Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B02785 Eucalyptus grandis HOM05D007125 ORTHO05D008766 1.2e-189 666.4 339 100.0
Eucgr.B02786 Eucalyptus grandis HOM05D001641 ORTHO05D001667 4.7e-53 212.6 116 96.6
PGR031G2086 Punica granatum HOM05D007125 ORTHO05D008766 2.3e-36 157.1 342 35.4
Manes.08G087700 Manihot esculenta HOM05D007125 ORTHO05D008766 5.2e-28 129.4 351 30.8
Haze_20950 Corylus avellana HOM05D007125 ORTHO05D008766 1.1e-25 121.7 339 31.0
Potri.006G096400 Populus trichocarpa HOM05D007125 ORTHO05D008766 1.7e-23 114.4 355 29.6
Atru.chr8.2198 Acer truncatum HOM05D007125 ORTHO05D008766 3.8e-23 113.2 338 31.4
TAR623G0133 Trochodendron aralioides HOM05D007125 ORTHO05D008766 3.8e-23 113.2 352 30.7
Dinv35513 Davidia involucrata HOM05D007125 ORTHO05D008766 5.0e-23 112.8 347 30.0
CiPaw.09G206100 Carya illinoinensis HOM05D007125 ORTHO05D008766 1.5e-22 111.3 344 31.7
Sabra06G0074100 Salix brachista HOM05D007125 ORTHO05D008766 6.1e-21 105.9 355 29.3
TWI77G0961 Tripterygium wilfordii HOM05D007125 ORTHO05D008766 5.2e-20 102.8 349 28.9
Duzib093G0828 Durio zibethinus HOM05D007125 ORTHO05D008766 3.4e-19 100.1 340 28.2
ClCG04G007250 Citrullus lanatus HOM05D007125 ORTHO05D008766 3.7e-18 96.7 337 27.9
MBI05_g03454_MAGBIO Magnolia biondii HOM05D007125 ORTHO05D008766 4.1e-17 93.2 241 30.7
Lj1g0008640 Lotus japonicus HOM05D007125 ORTHO05D008766 1.3e-15 88.2 353 26.3
CSS0003995 Camellia sinensis var. sinensis HOM05D007125 ORTHO05D008766 3.9e-15 86.7 361 27.7
Thecc.05G022200 Theobroma cacao HOM05D007125 ORTHO05D008766 6.6e-15 85.9 201 33.3
CsaV3_4G025990 Cucumis sativus L. HOM05D007125 ORTHO05D008766 1.1e-14 85.1 339 27.1
Gohir.A09G163400 Gossypium hirsutum HOM05D007125 ORTHO05D008766 1.1e-14 85.1 324 26.2
Actinidia29131 Actinidia chinensis HOM05D007125 ORTHO05D008766 3.3e-14 83.6 348 27.9
Lalb_Chr03g0042991 Lupinus albus HOM05D007125 ORTHO05D008766 4.3e-14 83.2 347 27.7
COL.COLO4_14596 Corchorus olitorius HOM05D007125 ORTHO05D008766 1.2e-13 81.6 327 28.7
Glyma.07G144800 Glycine max HOM05D007125 ORTHO05D008766 1.6e-13 81.3 333 27.3
Medtr7g066750 Medicago truncatula HOM05D007125 ORTHO05D008766 2.1e-13 80.9 336 28.9
Gohir.D09G158900 Gossypium hirsutum HOM05D007125 ORTHO05D008766 4.7e-13 79.7 195 33.8
VMungo1383G2599 Vigna mungo HOM05D007125 ORTHO05D008766 4.7e-13 79.7 331 29.3
Phvul.008G107900 Phaseolus vulgaris HOM05D007125 ORTHO05D008766 6.1e-13 79.3 331 29.3
arahy.Tifrunner.gnm1.ann1.A1GI61 Arachis hypogaea HOM05D007125 ORTHO05D008766 8.0e-13 79.0 348 28.2
MELO3C003224.2 Cucumis melo HOM05D007125 ORTHO05D008766 8.0e-13 79.0 344 27.6
arahy.Tifrunner.gnm1.ann1.8EY2MC Arachis hypogaea HOM05D007125 ORTHO05D008766 1.0e-12 78.6 348 27.9
Ca_09172_v3 Cicer arietinum L. HOM05D007125 ORTHO05D008766 1.0e-12 78.6 348 27.6
Gorai.006G180600 Gossypium raimondii HOM05D007125 ORTHO05D008766 1.0e-12 78.6 324 29.0
TPR.G40809 Trifolium pratense HOM05D007125 ORTHO05D008766 1.8e-12 77.8 342 25.1
CANSAT35G1716 Cannabis sativa HOM05D007125 ORTHO05D008766 5.2e-12 76.3 338 29.6
PSO384G0252 Papaver somniferum HOM05D007125 ORTHO05D008766 2.2e-10 70.9 339 25.1
DCAR_024035 Daucus carota HOM05D007125 ORTHO05D008766 3.7e-10 70.1 370 25.9
Aqoxy1G00714 Aquilegia oxysepala HOM05D007125 ORTHO05D008766 3.2e-09 67.0 356 25.0
Hma1.2p1_0763F.1_g214650 Hydrangea macrophylla HOM05D007125 ORTHO05D008766 9.2e-09 65.5 196 30.6
Sc01g0006790 Simmondsia chinensis HOM05D007125 ORTHO05D008766 2.7e-08 63.9 334 26.0
Sed0001650 Sechium edule HOM05D007125 ORTHO05D008766 1.7e-07 61.2 203 31.5
Psat3g131480 Pisum sativum HOM05D007125 ORTHO05D008766 3.9e-07 60.1 345 23.8
THA.LOC104823281 Tarenaya hassleriana HOM05D007125 ORTHO05D008766 5.6e-06 56.2 200 26.5
Lj2A79T37 Lonicera japonica HOM05D007125 ORTHO05D008766 7.3e-06 55.8 338 24.9


User provided reference genes

Program Settings