Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B02811 Eucalyptus grandis HOM05D003907 ORTHO05D004819 3.4e-273 944.5 517 100.0
GSVIVG01033959001 Vitis vinifera HOM05D003907 ORTHO05D004819 2.2e-248 862.1 494 90.7
Cfa017208 Carpinus fangiana HOM05D003907 ORTHO05D004819 3.0e-245 851.7 494 90.5
Ciclev10011517m.g Citrus clementina HOM05D003907 ORTHO05D004819 3.9e-245 851.3 495 90.3
TWI53G0466 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 3.9e-245 851.3 494 89.9
Potri.016G116200 Populus trichocarpa HOM05D003907 ORTHO05D004819 5.1e-245 850.9 494 89.5
Potri.006G100200 Populus trichocarpa HOM05D003907 ORTHO05D004819 8.8e-245 850.1 494 89.3
Prupe.6G277300 Prunus persica HOM05D003907 ORTHO05D004819 1.5e-244 849.4 494 89.3
Duzib106G0096 Durio zibethinus HOM05D003907 ORTHO05D004819 2.0e-244 849.0 495 89.7
MSTRG.26811 Avicennia marina HOM05D003907 ORTHO05D004819 4.4e-244 847.8 494 89.9
Dinv23105 Davidia involucrata HOM05D003907 ORTHO05D004819 4.4e-244 847.8 494 89.5
Glyma.18G200800 Glycine max HOM05D003907 ORTHO05D004819 7.4e-244 847.0 494 89.7
Gohir.D09G160800 Gossypium hirsutum HOM05D003907 ORTHO05D004819 7.4e-244 847.0 495 89.5
Gohir.A09G165200 Gossypium hirsutum HOM05D003907 ORTHO05D004819 9.7e-244 846.7 495 89.3
CiPaw.09G209200 Carya illinoinensis HOM05D003907 ORTHO05D004819 1.3e-243 846.3 494 90.3
TWI74G1106 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 1.7e-243 845.9 494 89.5
Gorai.006G182500 Gossypium raimondii HOM05D003907 ORTHO05D004819 2.2e-243 845.5 495 89.3
Manes.09G104800 Manihot esculenta HOM05D003907 ORTHO05D004819 2.8e-243 845.1 494 88.5
Glyma.07G149900 Glycine max HOM05D003907 ORTHO05D004819 3.7e-243 844.7 494 89.3
MSTRG.10218 Avicennia marina HOM05D003907 ORTHO05D004819 6.3e-243 844.0 494 88.5
THA.LOC104823300 Tarenaya hassleriana HOM05D003907 ORTHO05D004819 1.8e-242 842.4 494 89.1
Thecc.05G016000 Theobroma cacao HOM05D003907 ORTHO05D004819 2.4e-242 842.0 495 89.3
Manes.09G105700 Manihot esculenta HOM05D003907 ORTHO05D004819 3.1e-242 841.6 494 87.9
CANSAT35G0110 Cannabis sativa HOM05D003907 ORTHO05D004819 4.1e-242 841.3 494 89.7
Lj2A75G35 Lonicera japonica HOM05D003907 ORTHO05D004819 9.1e-242 840.1 494 88.5
Sabra16G0111700 Salix brachista HOM05D003907 ORTHO05D004819 1.5e-241 839.3 494 87.9
Sp6g40750 Schrenkiella parvula HOM05D003907 ORTHO05D004819 1.5e-241 839.3 503 86.5
Thhalv10013023m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 2.6e-241 838.6 494 87.7
Psat3g128200 Pisum sativum HOM05D003907 ORTHO05D004819 2.6e-241 838.6 494 87.9
Cc06_g01360 Coffea canephora HOM05D003907 ORTHO05D004819 3.4e-241 838.2 494 88.5
CsaV3_4G026280 Cucumis sativus L. HOM05D003907 ORTHO05D004819 4.5e-241 837.8 503 86.5
Carub.0006s0037 Capsella rubella HOM05D003907 ORTHO05D004819 5.9e-241 837.4 494 87.4
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 5.9e-241 837.4 494 88.3
QL07p019755 Quercus lobata HOM05D003907 ORTHO05D004819 1.0e-240 836.6 494 88.7
Haze_21003 Corylus avellana HOM05D003907 ORTHO05D004819 1.3e-240 836.3 535 83.9
Nn2g11497 Nelumbo nucifera HOM05D003907 ORTHO05D004819 1.3e-240 836.3 494 87.4
