Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B02866 Eucalyptus grandis HOM05D004794 ORTHO05D005875 3.9e-202 708.0 370 100.0
PGR102G0643 Punica granatum HOM05D004794 ORTHO05D005875 2.9e-141 505.8 371 75.5
QL01p003046 Quercus lobata HOM05D004794 ORTHO05D005875 3.8e-141 505.4 371 76.3
Ciclev10015744m.g Citrus clementina HOM05D004794 ORTHO05D005875 1.4e-140 503.4 375 74.9
Cfa015814 Carpinus fangiana HOM05D004794 ORTHO05D005875 2.7e-139 499.2 371 76.5
CiPaw.05G245300 Carya illinoinensis HOM05D004794 ORTHO05D005875 1.3e-138 496.9 376 75.0
Atru.chr11.341 Acer truncatum HOM05D004794 ORTHO05D005875 3.3e-137 492.3 375 75.7
Thecc.02G215600 Theobroma cacao HOM05D004794 ORTHO05D005875 1.4e-135 486.9 372 73.9
Gorai.008G158400 Gossypium raimondii HOM05D004794 ORTHO05D005875 2.4e-135 486.1 372 73.7
Gohir.D12G147200 Gossypium hirsutum HOM05D004794 ORTHO05D005875 3.1e-135 485.7 372 73.7
Nn4g24023 Nelumbo nucifera HOM05D004794 ORTHO05D005875 4.1e-135 485.3 371 73.3
Atru.chr11.334 Acer truncatum HOM05D004794 ORTHO05D005875 5.3e-135 485.0 374 75.1
Gohir.A12G142300 Gossypium hirsutum HOM05D004794 ORTHO05D005875 5.3e-135 485.0 372 73.9
Manes.14G109500 Manihot esculenta HOM05D004794 ORTHO05D005875 2.0e-134 483.0 375 73.9
Dinv16165 Davidia involucrata HOM05D004794 ORTHO05D005875 4.5e-134 481.9 373 73.7
Aqoxy5G03876 Aquilegia oxysepala HOM05D004794 ORTHO05D005875 1.0e-133 480.7 373 72.9
TAR374G0638 Trochodendron aralioides HOM05D004794 ORTHO05D005875 1.3e-133 480.3 356 75.6
Potri.010G117200 Populus trichocarpa HOM05D004794 ORTHO05D005875 1.7e-133 479.9 366 73.2
GSVIVG01011805001 Vitis vinifera HOM05D004794 ORTHO05D005875 2.2e-133 479.6 382 72.5
MBI16_g29821_MAGBIO Magnolia biondii HOM05D004794 ORTHO05D005875 2.5e-132 476.1 374 71.1
THA.LOC104805049 Tarenaya hassleriana HOM05D004794 ORTHO05D005875 4.2e-132 475.3 377 72.9
vmacro01423 Vaccinium macrocarpon HOM05D004794 ORTHO05D005875 4.2e-132 475.3 372 73.1
Actinidia31991 Actinidia chinensis HOM05D004794 ORTHO05D005875 2.1e-131 473.0 371 73.0
Haze_00684 Corylus avellana HOM05D004794 ORTHO05D005875 2.7e-131 472.6 373 73.7
TWI75G0950 Tripterygium wilfordii HOM05D004794 ORTHO05D005875 2.7e-131 472.6 371 74.1
Prupe.1G320000 Prunus persica HOM05D004794 ORTHO05D005875 1.4e-130 470.3 371 70.4
Manes.06G063100 Manihot esculenta HOM05D004794 ORTHO05D005875 1.8e-130 469.9 378 71.4
Hma1.2p1_0114F.1_g055470 Hydrangea macrophylla HOM05D004794 ORTHO05D005875 2.3e-130 469.5 372 71.2
Glyma.10G268000 Glycine max HOM05D004794 ORTHO05D005875 3.0e-130 469.2 336 77.1
TAR622G1294 Trochodendron aralioides HOM05D004794 ORTHO05D005875 8.8e-130 467.6 305 81.6
