Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B02426 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.8e-61 238.4 121 100.0
Eucgr.G00617 Eucalyptus grandis HOM05D005825 ORTHO05D006483 8.5e-58 226.9 121 94.2
Eucgr.C01173 Eucalyptus grandis HOM05D005825 ORTHO05D006483 4.4e-54 214.5 121 89.3
Eucgr.C03225 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.8e-53 211.8 115 92.2
Atru.chr7.1162 Acer truncatum HOM05D005825 ORTHO05D006483 3.8e-50 201.4 119 84.0
GSVIVG01015529001 Vitis vinifera HOM05D005825 ORTHO05D006483 5.0e-50 201.1 121 82.6
vmacro20556 Vaccinium macrocarpon HOM05D005825 ORTHO05D006483 3.2e-49 198.4 121 80.2
Hma1.2p1_0018F.1_g012420 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 4.2e-49 198.0 121 83.5
Peaxi162Scf00157g01524 Petunia axillaris HOM05D005825 ORTHO05D006483 4.2e-49 198.0 121 81.0
Nn2g12789 Nelumbo nucifera HOM05D005825 ORTHO05D006483 5.5e-49 197.6 119 82.4
Thecc.09G126400 Theobroma cacao HOM05D005825 ORTHO05D006483 5.5e-49 197.6 119 81.5
Hma1.2p1_2368F.1_g320700 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 9.4e-49 196.8 121 82.6
CANSAT11G1244 Cannabis sativa HOM05D005825 ORTHO05D006483 1.6e-48 196.1 121 81.0
Oeu007499.1 Olea europaea HOM05D005825 ORTHO05D006483 2.1e-48 195.7 121 81.8
Actinidia40470 Actinidia chinensis HOM05D005825 ORTHO05D006483 2.7e-48 195.3 118 81.4
Dinv36528 Davidia involucrata HOM05D005825 ORTHO05D006483 2.7e-48 195.3 121 80.2
Gohir.A06G056101 Gossypium hirsutum HOM05D005825 ORTHO05D006483 2.7e-48 195.3 119 81.5
Solyc12g009430.2 Solanum lycopersicum HOM05D005825 ORTHO05D006483 2.7e-48 195.3 121 80.2
Sopen12g004430 Solanum pennellii HOM05D005825 ORTHO05D006483 2.7e-48 195.3 121 80.2
DCAR_009187 Daucus carota HOM05D005825 ORTHO05D006483 3.6e-48 194.9 118 81.4
Ciclev10008932m.g Citrus clementina HOM05D005825 ORTHO05D006483 4.7e-48 194.5 119 79.8
TWI34G0282 Tripterygium wilfordii HOM05D005825 ORTHO05D006483 4.7e-48 194.5 119 79.0
Gorai.010G064100 Gossypium raimondii HOM05D005825 ORTHO05D006483 8.0e-48 193.7 119 80.7
TAR625G0074 Trochodendron aralioides HOM05D005825 ORTHO05D006483 8.0e-48 193.7 119 80.7
Actinidia21988 Actinidia chinensis HOM05D005825 ORTHO05D006483 1.0e-47 193.4 118 81.4
QL10p023454 Quercus lobata HOM05D005825 ORTHO05D006483 1.0e-47 193.4 119 79.8
THA.LOC104815280 Tarenaya hassleriana HOM05D005825 ORTHO05D006483 1.0e-47 193.4 119 79.8
Lj2C942T8 Lonicera japonica HOM05D005825 ORTHO05D006483 1.4e-47 193.0 121 78.5
Manes.06G058801 Manihot esculenta HOM05D005825 ORTHO05D006483 1.4e-47 193.0 119 79.0
PGR142G1018 Punica granatum HOM05D005825 ORTHO05D006483 1.4e-47 193.0 119 79.8
Gohir.D06G054601 Gossypium hirsutum HOM05D005825 ORTHO05D006483 1.8e-47 192.6 119 79.8