Actinidia05367 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.7e-240 835.9 496 88.7
ClCG04G006990 Citrullus lanatus HOM05D003907 ORTHO05D004819 1.7e-240 835.9 494 87.9
MD12G1166000 Malus domestica HOM05D003907 ORTHO05D004819 1.7e-240 835.9 494 88.5
TPR.G13353 Trifolium pratense HOM05D003907 ORTHO05D004819 1.7e-240 835.9 494 88.1
TAR636G2600 Trochodendron aralioides HOM05D003907 ORTHO05D004819 1.7e-240 835.9 503 86.5
Migut.L02013 Erythranthe guttata HOM05D003907 ORTHO05D004819 2.2e-240 835.5 494 87.0
AL3G19930 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 2.9e-240 835.1 494 87.4
AT5G01460 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 2.9e-240 835.1 494 87.2
CARHR211830 Cardamine hirsuta HOM05D003907 ORTHO05D004819 2.9e-240 835.1 494 87.0
Oeu041306.1 Olea europaea HOM05D003907 ORTHO05D004819 2.9e-240 835.1 494 87.9
SGA_v2.0_scaffold110G31215 Striga asiatica HOM05D003907 ORTHO05D004819 2.9e-240 835.1 494 87.7
Atru.chr8.2242 Acer truncatum HOM05D003907 ORTHO05D004819 3.8e-240 834.7 495 87.7
AL6G10610 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 1.4e-239 832.8 494 86.8
AT3G08930 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 2.5e-239 832.0 494 87.0
Sed0026155 Sechium edule HOM05D003907 ORTHO05D004819 2.5e-239 832.0 494 87.2
Thhalv10020541m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 5.5e-239 830.9 494 87.2
CSS0040367 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 7.2e-239 830.5 495 88.1
Carub.0003s0804 Capsella rubella HOM05D003907 ORTHO05D004819 7.2e-239 830.5 494 87.2
CAN.G5.12 Capsicum annuum HOM05D003907 ORTHO05D004819 9.4e-239 830.1 494 87.0
PGR004G0735 Punica granatum HOM05D003907 ORTHO05D004819 9.4e-239 830.1 494 88.7
Sp3g07320 Schrenkiella parvula HOM05D003907 ORTHO05D004819 9.4e-239 830.1 494 87.2
HanXRQChr10g0299881 Helianthus annuus HOM05D003907 ORTHO05D004819 1.2e-238 829.7 494 88.1
Medtr7g068440 Medicago truncatula HOM05D003907 ORTHO05D004819 1.6e-238 829.3 493 87.2
arahy.Tifrunner.gnm1.ann1.NAY5W3 Arachis hypogaea HOM05D003907 ORTHO05D004819 3.6e-238 828.2 494 87.7
arahy.Tifrunner.gnm1.ann1.S2G015 Arachis hypogaea HOM05D003907 ORTHO05D004819 3.6e-238 828.2 494 87.7
TAR633G0126 Trochodendron aralioides HOM05D003907 ORTHO05D004819 3.6e-238 828.2 503 86.1
Lsat_1_v5_gn_9_34621 Lactuca sativa HOM05D003907 ORTHO05D004819 6.1e-238 827.4 494 86.6
MD04G1152700 Malus domestica HOM05D003907 ORTHO05D004819 6.1e-238 827.4 494 87.7
CARHR083260 Cardamine hirsuta HOM05D003907 ORTHO05D004819 1.8e-237 825.9 494 86.6
Nitab4.5_0000511g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 3.0e-237 825.1 494 87.4
Nitab4.5_0000335g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 3.9e-237 824.7 494 87.4
Glyma.03G058100 Glycine max HOM05D003907 ORTHO05D004819 5.2e-237 824.3 494 88.1
Rhsim03G0144200 Rhododendron simsii HOM05D003907 ORTHO05D004819 6.7e-237 823.9 506 86.4
Aa31LG1G23090 Aethionema arabicum HOM05D003907 ORTHO05D004819 1.5e-236 822.8 494 86.0
Glyma.01G122100 Glycine max HOM05D003907 ORTHO05D004819 1.5e-236 822.8 493 88.0
