8e-96 355.9 378 50.3
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 8.5e-96 354.8 354 54.0
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 1.5e-95 354.0 302 59.3
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 1.9e-95 353.6 368 48.9
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 9.4e-95 351.3 269 66.2
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 2.3e-93 346.7 405 45.7
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 5.2e-93 345.5 385 51.7
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 5.2e-93 345.5 265 65.3
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 6.3e-91 338.6 382 48.2
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 1.1e-90 337.8 382 47.6
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 4.5e-89 332.4 364 47.8
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 9.4e-87 324.7 383 48.0
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 2.7e-86 323.2 263 61.6
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 6.8e-85 318.5 365 47.1
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 2.6e-84 316.6 383 47.5
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 5.7e-84 315.5 374 47.1
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 1.4e-82 310.8 374 46.8
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 7.0e-82 308.5 381 46.7
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 2.0e-81 307.0 381 45.4
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 4.5e-81 305.8 374 46.3
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 1.6e-78 297.4 474 38.8
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 1.0e-77 294.7 382 44.8
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 1.0e-77 294.7 383 43.6
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 6.8e-77 292.0 264 56.8
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 6.8e-77 292.0 381 44.9
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 1.8e-74 283.9 382 41.4
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 5.2e-69 265.8 259 53.3
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 3.4e-68 263.1 368 42.1
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 1.1e-66 258.1 238 59.2
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 5.8e-60 235.7 381 39.4
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 3.0e-56 223.4 378 37.0
BcaC06g31117 Brassica carinata HOM05D007389 ORTHO05D009400 3.1e-53 213.4 372 36.8
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 4.1e-50 203.0 372 36.0
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 4.6e-49 199.5 370 35.7
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 7.3e-47 192.2 265 40.0
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 6.0e-41 172.6 145 58.6
QL01p044810 Quercus lobata HOM05D007389 ORTHO05D009400 5.6e-39 166.0 117 66.7
BcaC06g33956 Brassica carinata HOM05D007389 ORTHO05D009400 9.0e-37 158.7 373 32.2
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.2e-36 158.3 134 60.4
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 2.0e-36 157.5 207 43.0
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 2.7e-33 147.1 324 34.0
PSO782G3111 Papaver somniferum HOM05D007389 ORTHO05D009400 1.7e-32 144.4 168 47.6
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 3.3e-31 140.2 308 32.8
Lalb_Chr04g0254881 Lupinus albus HOM05D007389 ORTHO05D009400 3.3e-31 140.2 114 58.8
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 3.2e-26 123.6 179 43.0
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 8.7e-24 115.5 150 42.0
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 8.1e-22 109.0 115 51.3
MCO11G211 Micromonas commoda HOM05D007389 ORTHO05D009400 1.1e-21 108.6 213 33.3
SalBow8G3870 Salvia bowleyana HOM05D007389 ORTHO05D009400 2.9e-19 100.5 98 54.1


User provided reference genes

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