Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 0.0e+00 1601.6 851 100.0
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 1.9e-305 1052.4 838 68.0
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 1.3e-301 1039.6 792 69.6
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 2.0e-299 1032.3 800 68.4
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 5.0e-298 1027.7 859 65.8
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 5.8e-294 1014.2 858 64.6
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 2.9e-293 1011.9 852 64.7
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 3.7e-293 1011.5 856 64.6
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 1.2e-291 1006.5 863 64.7
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 6.0e-291 1004.2 871 62.9
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 1.0e-290 1003.4 803 67.0
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 5.1e-290 1001.1 826 66.5
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 3.6e-288 995.0 857 64.2
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 6.2e-288 994.2 862 65.3
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 1.4e-287 993.0 855 63.2
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 3.1e-287 991.9 855 64.1
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 4.4e-286 988.0 870 63.0
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 5.8e-286 987.6 867 63.6
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 3.8e-285 984.9 893 62.7
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 6.4e-285 984.2 751 69.4
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 4.1e-284 981.5 809 65.5
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 4.1e-284 981.5 795 66.9
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 2.1e-283 979.2 808 65.8
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 1.5e-278 963.0 851 62.3
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 2.6e-278 962.2 793 65.6
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 4.9e-277 958.0 860 62.0
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.4e-276 956.4 774 66.5
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 2.1e-275 952.6 847 62.3
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 6.0e-275 951.0 797 64.9
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 5.6e-273 944.5 812 64.0
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.8e-271 939.5 807 64.8
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 4.5e-270 934.9 801 63.7
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 2.2e-269 932.6 775 65.3
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 4.9e-269 931.4 774 65.8
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 6.4e-269 931.0 799 64.0
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 3.2e-268 928.7 827 62.3
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 7.4e-265 917.5 717 68.6
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 6.2e-264 914.4 811 61.4
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 4.3e-257 891.7 835 59.8
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 6.2e-256 887.9 821 61.3
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 1.1e-255 887.1 816 61.0
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 6.9e-255 884.4 800 61.0
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 9.0e-255 884.0 846 58.9
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 2.0e-254 882.9 844 59.4
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 2.0e-254 882.9 842 59.9
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 8.4e-253 877.5 847 59.0
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 2.5e-252 875.9 853 59.0
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 4.2e-252 875.2 829 59.6
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 5.5e-252 874.8 865 59.0
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 9.3e-252 874.0 807 61.3
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 1.6e-251 873.2 837 58.9
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 1.0e-250 870.5 847 58.3
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 8.7e-250 867.5 860 58.4
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 1.5e-249 866.7 799 60.5
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 4.3e-249 865.1 814 60.2
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 1.3e-248 863.6 799 60.1
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 1.3e-248 863.6 799 60.1
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 2.2e-248 862.8 790 60.8
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 6.3e-248 861.3 791 60.8
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 1.9e-244 849.7 809 58.2
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 4.2e-244 848.6 802 59.7
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 2.1e-243 846.3 773 59.9
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 7.9e-243 844.3 797 58.7
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 8.8e-242 840.9 813 58.3
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 2.2e-240 836.3 797 58.5
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 6.3e-240 834.7 860 55.3
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 1.4e-239 833.6 786 58.4
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 1.8e-239 833.2 758 62.1
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 4.1e-239 832.0 755 61.1
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 2.0e-238 829.7 786 58.5
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 2.6e-238 829.3 809 58.0
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 5.0e-237 825.1 812 57.1
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 1.6e-235 820.1 866 56.6
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 3.3e-233 812.4 915 51.9
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 6.3e-232 808.1 763 58.5
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 3.5e-230 802.4 897 55.1
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 2.9e-229 799.3 699 63.1
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 1.6e-227 793.5 843 54.6
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 2.3e-226 789.6 879 53.1
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 4.4e-225 785.4 755 58.8
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 4.4e-225 785.4 836 55.5
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 5.5e-220 768.5 717 59.0
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 1.6e-203 713.8 828 50.5
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 6.8e-202 708.4 731 54.0
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 5.9e-198 695.3 783 52.7
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 7.8e-198 694.9 800 49.6
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 7.3e-196 688.3 546 67.9
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 5.4e-183 645.6 496 68.3
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 2.8e-179 633.3 828 46.7
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 3.1e-178 629.8 594 58.9
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 2.1e-174 617.1 867 47.3
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 2.3e-173 613.6 584 58.0
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 6.4e-168 595.5 717 50.2
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.0e-165 588.2 517 62.3
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 4.3e-164 582.8 499 61.1
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 1.5e-161 574.3 639 53.4
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 1.5e-161 574.3 578 56.1
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 4.2e-151 539.7 481 59.7
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 1.0e-149 535.0 584 53.4
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 5.6e-148 529.3 481 59.3
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 5.3e-130 469.5 865 40.2
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 1.2e-118 431.8 792 36.4
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 5.0e-104 383.3 795 35.7
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 7.0e-90 336.3 282 64.9
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 4.4e-84 317.0 399 44.4
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 2.8e-78 297.7 227 68.3
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.8e-77 295.0 236 65.7
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 9.2e-74 282.7 205 72.7
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 2.0e-73 281.6 621 33.2
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 2.7e-65 254.6 279 52.3
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 5.1e-64 250.4 860 28.5
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 3.3e-63 247.7 269 53.5
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 7.3e-55 219.9 872 26.6
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 1.3e-22 112.8 154 49.4
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 4.2e-18 97.8 143 42.0
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 1.8e-16 92.4 110 49.1
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 1.5e-15 89.4 95 54.7
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 3.1e-13 81.6 68 61.8
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 5.5e-10 70.9 129 38.8


User provided reference genes

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