Lalb_Chr02g0145631 Lupinus albus HOM05D004794 ORTHO05D005875 1.5e-129 466.8 305 81.0
Dinv04904 Davidia involucrata HOM05D004794 ORTHO05D005875 2.0e-129 466.5 370 71.1
Phvul.007G034300 Phaseolus vulgaris HOM05D004794 ORTHO05D005875 7.4e-129 464.5 350 73.1
TWI79G0577 Tripterygium wilfordii HOM05D004794 ORTHO05D005875 7.4e-129 464.5 370 73.0
Glyma.20G123100 Glycine max HOM05D004794 ORTHO05D005875 1.3e-128 463.8 335 77.6
Sabra10G0086800 Salix brachista HOM05D004794 ORTHO05D005875 1.7e-128 463.4 407 64.4
Sabra10G0088400 Salix brachista HOM05D004794 ORTHO05D005875 1.7e-128 463.4 407 64.4
arahy.Tifrunner.gnm1.ann1.B80FEM Arachis hypogaea HOM05D004794 ORTHO05D005875 4.8e-128 461.8 336 75.9
Lj3A877T98 Lonicera japonica HOM05D004794 ORTHO05D005875 4.8e-128 461.8 372 70.7
Hund25018 Selenicereus undatus HOM05D004794 ORTHO05D005875 4.8e-128 461.8 365 72.9
Sed0004857 Sechium edule HOM05D004794 ORTHO05D005875 6.3e-128 461.5 366 73.5
Medtr1g109080 Medicago truncatula HOM05D004794 ORTHO05D005875 1.1e-127 460.7 336 73.5
Sc04g0005890 Simmondsia chinensis HOM05D004794 ORTHO05D005875 1.1e-127 460.7 305 80.3
CANSAT01G0565 Cannabis sativa HOM05D004794 ORTHO05D005875 1.4e-127 460.3 383 68.9
ClCG05G022340 Citrullus lanatus HOM05D004794 ORTHO05D005875 1.4e-127 460.3 371 72.0
Psat6g222720 Pisum sativum HOM05D004794 ORTHO05D005875 1.8e-127 459.9 317 76.3
Lalb_Chr06g0165741 Lupinus albus HOM05D004794 ORTHO05D005875 2.4e-127 459.5 305 80.0
Lj5g0022431 Lotus japonicus HOM05D004794 ORTHO05D005875 3.1e-127 459.1 343 74.6
Duzib251G0273 Durio zibethinus HOM05D004794 ORTHO05D005875 4.1e-127 458.8 372 70.4
Aa31sc79G60 Aethionema arabicum HOM05D004794 ORTHO05D005875 6.9e-127 458.0 302 80.1
arahy.Tifrunner.gnm1.ann1.9SFQ4R Arachis hypogaea HOM05D004794 ORTHO05D005875 6.9e-127 458.0 336 75.3
CDE06G2233 Ceratophyllum demersum HOM05D004794 ORTHO05D005875 9.1e-127 457.6 309 78.0
MELO3C012288.2 Cucumis melo HOM05D004794 ORTHO05D005875 9.1e-127 457.6 371 71.2
FvH4_4g26390 Fragaria vesca HOM05D004794 ORTHO05D005875 9.1e-127 457.6 370 71.1
FAN12G0017 Fragaria x ananassa HOM05D004794 ORTHO05D005875 9.1e-127 457.6 370 71.1
FAN12G0914 Fragaria x ananassa HOM05D004794 ORTHO05D005875 9.1e-127 457.6 370 71.1
MD16G1034600 Malus domestica HOM05D004794 ORTHO05D005875 2.0e-126 456.4 371 69.3
AUR62002773 Chenopodium quinoa HOM05D004794 ORTHO05D005875 2.6e-126 456.1 381 68.8
CsaV3_5G034760 Cucumis sativus L. HOM05D004794 ORTHO05D005875 2.6e-126 456.1 371 70.9
ATR0691G049 Amborella trichopoda HOM05D004794 ORTHO05D005875 3.4e-126 455.7 318 76.7
FAN07G1519 Fragaria x ananassa HOM05D004794 ORTHO05D005875 5.9e-126 454.9 370 70.3
