Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 7.3e-164 580.5 290 100.0
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 8.2e-99 364.4 274 69.0
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 1.2e-97 360.5 288 65.6
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 1.5e-97 360.1 278 68.3
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 2.6e-97 359.4 290 66.2
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.0e-96 357.5 289 67.1
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 2.9e-96 355.9 289 66.8
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 2.5e-95 352.8 275 68.0
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 3.2e-95 352.4 280 67.1
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 9.4e-95 350.9 288 66.7
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 2.7e-94 349.4 275 66.2
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 3.6e-94 349.0 289 66.8
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 6.1e-94 348.2 244 72.5
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 1.8e-93 346.7 237 73.0
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 1.8e-93 346.7 273 65.6
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 3.0e-93 345.9 284 64.4
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 1.5e-92 343.6 300 63.3
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 3.3e-92 342.4 286 65.0
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 4.4e-92 342.0 297 64.6
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 4.4e-92 342.0 275 66.9
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 5.7e-92 341.7 245 71.0
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 1.7e-91 340.1 241 72.6
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 2.8e-91 339.3 255 69.8
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 4.8e-91 338.6 312 61.5
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 4.8e-91 338.6 297 64.0
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 6.3e-91 338.2 240 71.7
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 8.2e-91 337.8 287 64.5
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 8.2e-91 337.8 278 65.5
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 1.8e-90 336.7 295 62.4
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 3.1e-90 335.9 243 70.8
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 4.1e-90 335.5 260 68.1
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 5.3e-90 335.1 268 65.7
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 5.3e-90 335.1 287 64.5
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 1.2e-89 334.0 293 60.4
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 2.0e-89 333.2 272 64.7
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 3.4e-89 332.4 291 60.5
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 5.9e-89 331.6 300 60.7
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 1.7e-88 330.1 291 62.2
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 1.7e-88 330.1 288 63.2
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 2.2e-88 329.7 262 66.8
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 2.9e-88 329.3 263 65.4
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 5.0e-88 328.6 245 68.6
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 6.5e-88 328.2 242 68.2
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 1.1e-87 327.4 253 67.6
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 1.1e-87 327.4 253 67.6
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 1.4e-87 327.0 227 72.2
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 3.2e-87 325.9 241 68.9
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 4.2e-87 325.5 254 67.7
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 9.4e-87 324.3 299 60.5
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 1.2e-86 323.9 263 64.6
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 1.2e-86 323.9 271 64.2
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 3.6e-86 322.4 273 61.2
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 3.6e-86 322.4 293 58.4
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 6.1e-86 321.6 280 62.1
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 7.9e-86 321.2 236 67.8
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 7.9e-86 321.2 289 63.0
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 1.4e-85 320.5 246 66.7
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 2.3e-85 319.7 247 66.0
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 8.8e-85 317.8 301 59.1
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 1.5e-84 317.0 251 66.1
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 2.6e-84 316.2 233 69.1
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 3.3e-84 315.8 237 69.2
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 7.4e-84 314.7 248 66.5
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 1.3e-83 313.9 270 61.5
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 1.7e-83 313.5 252 63.1
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 4.1e-82 308.9 233 66.1
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 4.1e-82 308.9 320 57.2
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 3.5e-81 305.8 339 52.8
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 4.5e-81 305.4 243 64.6
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 7.7e-81 304.7 287 58.5
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 1.3e-80 303.9 304 55.6
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 2.2e-80 303.1 264 61.7
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 5.0e-80 302.0 288 58.3
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 6.5e-80 301.6 305 57.0
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.1e-79 300.8 281 59.1
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 1.5e-79 300.4 264 61.4
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 2.5e-79 299.7 243 63.8
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 5.5e-79 298.5 281 59.4
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 7.2e-79 298.1 239 64.9
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 9.4e-79 297.7 279 58.8
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 6.1e-78 295.0 242 61.6
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 8.0e-78 294.7 242 61.2
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 1.0e-77 294.3 258 60.1
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 2.3e-77 293.1 232 61.2
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 4.0e-77 292.4 282 55.7
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 5.2e-77 292.0 266 58.3
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 8.8e-77 291.2 218 65.1
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 1.5e-76 290.4 302 53.3
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.6e-76 289.7 271 58.7
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 4.4e-76 288.9 235 63.4
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 1.3e-75 287.3 287 55.7
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 1.1e-74 284.3 258 59.3
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 1.2e-73 280.8 196 69.9
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 1.2e-73 280.8 206 72.8
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 2.0e-73 280.0 274 57.7
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 2.7e-73 279.6 238 62.2
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 1.7e-72 276.9 226 62.8
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 2.9e-72 276.2 307 53.4
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 7.2e-71 271.6 271 56.5
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 4.4e-68 262.3 260 57.7
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 5.4e-66 255.4 215 60.0
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 1.0e-64 251.1 197 67.0
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 5.5e-63 245.4 329 45.6
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 9.5e-63 244.6 148 79.7
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 1.8e-61 240.4 183 66.7
SEGI_07841 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 2.4e-58 229.9 207 54.6
Medtr5g035040 Medicago truncatula HOM05D006231 ORTHO05D007857 7.0e-58 228.4 224 54.9
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 2.7e-57 226.5 271 49.8
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 2.8e-54 216.5 143 74.1
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 7.0e-50 201.8 170 64.1
SEGI_36756 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 2.3e-48 196.8 207 48.8
Zm00001eb424460 Zea mays HOM05D006231 ORTHO05D007857 3.9e-48 196.1 278 44.6
Os04g0465500 Oryza sativa ssp. japonica HOM05D006231 ORTHO05D007857 4.3e-47 192.6 294 42.9
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 9.8e-44 181.4 167 55.7
Zm00001eb348680 Zea mays HOM05D006231 ORTHO05D007857 9.2e-42 174.9 268 42.5
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 6.6e-40 168.7 219 45.2
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 6.6e-40 168.7 219 45.2
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 5.2e-37 159.1 227 42.7
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 1.3e-32 144.4 195 42.1
Medtr5g035050 Medicago truncatula HOM05D006231 ORTHO05D007857 4.0e-29 132.9 85 77.6
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 2.9e-27 126.7 90 71.1
AagrBONN_evm.TU.Sc2ySwM_368.2752 Anthoceros agrestis HOM05D006231 ORTHO05D007857 1.4e-26 124.4 179 44.1
CBR_g40430 Chara braunii HOM05D017800 ORTHO05D019665 1.5e-23 114.4 283 34.3
TAR622G0489 Trochodendron aralioides HOM05D006231 ORTHO05D007857 2.1e-14 84.0 74 60.8
PRCOL_00005055 Prasinoderma coloniale HOM05D006231 ORTHO05D007857 4.2e-10 69.7 119 33.6
Cre10.g464750 Chlamydomonas reinhardtii HOM05D006231 ORTHO05D007857 2.8e-06 57.0 246 21.5


User provided reference genes

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