BolC5t34549H Brassica oleracea HOM05D003907 ORTHO05D004819 2.6e-236 822.0 503 85.1
Aqoxy4G02574 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 3.3e-236 821.6 504 84.5
BcaB04g18559 Brassica carinata HOM05D003907 ORTHO05D004819 3.3e-236 821.6 503 84.9
C05p58960 Brassica napus HOM05D003907 ORTHO05D004819 3.3e-236 821.6 503 85.1
Sed0027660 Sechium edule HOM05D003907 ORTHO05D004819 4.4e-236 821.2 494 86.0
A05p39920 Brassica napus HOM05D003907 ORTHO05D004819 5.7e-236 820.8 495 85.7
BraSC256t45932Z Brassica rapa HOM05D003907 ORTHO05D004819 7.4e-236 820.5 503 84.9
Ca_20232_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 7.4e-236 820.5 494 86.4
PGSC0003DMG400023084 Solanum tuberosum HOM05D003907 ORTHO05D004819 1.7e-235 819.3 494 85.6
CSS0038026 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 2.8e-235 818.5 494 86.0
ATR0618G011 Amborella trichopoda HOM05D003907 ORTHO05D004819 3.7e-235 818.1 494 85.8
CiPaw.10G156600 Carya illinoinensis HOM05D003907 ORTHO05D004819 3.7e-235 818.1 494 87.0
Lj3g0019592 Lotus japonicus HOM05D003907 ORTHO05D004819 3.7e-235 818.1 494 86.6
Sopen09g001280 Solanum pennellii HOM05D003907 ORTHO05D004819 3.7e-235 818.1 494 85.6
Solyc09g005310.3 Solanum lycopersicum HOM05D003907 ORTHO05D004819 4.8e-235 817.8 494 85.6
Migut.J00170 Erythranthe guttata HOM05D003907 ORTHO05D004819 5.3e-234 814.3 494 85.8
COL.COLO4_14536 Corchorus olitorius HOM05D003907 ORTHO05D004819 4.5e-233 811.2 472 89.6
vmacro11169 Vaccinium macrocarpon HOM05D003907 ORTHO05D004819 5.9e-233 810.8 533 81.6
RcHm_v2.0_Chr3g0463141 Rosa chinensis HOM05D003907 ORTHO05D004819 1.7e-232 809.3 494 84.8
unitig_8.g3229 Utricularia gibba HOM05D003907 ORTHO05D004819 2.2e-232 808.9 503 83.1
FAN09G4250 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.5e-231 806.2 494 85.0
FAN05G4390 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.9e-231 805.8 498 84.1
Sabra06G0077000 Salix brachista HOM05D003907 ORTHO05D004819 1.9e-231 805.8 557 78.3
VMungo0331G1185 Vigna mungo HOM05D003907 ORTHO05D004819 2.5e-231 805.4 495 85.9
DCAR_018702 Daucus carota HOM05D003907 ORTHO05D004819 3.2e-231 805.1 495 84.2
Aqoxy2G00900 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 5.5e-231 804.3 495 85.1
Hund14296 Selenicereus undatus HOM05D003907 ORTHO05D004819 5.5e-231 804.3 494 84.4
Ah.12g058610 Amaranthus hybridus HOM05D003907 ORTHO05D004819 7.2e-231 803.9 494 84.8
PSO339G6136 Papaver somniferum HOM05D003907 ORTHO05D004819 7.2e-231 803.9 509 83.7
PSO801G0155 Papaver somniferum HOM05D003907 ORTHO05D004819 1.2e-230 803.1 509 83.3
FvH4_6g11450 Fragaria vesca HOM05D003907 ORTHO05D004819 1.6e-230 802.7 494 84.6
FAN14G1433 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.6e-230 802.7 494 84.6
FAN14G5854 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.6e-230 802.7 494 84.6
FAN02G2014 Fragaria x ananassa HOM05D003907 ORTHO05D004819 6.1e-230 800.8 494 84.4
Lalb_Chr01g0023081 Lupinus albus HOM05D003907 ORTHO05D004819 6.1e-230 800.8 496 85.1
Phvul.008G104400 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 1.4e-229 799.7 494 84.2