PSO445G0020 Papaver somniferum HOM05D004794 ORTHO05D005875 7.7e-126 454.5 376 68.4
Lsat_1_v5_gn_3_54000 Lactuca sativa HOM05D004794 ORTHO05D005875 1.7e-125 453.4 370 68.4
FAN22G0499 Fragaria x ananassa HOM05D004794 ORTHO05D005875 2.9e-125 452.6 370 70.3
RcHm_v2.0_Chr4g0434021 Rosa chinensis HOM05D004794 ORTHO05D005875 5.0e-125 451.8 371 68.7
SGA_v2.0_scaffold376G50295 Striga asiatica HOM05D004794 ORTHO05D005875 5.0e-125 451.8 362 69.1
MD13G1032500 Malus domestica HOM05D004794 ORTHO05D005875 6.5e-125 451.4 348 71.8
PSO170G3473 Papaver somniferum HOM05D004794 ORTHO05D005875 6.5e-125 451.4 376 67.8
FAN17G0450 Fragaria x ananassa HOM05D004794 ORTHO05D005875 1.1e-124 450.7 370 70.0
CAN.G1489.14 Capsicum annuum HOM05D004794 ORTHO05D005875 1.4e-124 450.3 370 69.7
Ah.03g138420 Amaranthus hybridus HOM05D004794 ORTHO05D005875 1.9e-124 449.9 310 77.1
Peaxi162Scf00205g01022 Petunia axillaris HOM05D004794 ORTHO05D005875 2.5e-124 449.5 356 73.3
HanXRQChr15g0477711 Helianthus annuus HOM05D004794 ORTHO05D005875 4.2e-124 448.7 371 68.7
Sp2g12580 Schrenkiella parvula HOM05D004794 ORTHO05D005875 4.2e-124 448.7 299 80.6
Solyc05g008530.3 Solanum lycopersicum HOM05D004794 ORTHO05D005875 4.2e-124 448.7 371 70.4
Sopen05g004370 Solanum pennellii HOM05D004794 ORTHO05D005875 5.5e-124 448.4 371 70.4
Nitab4.5_0013146g0030 Nicotiana tabacum HOM05D004794 ORTHO05D005875 7.2e-124 448.0 371 69.8
CSS0006530 Camellia sinensis var. sinensis HOM05D004794 ORTHO05D005875 9.4e-124 447.6 372 70.4
CDE07G0253 Ceratophyllum demersum HOM05D004794 ORTHO05D005875 1.2e-123 447.2 255 89.8
Ca_23704_v3 Cicer arietinum L. HOM05D004794 ORTHO05D005875 2.7e-123 446.0 360 69.4
Ca_30211_v3 Cicer arietinum L. HOM05D004794 ORTHO05D005875 2.7e-123 446.0 360 69.4
Nitab4.5_0000350g0140 Nicotiana tabacum HOM05D004794 ORTHO05D005875 2.7e-123 446.0 373 69.4
BcaC06g31333 Brassica carinata HOM05D004794 ORTHO05D005875 3.6e-123 445.7 380 68.2
PGSC0003DMG400030563 Solanum tuberosum HOM05D004794 ORTHO05D005875 4.7e-123 445.3 371 69.8
A02p31690 Brassica napus HOM05D004794 ORTHO05D005875 7.9e-123 444.5 369 69.1
BraA02t08175Z Brassica rapa HOM05D004794 ORTHO05D005875 7.9e-123 444.5 369 69.1
EL10Ac6g14275 Beta vulgaris HOM05D004794 ORTHO05D005875 1.0e-122 444.1 361 70.4
BcaB07g30424 Brassica carinata HOM05D004794 ORTHO05D005875 1.0e-122 444.1 376 68.4
BolC2t10997H Brassica oleracea HOM05D004794 ORTHO05D005875 1.0e-122 444.1 287 81.5
HanXRQChr01g0013251 Helianthus annuus HOM05D004794 ORTHO05D005875 2.3e-122 443.0 309 75.4
ECA246G3704 Erigeron canadensis HOM05D004794 ORTHO05D005875 3.0e-122 442.6 302 77.5
AT2G01110 Arabidopsis thaliana HOM05D004794 ORTHO05D005875 3.9e-122 442.2 287 81.5
