Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B02817 Eucalyptus grandis HOM05D007481 ORTHO05D009444 8.4e-145 516.9 248 100.0
CSS0016102 Camellia sinensis var. sinensis HOM05D007481 ORTHO05D009444 1.6e-106 389.8 249 74.3
CiPaw.10G156500 Carya illinoinensis HOM05D007481 ORTHO05D009444 7.7e-106 387.5 248 76.2
Potri.006G100100 Populus trichocarpa HOM05D007481 ORTHO05D009444 7.7e-106 387.5 250 74.8
Manes.09G104600 Manihot esculenta HOM05D007481 ORTHO05D009444 1.3e-105 386.7 246 75.6
Thecc.05G016400 Theobroma cacao HOM05D007481 ORTHO05D009444 3.8e-105 385.2 249 73.9
Dinv04699 Davidia involucrata HOM05D007481 ORTHO05D009444 8.5e-105 384.0 250 74.4
GSVIVG01033961001 Vitis vinifera HOM05D007481 ORTHO05D009444 1.1e-104 383.6 249 73.9
QL07p035708 Quercus lobata HOM05D007481 ORTHO05D009444 1.5e-104 383.3 247 74.5
Cc06_g01380 Coffea canephora HOM05D007481 ORTHO05D009444 4.2e-104 381.7 247 72.9
Gohir.D09G160700 Gossypium hirsutum HOM05D007481 ORTHO05D009444 7.2e-104 380.9 249 73.9
Prupe.6G277100 Prunus persica HOM05D007481 ORTHO05D009444 1.6e-103 379.8 247 72.9
Actinidia11588 Actinidia chinensis HOM05D007481 ORTHO05D009444 5.2e-102 374.8 249 72.3
COL.COLO4_14539 Corchorus olitorius HOM05D007481 ORTHO05D009444 8.8e-102 374.0 251 70.9
PGR031G3607 Punica granatum HOM05D007481 ORTHO05D009444 1.2e-101 373.6 243 74.1
MD04G1152000 Malus domestica HOM05D007481 ORTHO05D009444 1.5e-101 373.2 249 71.1
Sabra06G0076900 Salix brachista HOM05D007481 ORTHO05D009444 1.5e-101 373.2 250 72.0
CAN.G616.2 Capsicum annuum HOM05D007481 ORTHO05D009444 2.0e-101 372.9 247 70.0
Peaxi162Scf00009g01813 Petunia axillaris HOM05D007481 ORTHO05D009444 3.4e-101 372.1 247 69.2
RcHm_v2.0_Chr3g0463171 Rosa chinensis HOM05D007481 ORTHO05D009444 5.7e-101 371.3 248 71.4
MSTRG.10219 Avicennia marina HOM05D007481 ORTHO05D009444 1.7e-100 369.8 255 69.0
FAN05G5358 Fragaria x ananassa HOM05D007481 ORTHO05D009444 2.8e-100 369.0 248 71.4
CANSAT35G1044 Cannabis sativa HOM05D007481 ORTHO05D009444 3.7e-100 368.6 248 70.6
PGSC0003DMG400011097 Solanum tuberosum HOM05D007481 ORTHO05D009444 3.7e-100 368.6 247 68.4
Cfa017210 Carpinus fangiana HOM05D007481 ORTHO05D009444 1.1e-99 367.1 227 75.8
Sopen10g034630 Solanum pennellii HOM05D007481 ORTHO05D009444 1.4e-99 366.7 247 68.0
Migut.L02012 Erythranthe guttata HOM05D007481 ORTHO05D009444 1.8e-99 366.3 246 72.4
TWI74G0365 Tripterygium wilfordii HOM05D007481 ORTHO05D009444 1.8e-99 366.3 249 70.7
Gorai.006G182400 Gossypium raimondii HOM05D007481 ORTHO05D009444 3.1e-99 365.5 284 64.4
Solyc10g085160.2 Solanum lycopersicum HOM05D007481 ORTHO05D009444 1.2e-98 363.6 247 67.2
Nn2g13707 Nelumbo nucifera HOM05D007481 ORTHO05D009444 1.6e-98 363.2 248 69.8
HanXRQChr01g0007111 Helianthus annuus HOM05D007481 ORTHO05D009444 1.0e-97 360.5 248 70.6
Nitab4.5_0003666g0020 Nicotiana tabacum HOM05D007481 ORTHO05D009444 1.7e-97 359.8 247 68.4
ECA248G3524 Erigeron canadensis HOM05D007481 ORTHO05D009444 8.6e-97 357.5 247 70.0
Sed0020862 Sechium edule HOM05D007481 ORTHO05D009444 8.6e-97 357.5 249 68.7
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 8.6e-97 357.5 243 70.0
