Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B02497 Eucalyptus grandis HOM05D006634 ORTHO05D008282 2.5e-55 218.8 128 100.0
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 1.8e-26 122.9 86 72.1
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 8.5e-24 114.0 86 65.1
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 1.9e-23 112.8 86 69.8
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 3.2e-23 112.1 86 65.1
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 7.2e-23 110.9 86 64.0
Gohir.A05G103000 Gossypium hirsutum HOM05D006634 ORTHO05D008282 2.7e-22 109.0 88 64.8
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 4.7e-22 108.2 86 62.8
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 4.7e-22 108.2 86 62.8
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 4.7e-22 108.2 86 62.8
Gorai.009G107000 Gossypium raimondii HOM05D006634 ORTHO05D008282 6.1e-22 107.8 87 66.7
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 1.0e-21 107.1 86 59.3
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 3.0e-21 105.5 98 57.1
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 3.0e-21 105.5 98 57.1
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 3.0e-21 105.5 98 57.1
CDE06G1545 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 3.0e-21 105.5 86 66.3
RcHm_v2.0_Chr5g0059081 Rosa chinensis HOM05D006634 ORTHO05D008282 4.0e-21 105.1 86 61.6
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 4.0e-21 105.1 86 61.6
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 4.0e-21 105.1 86 61.6
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 5.2e-21 104.8 87 62.1
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 5.2e-21 104.8 87 62.1
Thecc.09G340600 Theobroma cacao HOM05D006634 ORTHO05D008282 5.2e-21 104.8 80 67.5
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 6.7e-21 104.4 86 62.8
Ciclev10029701m.g Citrus clementina HOM05D006634 ORTHO05D008282 6.7e-21 104.4 86 62.8
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 6.7e-21 104.4 90 61.1
Gohir.D05G102700 Gossypium hirsutum HOM05D006634 ORTHO05D008282 8.8e-21 104.0 105 58.1
AT2G28430 Arabidopsis thaliana HOM05D006634 ORTHO05D008282 1.1e-20 103.6 86 61.6
Duzib168G0710 Durio zibethinus HOM05D006634 ORTHO05D008282 1.1e-20 103.6 86 64.0
CARHR121380 Cardamine hirsuta HOM05D006634 ORTHO05D008282 1.5e-20 103.2 86 60.5
Duzib150G1350 Durio zibethinus HOM05D006634 ORTHO05D008282 1.5e-20 103.2 86 65.1
Sp4g11250 Schrenkiella parvula HOM05D006634 ORTHO05D008282 2.0e-20 102.8 86 60.5
AL4G21590 Arabidopsis lyrata HOM05D006634 ORTHO05D008282 3.3e-20 102.1 86 60.5
Lalb_Chr19g0137281 Lupinus albus HOM05D006634 ORTHO05D008282 4.4e-20 101.7 86 62.8
Prupe.6G101400 Prunus persica HOM05D006634 ORTHO05D008282 5.7e-20 101.3 86 61.6
Cpa.g.sc216.10 Carica papaya HOM05D006634 ORTHO05D008282 9.7e-20 100.5 75 66.7
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 9.7e-20 100.5 86 61.6
Glyma.12G067600 Glycine max HOM05D006634 ORTHO05D008282 9.7e-20 100.5 85 61.2
Manes.11G145100 Manihot esculenta HOM05D006634 ORTHO05D008282 9.7e-20 100.5 83 61.4
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 9.7e-20 100.5 86 55.8
Carub.0004s0938 Capsella rubella HOM05D006634 ORTHO05D008282 1.3e-19 100.1 86 59.3
Atru.chr3.3630 Acer truncatum HOM05D006634 ORTHO05D008282 1.7e-19 99.8 86 58.1
BcaNung07072 Brassica carinata HOM05D006634 ORTHO05D008282 1.7e-19 99.8 86 57.0
BolC4t23789H Brassica oleracea HOM05D006634 ORTHO05D008282 1.7e-19 99.8 86 58.1
THA.LOC104826362 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 1.7e-19 99.8 85 62.4
BraA07t29605Z Brassica rapa HOM05D006634 ORTHO05D008282 2.2e-19 99.4 86 58.1
CANSAT54G1506 Cannabis sativa HOM05D006634 ORTHO05D008282 2.2e-19 99.4 87 59.8
Lj3g0007397 Lotus japonicus HOM05D006634 ORTHO05D008282 2.2e-19 99.4 86 62.8
A07p19000 Brassica napus HOM05D006634 ORTHO05D008282 2.8e-19 99.0 86 58.1
SalBow3G1265 Salvia bowleyana HOM05D006634 ORTHO05D008282 3.7e-19 98.6 86 59.3
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 4.8e-19 98.2 86 60.5
CDE07G0066 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 6.3e-19 97.8 83 63.9
Thhalv10017488m.g Eutrema salsugineum HOM05D006634 ORTHO05D008282 8.2e-19 97.4 87 59.8
FAN21G3892 Fragaria x ananassa HOM05D006634 ORTHO05D008282 8.2e-19 97.4 86 57.0
TPR.G15540 Trifolium pratense HOM05D006634 ORTHO05D008282 1.1e-18 97.1 86 60.5