Carub.0005s0009 Capsella rubella HOM05D004794 ORTHO05D005875 3.9e-122 442.2 373 68.9
BcaC03g16998 Brassica carinata HOM05D004794 ORTHO05D005875 6.7e-122 441.4 379 67.8
C02p49070 Brassica napus HOM05D004794 ORTHO05D005875 8.8e-122 441.0 369 68.0
Duzib268G0539 Durio zibethinus HOM05D004794 ORTHO05D005875 2.6e-121 439.5 375 67.2
Oeu029170.1 Olea europaea HOM05D004794 ORTHO05D005875 3.3e-121 439.1 372 65.9
AL5G10060 Arabidopsis lyrata HOM05D004794 ORTHO05D005875 4.4e-121 438.7 371 69.0
MSTRG.13564 Avicennia marina HOM05D004794 ORTHO05D005875 4.4e-121 438.7 372 66.7
A06p44670 Brassica napus HOM05D004794 ORTHO05D005875 4.4e-121 438.7 378 67.5
BraA06t27340Z Brassica rapa HOM05D004794 ORTHO05D005875 7.4e-121 438.0 378 67.2
CARHR143660 Cardamine hirsuta HOM05D004794 ORTHO05D005875 7.4e-121 438.0 349 70.8
Os01g0501700 Oryza sativa ssp. japonica HOM05D004794 ORTHO05D005875 7.4e-121 438.0 292 79.5
EL10Ac4g08742 Beta vulgaris HOM05D004794 ORTHO05D005875 1.7e-120 436.8 352 69.3
SalBow8G5373 Salvia bowleyana HOM05D004794 ORTHO05D005875 2.8e-120 436.0 370 66.5
HPP92_021566 Vanilla planifolia HOM05D004794 ORTHO05D005875 4.8e-120 435.3 297 76.8
BcaC06g34216 Brassica carinata HOM05D004794 ORTHO05D005875 6.3e-120 434.9 382 66.8
DCAR_007276 Daucus carota HOM05D004794 ORTHO05D005875 6.3e-120 434.9 250 87.2
HPP92_027135 Vanilla planifolia HOM05D004794 ORTHO05D005875 8.2e-120 434.5 297 76.8
C07p31580 Brassica napus HOM05D004794 ORTHO05D005875 1.1e-119 434.1 382 66.5
BolC7t43697H Brassica oleracea HOM05D004794 ORTHO05D005875 2.4e-119 433.0 382 66.5
Zm00001eb009240 Zea mays HOM05D004794 ORTHO05D005875 7.0e-119 431.4 315 74.3
Oeu048392.1 Olea europaea HOM05D004794 ORTHO05D005875 1.5e-118 430.3 254 84.3
Cc11_g09270 Coffea canephora HOM05D004794 ORTHO05D005875 2.6e-118 429.5 375 67.2
Migut.E00392 Erythranthe guttata HOM05D004794 ORTHO05D005875 2.6e-118 429.5 361 65.7
Lj6A750T92 Lonicera japonica HOM05D004794 ORTHO05D005875 5.0e-117 425.2 386 64.8
COL.COLO4_20120 Corchorus olitorius HOM05D004794 ORTHO05D005875 7.2e-116 421.4 246 88.2
Migut.L01019 Erythranthe guttata HOM05D004794 ORTHO05D005875 1.6e-115 420.2 310 73.2
SEGI_17562 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 3.6e-115 419.1 280 79.3
Rhsim12G0088300 Rhododendron simsii HOM05D004794 ORTHO05D005875 8.8e-114 414.5 325 71.7
AUR62037257 Chenopodium quinoa HOM05D004794 ORTHO05D005875 5.7e-113 411.8 470 55.5
Lsat_1_v5_gn_4_15760 Lactuca sativa HOM05D004794 ORTHO05D005875 9.7e-113 411.0 308 72.1
HPP92_020138 Vanilla planifolia HOM05D004794 ORTHO05D005875 6.3e-112 408.3 332 67.5
SalBow8G4147 Salvia bowleyana HOM05D004794 ORTHO05D005875 5.3e-111 405.2 340 66.2