ClCG04G007010 Citrullus lanatus HOM05D007481 ORTHO05D009444 2.5e-96 355.9 248 69.4
CsaV3_4G026270 Cucumis sativus L. HOM05D007481 ORTHO05D009444 4.2e-96 355.1 249 70.3
Medtr4g012440 Medicago truncatula HOM05D007481 ORTHO05D009444 4.2e-96 355.1 250 70.4
Sc07g0006570 Simmondsia chinensis HOM05D007481 ORTHO05D009444 5.5e-96 354.8 250 68.4
Lj3g0018029 Lotus japonicus HOM05D007481 ORTHO05D009444 7.2e-96 354.4 246 70.3
CARHR211840 Cardamine hirsuta HOM05D007481 ORTHO05D009444 1.2e-95 353.6 250 69.2
Nitab4.5_0003024g0060 Nicotiana tabacum HOM05D007481 ORTHO05D009444 6.1e-95 351.3 261 65.1
Psat7g244960 Pisum sativum HOM05D007481 ORTHO05D009444 6.1e-95 351.3 245 69.0
arahy.Tifrunner.gnm1.ann1.7RHW31 Arachis hypogaea HOM05D007481 ORTHO05D009444 8.0e-95 350.9 245 70.6
Phvul.010G001400 Phaseolus vulgaris HOM05D007481 ORTHO05D009444 8.0e-95 350.9 249 70.3
Sp6g40760 Schrenkiella parvula HOM05D007481 ORTHO05D009444 8.0e-95 350.9 249 69.9
THA.LOC104816191 Tarenaya hassleriana HOM05D007481 ORTHO05D009444 8.0e-95 350.9 249 68.7
Ciclev10012584m.g Citrus clementina HOM05D007481 ORTHO05D009444 1.8e-94 349.7 247 66.8
FAN02G0465 Fragaria x ananassa HOM05D007481 ORTHO05D009444 1.8e-94 349.7 240 70.4
Aqoxy2G00902 Aquilegia oxysepala HOM05D007481 ORTHO05D009444 2.3e-94 349.4 244 68.9
Lalb_Chr07g0193571 Lupinus albus HOM05D007481 ORTHO05D009444 2.3e-94 349.4 246 69.5
Glyma.03G058200 Glycine max HOM05D007481 ORTHO05D009444 3.0e-94 349.0 248 69.4
Aa31LG1G23100 Aethionema arabicum HOM05D007481 ORTHO05D009444 5.2e-94 348.2 246 68.7
Thhalv10014504m.g Eutrema salsugineum HOM05D007481 ORTHO05D009444 1.5e-93 346.7 247 68.4
AL6G10600 Arabidopsis lyrata HOM05D007481 ORTHO05D009444 4.4e-93 345.1 247 67.6
Duzib093G0021 Durio zibethinus HOM05D007481 ORTHO05D009444 5.7e-93 344.7 206 78.6
Lj3A953G52 Lonicera japonica HOM05D007481 ORTHO05D009444 5.7e-93 344.7 246 68.3
PSO801G0715 Papaver somniferum HOM05D007481 ORTHO05D009444 9.8e-93 344.0 247 64.4
Ca_20231_v3 Cicer arietinum L. HOM05D007481 ORTHO05D009444 1.7e-92 343.2 247 68.0
TPR.G13336 Trifolium pratense HOM05D007481 ORTHO05D009444 3.7e-92 342.0 250 67.2
AT5G01470 Arabidopsis thaliana HOM05D007481 ORTHO05D009444 6.3e-92 341.3 247 66.8
Carub.0006s0036 Capsella rubella HOM05D007481 ORTHO05D009444 1.1e-91 340.5 244 66.8
BcaB05g21923 Brassica carinata HOM05D007481 ORTHO05D009444 1.4e-91 340.1 247 66.8
arahy.Tifrunner.gnm1.ann1.6XTR6T Arachis hypogaea HOM05D007481 ORTHO05D009444 1.2e-90 337.0 245 68.6
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 2.0e-90 336.3 264 62.1
C02p00150 Brassica napus HOM05D007481 ORTHO05D009444 2.0e-90 336.3 246 66.7
PSO339G5056 Papaver somniferum HOM05D007481 ORTHO05D009444 2.7e-90 335.9 247 64.8
BcaC03g13078 Brassica carinata HOM05D007481 ORTHO05D009444 3.5e-90 335.5 246 66.7
FAN14G0098 Fragaria x ananassa HOM05D007481 ORTHO05D009444 4.5e-90 335.1 308 56.5
BolC2t06012H Brassica oleracea HOM05D007481 ORTHO05D009444 2.3e-89 332.8 246 65.9
ATR0618G339 Amborella trichopoda HOM05D007481 ORTHO05D009444 3.8e-89 332.0 247 64.4
BraA02t04685Z Brassica rapa HOM05D007481 ORTHO05D009444 3.8e-89 332.0 246 65.9