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 1.4e-18 96.7 86 57.0
MD11G1136000 Malus domestica HOM05D006634 ORTHO05D008282 1.8e-18 96.3 86 60.5
Medtr4g459450 Medicago truncatula HOM05D006634 ORTHO05D008282 2.4e-18 95.9 86 60.5
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 2.4e-18 95.9 86 57.0
arahy.Tifrunner.gnm1.ann1.RYN47D Arachis hypogaea HOM05D006634 ORTHO05D008282 3.1e-18 95.5 86 59.3
Manes.04G021400 Manihot esculenta HOM05D006634 ORTHO05D008282 3.1e-18 95.5 83 60.2
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 4.1e-18 95.1 84 59.5
BcaB06g28214 Brassica carinata HOM05D006634 ORTHO05D008282 4.1e-18 95.1 86 58.1
C04p22950 Brassica napus HOM05D006634 ORTHO05D008282 4.1e-18 95.1 87 57.5
DCAR_018812 Daucus carota HOM05D006634 ORTHO05D008282 4.1e-18 95.1 80 58.8
Sabra04G0142400 Salix brachista HOM05D006634 ORTHO05D008282 4.1e-18 95.1 83 62.7
Gohir.D08G215200 Gossypium hirsutum HOM05D006634 ORTHO05D008282 5.3e-18 94.7 86 61.6
MD03G1117700 Malus domestica HOM05D006634 ORTHO05D008282 7.0e-18 94.4 86 58.1
Psat7g225160 Pisum sativum HOM05D006634 ORTHO05D008282 7.0e-18 94.4 86 59.3
Peaxi162Scf00270g00818 Petunia axillaris HOM05D006634 ORTHO05D008282 9.1e-18 94.0 87 57.5
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 9.1e-18 94.0 86 60.5
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 1.6e-17 93.2 86 55.8
unitig_21.g20301 Utricularia gibba HOM05D006634 ORTHO05D008282 2.0e-17 92.8 87 56.3
FvH4_3g32290 Fragaria vesca HOM05D006634 ORTHO05D008282 2.6e-17 92.4 86 54.7
FAN11G2087 Fragaria x ananassa HOM05D006634 ORTHO05D008282 2.6e-17 92.4 86 54.7
arahy.Tifrunner.gnm1.ann1.8AEA4E Arachis hypogaea HOM05D006634 ORTHO05D008282 3.5e-17 92.0 91 54.9
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 3.5e-17 92.0 87 57.5
Gohir.A08G197800 Gossypium hirsutum HOM05D006634 ORTHO05D008282 3.5e-17 92.0 86 60.5
Gorai.004G228800 Gossypium raimondii HOM05D006634 ORTHO05D008282 3.5e-17 92.0 86 60.5
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 3.5e-17 92.0 86 57.0
Aqoxy2G01632 Aquilegia oxysepala HOM05D006634 ORTHO05D008282 5.9e-17 91.3 85 57.6
Oeu002870.2 Olea europaea HOM05D006634 ORTHO05D008282 5.9e-17 91.3 88 55.7
Potri.004G210800 Populus trichocarpa HOM05D006634 ORTHO05D008282 5.9e-17 91.3 82 59.8
BolC4t27285H Brassica oleracea HOM05D006634 ORTHO05D008282 1.3e-16 90.1 82 53.7
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 2.2e-16 89.4 86 58.1
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 3.8e-16 88.6 88 53.4
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 3.8e-16 88.6 89 52.8
FAN25G2760 Fragaria x ananassa HOM05D006634 ORTHO05D008282 3.8e-16 88.6 85 50.6
BraA04t17721Z Brassica rapa HOM05D006634 ORTHO05D008282 5.0e-16 88.2 82 52.4
AUR62024980 Chenopodium quinoa HOM05D006634 ORTHO05D008282 5.0e-16 88.2 87 56.3
Lsat_1_v5_gn_2_98520 Lactuca sativa HOM05D006634 ORTHO05D008282 8.5e-16 87.4 98 52.0
FAN16G1798 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.5e-15 86.7 79 54.4
Zm00001eb221580 Zea mays HOM05D006634 ORTHO05D008282 5.5e-15 84.7 89 53.9
Actinidia25419 Actinidia chinensis HOM05D006634 ORTHO05D008282 4.7e-14 81.6 74 55.4
Os10g0481400 Oryza sativa ssp. japonica HOM05D006634 ORTHO05D008282 6.1e-14 81.3 90 52.2
ECA238G2380 Erigeron canadensis HOM05D006634 ORTHO05D008282 8.0e-14 80.9 86 50.0
Zm00001eb045570 Zea mays HOM05D006634 ORTHO05D008282 8.0e-14 80.9 87 54.0
HanXRQChr02g0031651 Helianthus annuus HOM05D006634 ORTHO05D008282 1.2e-12 77.0 86 52.3
Lalb_Chr03g0027351 Lupinus albus HOM05D006634 ORTHO05D008282 1.2e-12 77.0 81 54.3
HanXRQChr14g0452861 Helianthus annuus HOM05D006634 ORTHO05D008282 1.7e-11 73.2 83 48.2
Cc01_g11130 Coffea canephora HOM05D006634 ORTHO05D008282 3.1e-10 68.9 66 48.5
QL01p022236 Quercus lobata HOM05D006634 ORTHO05D008282 3.1e-10 68.9 174 32.8
Pp3c7_7440 Physcomitrium patens HOM05D006634 ORTHO05D008282 7.0e-10 67.8 91 40.7
Sed0015282 Sechium edule HOM05D006634 ORTHO05D008282 1.6e-09 66.6 86 43.0
ECA248G3376 Erigeron canadensis HOM05D006634 ORTHO05D008282 2.0e-09 66.2 86 40.7
SalBow3G3864 Salvia bowleyana HOM05D006634 ORTHO05D008282 4.5e-09 65.1 89 49.4
Mapoly0137s0028 Marchantia polymorpha HOM05D006634 ORTHO05D008282 4.2e-07 58.5 92 39.1
A04p21560 Brassica napus HOM05D006634 ORTHO05D008282 4.7e-06 55.1 42 57.1
PGSC0003DMG400008051 Solanum tuberosum HOM05D006634 ORTHO05D008282 8.0e-06 54.3 47 59.6


User provided reference genes

Program Settings