AUR62010458 Chenopodium quinoa HOM05D003907 ORTHO05D004819 5.2e-229 797.7 494 83.4
SalBow5G2920 Salvia bowleyana HOM05D003907 ORTHO05D004819 5.2e-229 797.7 494 82.8
A03p36270 Brassica napus HOM05D003907 ORTHO05D004819 5.7e-228 794.3 503 82.7
C03p43910 Brassica napus HOM05D003907 ORTHO05D004819 5.7e-228 794.3 503 82.7
BolC3t16659H Brassica oleracea HOM05D003907 ORTHO05D004819 7.5e-228 793.9 503 82.5
BraA03t12798Z Brassica rapa HOM05D003907 ORTHO05D004819 1.7e-227 792.7 503 82.5
Lalb_Chr03g0043281 Lupinus albus HOM05D003907 ORTHO05D004819 1.4e-226 789.6 496 83.7
EL10Ac5g12561 Beta vulgaris HOM05D003907 ORTHO05D004819 2.4e-226 788.9 494 82.4
Lj3A953T53 Lonicera japonica HOM05D003907 ORTHO05D004819 1.2e-225 786.6 517 80.3
ECA247G1720 Erigeron canadensis HOM05D003907 ORTHO05D004819 6.5e-224 780.8 477 84.9
CDE05G1648 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 3.2e-223 778.5 494 81.2
Ca_07641_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 4.7e-222 774.6 524 79.2
Ca_30080_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 4.7e-222 774.6 524 79.2
Zm00001eb269470 Zea mays HOM05D003907 ORTHO05D004819 4.4e-220 768.1 495 81.0
CDE05G1838 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 1.3e-219 766.5 494 80.2
Oeu064499.2 Olea europaea HOM05D003907 ORTHO05D004819 2.0e-217 759.2 531 76.8
Zm00001eb378570 Zea mays HOM05D003907 ORTHO05D004819 9.5e-215 750.4 510 78.0
AUR62030453 Chenopodium quinoa HOM05D003907 ORTHO05D004819 8.0e-214 747.3 495 79.8
BcaC05g29627 Brassica carinata HOM05D003907 ORTHO05D004819 4.0e-213 745.0 440 87.0
Lalb_Chr19g0124541 Lupinus albus HOM05D003907 ORTHO05D004819 2.6e-212 742.3 496 80.2
Peaxi162Scf00141g01026 Petunia axillaris HOM05D003907 ORTHO05D004819 1.3e-208 729.9 494 78.9
Phvul.010G001200 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 1.3e-208 729.9 494 79.1
MELO3C003291.2 Cucumis melo HOM05D003907 ORTHO05D004819 1.2e-201 706.8 472 80.5
Lj3g0026649 Lotus japonicus HOM05D003907 ORTHO05D004819 1.7e-200 703.0 413 88.9
Duzib128G0387 Durio zibethinus HOM05D003907 ORTHO05D004819 1.0e-192 677.2 495 75.6
Duzib093G1828 Durio zibethinus HOM05D003907 ORTHO05D004819 6.6e-192 674.5 495 74.3
SMO367G0485 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.3e-184 650.2 508 68.3
Actinidia20733 Actinidia chinensis HOM05D003907 ORTHO05D004819 6.6e-184 647.9 496 73.0
Mapoly0058s0053 Marchantia polymorpha HOM05D003907 ORTHO05D004819 9.5e-183 644.0 501 64.5
Cpa.g.sc11.141 Carica papaya HOM05D003907 ORTHO05D004819 1.2e-182 643.7 375 88.3
unitig_22.g6592 Utricularia gibba HOM05D003907 ORTHO05D004819 1.9e-170 603.2 461 70.5
Pp3c13_15020 Physcomitrium patens HOM05D003907 ORTHO05D004819 2.1e-169 599.7 501 61.3
HPP92_003698 Vanilla planifolia HOM05D003907 ORTHO05D004819 9.9e-164 580.9 379 79.7
SMO146G0061 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.4e-162 577.0 494 58.9
CBR_g40208 Chara braunii HOM05D003907 ORTHO05D004819 1.9e-162 576.6 512 59.6
CBR_g53729 Chara braunii HOM05D003907 ORTHO05D004819 4.6e-161 572.0 505 59.2
DCAR_015417 Daucus carota HOM05D003907 ORTHO05D004819 1.3e-158 563.9 504 63.3