unitig_736.g22787 Utricularia gibba HOM05D007481 ORTHO05D009444 1.9e-88 329.7 236 66.1
FAN09G2325 Fragaria x ananassa HOM05D007481 ORTHO05D009444 7.3e-88 327.8 248 65.7
vmacro20262 Vaccinium macrocarpon HOM05D007481 ORTHO05D009444 1.0e-86 323.9 253 66.8
Lsat_1_v5_gn_5_149561 Lactuca sativa HOM05D007481 ORTHO05D009444 2.6e-85 319.3 245 64.1
Rhsim05G0214800 Rhododendron simsii HOM05D007481 ORTHO05D009444 5.8e-85 318.2 303 53.8
Hund11009 Selenicereus undatus HOM05D007481 ORTHO05D009444 1.7e-84 316.6 272 59.6
Gohir.A09G165100 Gossypium hirsutum HOM05D007481 ORTHO05D009444 3.1e-78 295.8 187 75.4
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 1.2e-77 293.9 253 58.9
Haze_20985 Corylus avellana HOM05D007481 ORTHO05D009444 2.6e-77 292.7 254 61.4
Zm00001eb063270 Zea mays HOM05D007481 ORTHO05D009444 4.4e-77 292.0 253 56.9
SEGI_08492 Sequoiadendron giganteum HOM05D007481 ORTHO05D009444 1.3e-76 290.4 280 52.5
TAR633G1799 Trochodendron aralioides HOM05D007481 ORTHO05D009444 2.2e-76 289.7 248 58.9
SalBow4G1731 Salvia bowleyana HOM05D007481 ORTHO05D009444 2.1e-74 283.1 181 73.5
FvH4_6g11480 Fragaria vesca HOM05D007481 ORTHO05D009444 3.5e-74 282.3 185 73.5
MELO3C003292.2 Cucumis melo HOM05D007481 ORTHO05D009444 6.6e-73 278.1 178 74.2
Pp3c17_21930 Physcomitrium patens HOM05D007481 ORTHO05D009444 9.5e-72 274.2 276 51.4
Mapoly0103s0024 Marchantia polymorpha HOM05D007481 ORTHO05D009444 3.6e-71 272.3 272 52.2
CDE02G3625 Ceratophyllum demersum HOM05D007481 ORTHO05D009444 1.4e-70 270.4 182 73.1
Cpa.g.sc11.154 Carica papaya HOM05D007481 ORTHO05D009444 1.5e-69 266.9 252 57.9
AagrBONN_evm.TU.Sc2ySwM_228.1780 Anthoceros agrestis HOM05D007481 ORTHO05D009444 1.4e-67 260.4 212 59.9
SMO119G0350 Selaginella moellendorffii HOM05D007481 ORTHO05D009444 1.9e-67 260.0 210 60.5
CBR_g4113 Chara braunii HOM05D007481 ORTHO05D009444 7.1e-67 258.1 283 47.3
MBI14_g30737_MAGBIO Magnolia biondii HOM05D007481 ORTHO05D009444 9.9e-61 237.7 252 50.0
FAN14G2270 Fragaria x ananassa HOM05D000872 ORTHO05D000777 2.7e-58 229.6 291 46.0
DCAR_015418 Daucus carota HOM05D007481 ORTHO05D009444 6.2e-55 218.4 137 73.7
VMungo0331G0457 Vigna mungo HOM05D007481 ORTHO05D009444 1.7e-49 200.3 139 69.8
HPP92_003771 Vanilla planifolia HOM05D007481 ORTHO05D009444 5.3e-46 188.7 184 53.3
Atru.chr8.2241 Acer truncatum HOM05D007481 ORTHO05D009444 3.2e-43 179.5 116 70.7
Eucgr.B02818 Eucalyptus grandis HOM05D007481 ORTHO05D009444 4.6e-42 175.6 90 94.4
EL10Ac5g12562 Beta vulgaris HOM05D007481 ORTHO05D009444 1.5e-29 134.0 96 68.8
Oeu006297.1 Olea europaea HOM05D007481 ORTHO05D009444 1.7e-28 130.6 88 71.6
AUR62030437 Chenopodium quinoa HOM05D007481 ORTHO05D009444 7.7e-13 78.6 41 78.0
PSO675G1483 Papaver somniferum HOM05D006745 ORTHO05D008449 3.9e-09 66.2 127 32.3
PSO541G1183 Papaver somniferum HOM05D006745 ORTHO05D008449 1.3e-07 61.2 128 32.0
MCO11G671 Micromonas commoda HOM05D005677 ORTHO05D006966 1.4e-06 57.8 106 34.0
Mapoly0041s0084 Marchantia polymorpha HOM05D006745 ORTHO05D008449 1.8e-06 57.4 159 25.2


User provided reference genes

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