DCAR_030186 Daucus carota HOM05D004794 ORTHO05D005875 1.7e-109 400.2 225 89.8
Thhalv10000946m.g Eutrema salsugineum HOM05D004794 ORTHO05D005875 5.0e-109 398.7 380 64.5
SMO119G0095 Selaginella moellendorffii HOM05D004794 ORTHO05D005875 1.9e-108 396.7 250 80.4
ECA234G2688 Erigeron canadensis HOM05D004794 ORTHO05D005875 2.5e-108 396.4 299 69.6
Pp3c3_36440 Physcomitrium patens HOM05D004794 ORTHO05D005875 5.5e-108 395.2 266 75.9
HanXRQChr17g0567091 Helianthus annuus HOM05D004794 ORTHO05D005875 2.7e-107 392.9 306 69.3
Pp3c8_3800 Physcomitrium patens HOM05D004794 ORTHO05D005875 2.3e-106 389.8 266 75.9
Mapoly0010s0061 Marchantia polymorpha HOM05D004794 ORTHO05D005875 3.0e-106 389.4 346 63.3
TPR.G4856 Trifolium pratense HOM05D004794 ORTHO05D005875 3.0e-106 389.4 260 76.5
AagrBONN_evm.TU.Sc2ySwM_368.2774 Anthoceros agrestis HOM05D004794 ORTHO05D005875 2.6e-105 386.3 355 62.8
CBR_g19219 Chara braunii HOM05D004794 ORTHO05D005875 6.3e-104 381.7 248 78.2
PRCOL_00000588 Prasinoderma coloniale HOM05D004794 ORTHO05D005875 1.2e-97 360.9 252 70.2
Zm00001eb399680 Zea mays HOM05D004794 ORTHO05D005875 3.5e-94 349.4 299 64.9
Oeu022847.1 Olea europaea HOM05D004794 ORTHO05D005875 3.0e-90 336.3 229 77.3
MCO02G003 Micromonas commoda HOM05D004794 ORTHO05D005875 2.0e-89 333.6 241 72.6
Cre03.g145887 Chlamydomonas reinhardtii HOM05D004794 ORTHO05D005875 7.5e-89 331.6 290 62.4
VMungo0720G1627 Vigna mungo HOM05D004794 ORTHO05D005875 1.3e-80 304.3 349 54.4
unitig_8.g3987 Utricularia gibba HOM05D000722 ORTHO05D000590 5.8e-65 252.3 266 57.1
A09p23220 Brassica napus HOM05D004794 ORTHO05D005875 9.6e-60 235.0 155 78.1
BraA09t37925Z Brassica rapa HOM05D004794 ORTHO05D005875 4.7e-59 232.6 155 77.4
BcaC03g16992 Brassica carinata HOM05D004794 ORTHO05D005875 1.3e-56 224.6 159 74.2
BolC2t10985H Brassica oleracea HOM05D004794 ORTHO05D005875 1.3e-56 224.6 159 74.2
Cpa.g.sc65.92 Carica papaya HOM05D004794 ORTHO05D005875 4.2e-47 193.0 108 93.5
SEGI_30482 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 8.7e-37 158.7 102 81.4
SEGI_31512 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 1.5e-36 157.9 99 82.8
C09p29960 Brassica napus HOM05D004794 ORTHO05D039171 7.6e-33 145.6 121 64.5
SEGI_19547 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 5.5e-31 139.4 117 65.0
BcaC04g21603 Brassica carinata HOM05D004794 ORTHO05D039171 9.0e-26 122.1 102 67.6
BolC9t55859H Brassica oleracea HOM05D004794 ORTHO05D005875 3.9e-21 106.7 64 89.1
unitig_8.g3988 Utricularia gibba HOM05D004794 ORTHO05D005875 3.9e-21 106.7 61 86.9


User provided reference genes

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