Sc08g0006620 Simmondsia chinensis HOM05D005825 ORTHO05D006483 1.8e-47 192.6 121 80.2
Aqoxy5G01398 Aquilegia oxysepala HOM05D005825 ORTHO05D006483 3.0e-47 191.8 118 81.4
Lj2A929T15 Lonicera japonica HOM05D005825 ORTHO05D006483 4.0e-47 191.4 121 77.7
MBI16_g24711_MAGBIO Magnolia biondii HOM05D005825 ORTHO05D006483 4.0e-47 191.4 119 78.2
CiPaw.03G244100 Carya illinoinensis HOM05D005825 ORTHO05D006483 5.2e-47 191.0 121 78.5
Rhsim01G0070600 Rhododendron simsii HOM05D005825 ORTHO05D006483 5.2e-47 191.0 121 76.9
Rhsim01G0071200 Rhododendron simsii HOM05D005825 ORTHO05D006483 8.8e-47 190.3 119 77.3
CAN.G1591.11 Capsicum annuum HOM05D005825 ORTHO05D006483 1.2e-46 189.9 121 77.7
Sabra02G0094300 Salix brachista HOM05D005825 ORTHO05D006483 1.2e-46 189.9 118 78.8
FvH4_1g03280 Fragaria vesca HOM05D005825 ORTHO05D006483 1.5e-46 189.5 121 77.7
FAN19G0135 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.5e-46 189.5 121 77.7
FAN28G2006 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.5e-46 189.5 121 77.7
Potri.014G017900 Populus trichocarpa HOM05D005825 ORTHO05D006483 1.5e-46 189.5 119 78.2
Cpa.g.sc75.29 Carica papaya HOM05D005825 ORTHO05D006483 2.0e-46 189.1 119 79.0
Cc06_g08520 Coffea canephora HOM05D005825 ORTHO05D006483 2.0e-46 189.1 121 76.9
Sabra14G0011800 Salix brachista HOM05D005825 ORTHO05D006483 2.0e-46 189.1 118 78.8
FAN26G2420 Fragaria x ananassa HOM05D005825 ORTHO05D006483 2.6e-46 188.7 121 76.9
Lalb_Chr12g0197941 Lupinus albus HOM05D005825 ORTHO05D006483 2.6e-46 188.7 121 76.9
PSO675G5818 Papaver somniferum HOM05D005825 ORTHO05D006483 2.6e-46 188.7 121 76.9
Potri.002G119800 Populus trichocarpa HOM05D005825 ORTHO05D006483 3.4e-46 188.3 118 78.8
Sed0008025 Sechium edule HOM05D005825 ORTHO05D006483 3.4e-46 188.3 121 76.9
RcHm_v2.0_Chr2g0088431 Rosa chinensis HOM05D005825 ORTHO05D006483 4.4e-46 188.0 121 76.9
Lj4g0013357 Lotus japonicus HOM05D005825 ORTHO05D006483 5.7e-46 187.6 121 77.7
FAN23G1198 Fragaria x ananassa HOM05D005825 ORTHO05D006483 7.5e-46 187.2 121 76.9
Lsat_1_v5_gn_8_58680 Lactuca sativa HOM05D005825 ORTHO05D006483 7.5e-46 187.2 118 78.0
arahy.Tifrunner.gnm1.ann1.1NB5KJ Arachis hypogaea HOM05D005825 ORTHO05D006483 9.8e-46 186.8 118 76.3
CiPaw.04G171000 Carya illinoinensis HOM05D005825 ORTHO05D006483 9.8e-46 186.8 121 75.2
MELO3C004508.2 Cucumis melo HOM05D005825 ORTHO05D006483 9.8e-46 186.8 121 76.0
ECA246G2031 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.8e-46 186.8 118 78.8
CSS0017066 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 1.3e-45 186.4 121 76.9
CSS0027185 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 1.3e-45 186.4 121 76.9