Sc01g0006450 Simmondsia chinensis HOM05D003907 ORTHO05D004819 1.4e-157 560.5 349 85.1
TPR.G7076 Trifolium pratense HOM05D003907 ORTHO05D004819 1.4e-157 560.5 348 84.8
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 3.9e-152 542.3 347 82.4
Hma1.2p1_0362F.1_g136250 Hydrangea macrophylla HOM05D003907 ORTHO05D004819 8.2e-150 534.6 310 91.6
Pp3c23_4110 Physcomitrium patens HOM05D003907 ORTHO05D004819 5.3e-149 531.9 500 53.0
Actinidia11586 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.5e-143 513.8 441 68.3
Glyma.16G099300 Glycine max HOM05D003907 ORTHO05D004819 4.1e-141 505.8 291 92.1
Actinidia27153 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.2e-132 477.6 268 94.4
AagrBONN_evm.TU.Sc2ySwM_368.1024 Anthoceros agrestis HOM05D003907 ORTHO05D004819 7.2e-130 468.4 383 60.8
PRCOL_00002088 Prasinoderma coloniale HOM05D003907 ORTHO05D004819 6.7e-120 435.3 513 48.1
Actinidia29101 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.4e-117 427.6 254 86.6
MCO03G500 Micromonas commoda HOM05D003907 ORTHO05D004819 1.6e-105 387.5 489 44.2
Actinidia29102 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.8e-104 384.0 229 89.5
SMO015G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 4.0e-104 382.9 386 53.9
SEGI_00285 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 3.1e-101 373.2 267 74.2
Cre01.g023400 Chlamydomonas reinhardtii HOM05D003907 ORTHO05D004819 4.1e-93 346.3 507 38.7
CSS0040994 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 6.0e-76 289.3 199 79.4
SMO173G0027 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 4.9e-70 269.6 343 46.1
SEGI_07345 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 3.2e-61 240.4 142 88.7
TPR.G8133 Trifolium pratense HOM05D003907 ORTHO05D038338 5.4e-61 239.6 494 37.7
SMO173G0021 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 8.7e-59 232.3 289 46.0
SMO023G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D376622 8.1e-57 225.7 365 41.4
ATR0759G042 Amborella trichopoda HOM05D003907 ORTHO05D038338 2.1e-49 201.1 117 83.8
ATR0759G047 Amborella trichopoda HOM05D003907 ORTHO05D004819 8.4e-46 189.1 164 67.7
SMO146G0194 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.4e-45 188.3 206 52.4
SMO173G0002 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 5.1e-43 179.9 197 51.3
Ca_20230_v3 Cicer arietinum L. HOM05D003907 ORTHO05D148210 1.0e-35 155.6 106 77.4
SMO146G0334 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 4.5e-31 140.2 119 58.0
BcaC01g04205 Brassica carinata HOM05D003907 ORTHO05D004819 4.9e-30 136.7 87 83.9
VMungo1080G1595 Vigna mungo HOM05D003907 ORTHO05D004819 1.3e-22 112.1 156 47.4
SMO173G0093 Selaginella moellendorffii HOM05D003907 ORTHO05D378519 1.1e-10 72.4 63 57.1
arahy.Tifrunner.gnm1.ann1.7H636Z Arachis hypogaea HOM05D005380 ORTHO05D006601 3.1e-08 64.3 37 83.8
arahy.Tifrunner.gnm1.ann1.W1QHU6 Arachis hypogaea HOM05D003907 ORTHO05D018508 2.6e-07 61.2 96 47.9
PSO541G6111 Papaver somniferum HOM05D003907 ORTHO05D305003 1.7e-06 58.5 38 76.3


User provided reference genes

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