AL4G19680 Arabidopsis lyrata HOM05D005825 ORTHO05D006483 1.7e-45 186.0 118 77.1
Cfa003372 Carpinus fangiana HOM05D005825 ORTHO05D006483 1.7e-45 186.0 121 77.7
DCAR_017816 Daucus carota HOM05D005825 ORTHO05D006483 1.7e-45 186.0 118 78.0
Duzib168G1077 Durio zibethinus HOM05D005825 ORTHO05D006483 1.7e-45 186.0 119 78.2
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 2.2e-45 185.7 119 77.3
arahy.Tifrunner.gnm1.ann1.85XGXJ Arachis hypogaea HOM05D005825 ORTHO05D006483 2.2e-45 185.7 118 76.3
ClCG11G003030 Citrullus lanatus HOM05D005825 ORTHO05D006483 2.2e-45 185.7 118 78.0
PSO782G3266 Papaver somniferum HOM05D005825 ORTHO05D006483 2.2e-45 185.7 121 75.2
CsaV3_2G002850 Cucumis sativus L. HOM05D005825 ORTHO05D006483 2.8e-45 185.3 121 76.0
HanXRQChr17g0537711 Helianthus annuus HOM05D005825 ORTHO05D006483 2.8e-45 185.3 118 78.0
MSTRG.19597 Avicennia marina HOM05D005825 ORTHO05D006483 3.7e-45 184.9 121 76.0
Ca_21683_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 3.7e-45 184.9 121 76.0
Phvul.003G164300 Phaseolus vulgaris HOM05D005825 ORTHO05D006483 3.7e-45 184.9 121 76.0
TPR.G10697 Trifolium pratense HOM05D005825 ORTHO05D006483 3.7e-45 184.9 121 76.0
Eucgr.E01840 Eucalyptus grandis HOM05D005825 ORTHO05D006483 4.8e-45 184.5 121 81.0
HPP92_017605 Vanilla planifolia HOM05D005825 ORTHO05D006483 4.8e-45 184.5 119 74.8
Medtr4g114160 Medicago truncatula HOM05D005825 ORTHO05D006483 6.3e-45 184.1 121 76.0
Ah.09g226210 Amaranthus hybridus HOM05D005825 ORTHO05D006483 1.1e-44 183.3 118 75.4
arahy.Tifrunner.gnm1.ann1.9UEQ51 Arachis hypogaea HOM05D005825 ORTHO05D006483 1.1e-44 183.3 118 75.4
AT2G26680 Arabidopsis thaliana HOM05D005825 ORTHO05D006483 1.8e-44 182.6 118 76.3
Carub.0004s0696 Capsella rubella HOM05D005825 ORTHO05D006483 1.8e-44 182.6 118 76.3
MD02G1032800 Malus domestica HOM05D005825 ORTHO05D006483 1.8e-44 182.6 118 72.9
Sp4g09150 Schrenkiella parvula HOM05D005825 ORTHO05D006483 1.8e-44 182.6 118 74.6
AUR62013360 Chenopodium quinoa HOM05D005825 ORTHO05D006483 2.4e-44 182.2 121 74.4
Glyma.13G167400 Glycine max HOM05D005825 ORTHO05D006483 2.4e-44 182.2 121 74.4
Lalb_Chr13g0301881 Lupinus albus HOM05D005825 ORTHO05D006483 2.4e-44 182.2 121 75.2
AUR62011128 Chenopodium quinoa HOM05D005825 ORTHO05D006483 3.1e-44 181.8 121 73.6
Psat4g040200 Pisum sativum HOM05D005825 ORTHO05D006483 3.1e-44 181.8 121 74.4
HanXRQChr17g0537731 Helianthus annuus HOM05D005825 ORTHO05D006483 4.1e-44 181.4 118 77.1
arahy.Tifrunner.gnm1.ann1.R6UVTB Arachis hypogaea HOM05D005825 ORTHO05D006483 7.0e-44 180.6 118 74.6
A04p21320 Brassica napus HOM05D005825 ORTHO05D006483 7.0e-44 180.6 118 74.6
BraA04t17698Z Brassica rapa HOM05D005825 ORTHO05D006483 7.0e-44 180.6 118 74.6
Prupe.7G242700 Prunus persica HOM05D005825 ORTHO05D006483 7.0e-44 180.6 118 72.9
ATR0225G021 Amborella trichopoda HOM05D005825 ORTHO05D006483 1.6e-43 179.5 119 73.9
BcaC02g08209 Brassica carinata HOM05D005825 ORTHO05D006483 1.6e-43 179.5 118 73.7
C04p57230 Brassica napus HOM05D005825 ORTHO05D006483 1.6e-43 179.5 118 73.7
BolC4t27250H Brassica oleracea HOM05D005825 ORTHO05D006483 1.6e-43 179.5 118 73.7
SalBow3G4290 Salvia bowleyana HOM05D005825 ORTHO05D006483 1.6e-43 179.5 121 74.4
Hund09127 Selenicereus undatus HOM05D005825 ORTHO05D006483 2.0e-43 179.1 121 74.4
BcaB06g28186 Brassica carinata HOM05D005825 ORTHO05D006483 2.7e-43 178.7 118 73.7
EL10Ac8g18654 Beta vulgaris HOM05D005825 ORTHO05D006483 3.5e-43 178.3 118 74.6
Glyma.17G115000 Glycine max HOM05D005825 ORTHO05D006483 3.5e-43 178.3 121 73.6
Nitab4.5_0014105g0010 Nicotiana tabacum HOM05D005825 ORTHO05D006483 4.5e-43 177.9 111 80.2
Os03g0566600 Oryza sativa ssp. japonica HOM05D005825 ORTHO05D006483 4.5e-43 177.9 119 71.4
SGA_v2.0_scaffold299G47720 Striga asiatica HOM05D005825 ORTHO05D006483 4.5e-43 177.9 121 73.6
VMungo1215G3451 Vigna mungo HOM05D005825 ORTHO05D006483 4.5e-43 177.9 118 72.9
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 5.9e-43 177.6 110 80.0
CARHR118590 Cardamine hirsuta HOM05D005825 ORTHO05D006483 1.0e-42 176.8 118 72.0
Migut.B01717 Erythranthe guttata HOM05D005825 ORTHO05D006483 1.0e-42 176.8 121 73.6
Nitab4.5_0002658g0050 Nicotiana tabacum HOM05D005825 ORTHO05D006483 1.0e-42 176.8 111 80.2
Zm00001eb043030 Zea mays HOM05D005825 ORTHO05D006483 1.7e-42 176.0 118 68.6
Eucgr.B02447 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.2e-42 175.6 95 93.7
Thhalv10002044m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 2.9e-42 175.3 118 72.0
CDE04G1080 Ceratophyllum demersum HOM05D005825 ORTHO05D006483 3.8e-42 174.9 119 72.3
unitig_748.g8100 Utricularia gibba HOM05D005825 ORTHO05D006483 8.5e-42 173.7 119 73.9
Haze_25579 Corylus avellana HOM05D005825 ORTHO05D006483 4.7e-40 167.9 110 77.3
Thhalv10023596m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 4.7e-40 167.9 118 71.2
SHI03392 Sapria himalayana HOM05D005825 ORTHO05D006483 1.0e-39 166.8 119 65.5
AagrBONN_evm.TU.Sc2ySwM_344.1792 Anthoceros agrestis HOM05D005825 ORTHO05D006483 7.3e-33 144.1 118 56.8
HanXRQChr06g0180341 Helianthus annuus HOM05D005825 ORTHO05D006483 2.8e-32 142.1 85 82.4
SMO147G0115 Selaginella moellendorffii HOM05D005825 ORTHO05D006483 3.2e-28 128.6 120 54.2
CAN.G204.2 Capsicum annuum HOM05D005825 ORTHO05D006483 1.0e-18 97.1 72 65.3


User provided reference genes

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