Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B02388 Eucalyptus grandis HOM05D004887 ORTHO05D006168 1.8e-204 715.7 359 100.0
PGR102G2111 Punica granatum HOM05D004887 ORTHO05D006168 2.4e-172 609.0 356 82.6
Cpa.g.sc190.13 Carica papaya HOM05D004887 ORTHO05D006168 2.1e-165 585.9 356 80.3
RcHm_v2.0_Chr5g0063631 Rosa chinensis HOM05D004887 ORTHO05D006168 8.1e-165 583.9 356 80.1
Gohir.A03G039700 Gossypium hirsutum HOM05D004887 ORTHO05D006168 1.8e-164 582.8 357 79.3
COL.COLO4_18471 Corchorus olitorius HOM05D004887 ORTHO05D006168 6.9e-164 580.9 359 79.1
Duzib150G1309 Durio zibethinus HOM05D004887 ORTHO05D006168 3.4e-163 578.6 357 79.8
FAN21G1310 Fragaria x ananassa HOM05D004887 ORTHO05D006168 3.4e-163 578.6 356 79.2
FvH4_3g35470 Fragaria vesca HOM05D004887 ORTHO05D006168 7.6e-163 577.4 356 79.2
Gohir.D03G128400 Gossypium hirsutum HOM05D004887 ORTHO05D006168 1.3e-162 576.6 357 78.4
Gorai.003G135100 Gossypium raimondii HOM05D004887 ORTHO05D006168 3.8e-162 575.1 357 78.2
MD11G1143700 Malus domestica HOM05D004887 ORTHO05D006168 1.1e-161 573.5 356 78.1
CANSAT54G1644 Cannabis sativa HOM05D004887 ORTHO05D006168 7.1e-161 570.9 363 78.5
Phvul.011G065900 Phaseolus vulgaris HOM05D004887 ORTHO05D006168 7.1e-161 570.9 356 76.1
Prupe.6G081500 Prunus persica HOM05D004887 ORTHO05D006168 9.3e-161 570.5 351 79.2
VMungo1127G0043 Vigna mungo HOM05D004887 ORTHO05D006168 4.6e-160 568.2 356 76.1
MD03G1097100 Malus domestica HOM05D004887 ORTHO05D006168 1.3e-159 566.6 356 78.4
Glyma.11G141400 Glycine max HOM05D004887 ORTHO05D006168 2.3e-159 565.8 356 76.4
arahy.Tifrunner.gnm1.ann1.31UC9J Arachis hypogaea HOM05D004887 ORTHO05D006168 1.1e-158 563.5 357 75.9
Potri.001G237000 Populus trichocarpa HOM05D004887 ORTHO05D006168 1.5e-158 563.1 347 79.5
arahy.Tifrunner.gnm1.ann1.1V42NR Arachis hypogaea HOM05D004887 ORTHO05D006168 3.3e-158 562.0 357 75.6
TPR.G10217 Trifolium pratense HOM05D004887 ORTHO05D006168 2.8e-157 558.9 356 74.4
GSVIVG01025008001 Vitis vinifera HOM05D004887 ORTHO05D006168 4.8e-157 558.1 355 77.2
CiPaw.13G097700 Carya illinoinensis HOM05D004887 ORTHO05D006168 1.8e-156 556.2 360 76.7
Medtr4g063570 Medicago truncatula HOM05D004887 ORTHO05D006168 9.0e-156 553.9 356 73.0
Dinv32870 Davidia involucrata HOM05D004887 ORTHO05D006168 3.4e-155 552.0 356 77.0
Hma1.2p1_0624F.1_g191380 Hydrangea macrophylla HOM05D004887 ORTHO05D006168 3.4e-155 552.0 356 77.2
Lalb_Chr01g0003761 Lupinus albus HOM05D004887 ORTHO05D006168 3.4e-155 552.0 352 75.6
Manes.11G133000 Manihot esculenta HOM05D004887 ORTHO05D006168 4.5e-155 551.6 353 77.6
TAR369G0226 Trochodendron aralioides HOM05D004887 ORTHO05D006168 4.5e-155 551.6 356 75.8
THA.LOC104799466 Tarenaya hassleriana HOM05D004887 ORTHO05D006168 2.2e-154 549.3 354 77.4
Manes.04G032300 Manihot esculenta HOM05D004887 ORTHO05D006168 3.8e-154 548.5 353 77.1
Aqoxy4G02983 Aquilegia oxysepala HOM05D004887 ORTHO05D006168 6.5e-154 547.7 356 75.8
Ciclev10028710m.g Citrus clementina HOM05D004887 ORTHO05D006168 6.5e-154 547.7 353 76.5
Migut.D02114 Erythranthe guttata HOM05D004887 ORTHO05D006168 1.4e-153 546.6 355 75.8
Migut.G01105 Erythranthe guttata HOM05D004887 ORTHO05D006168 1.4e-153 546.6 352 76.1
Glyma.12G064800 Glycine max HOM05D004887 ORTHO05D006168 1.9e-153 546.2 356 74.7
Lj3g0008400 Lotus japonicus HOM05D004887 ORTHO05D006168 2.5e-153 545.8 356 74.2
Duzib168G0637 Durio zibethinus HOM05D004887 ORTHO05D006168 5.5e-153 544.7 357 75.9
Migut.G01142 Erythranthe guttata HOM05D004887 ORTHO05D006168 5.5e-153 544.7 352 75.9
MBI14_g18541_MAGBIO Magnolia biondii HOM05D004887 ORTHO05D006168 9.3e-153 543.9 358 75.4
Potri.009G028500 Populus trichocarpa HOM05D004887 ORTHO05D006168 1.6e-152 543.1 355 75.8
Gorai.004G004400 Gossypium raimondii HOM05D004887 ORTHO05D006168 7.9e-152 540.8 357 75.1
Gohir.D08G010900 Gossypium hirsutum HOM05D004887 ORTHO05D006168 1.3e-151 540.0 357 74.8
BcaB08g36206 Brassica carinata HOM05D004887 ORTHO05D006168 2.3e-151 539.3 349 76.8
Hund18927 Selenicereus undatus HOM05D004887 ORTHO05D006168 2.3e-151 539.3 357 73.9
Nitab4.5_0000610g0150 Nicotiana tabacum HOM05D004887 ORTHO05D006168 1.1e-150 537.0 351 75.8
AT5G59960 Arabidopsis thaliana HOM05D004887 ORTHO05D006168 1.5e-150 536.6 351 75.8
Thhalv10013947m.g Eutrema salsugineum HOM05D004887 ORTHO05D006168 2.5e-150 535.8 349 76.5
CsaV3_1G033620 Cucumis sativus L. HOM05D004887 ORTHO05D006168 4.3e-150 535.0 351 75.2
BraA10t43799Z Brassica rapa HOM05D004887 ORTHO05D006168 5.7e-150 534.6 350 76.3
BcaC04g19652 Brassica carinata HOM05D004887 ORTHO05D006168 7.4e-150 534.3 350 76.0
C09p52470 Brassica napus HOM05D004887 ORTHO05D006168 7.4e-150 534.3 350 76.0
BolC9t58114H Brassica oleracea HOM05D004887 ORTHO05D006168 7.4e-150 534.3 350 76.0
Sp6g21640 Schrenkiella parvula HOM05D004887 ORTHO05D006168 7.4e-150 534.3 350 75.7
A10p17180 Brassica napus HOM05D004887 ORTHO05D006168 9.7e-150 533.9 350 76.3
PSO384G2944 Papaver somniferum HOM05D004887 ORTHO05D006168 1.6e-149 533.1 355 72.1
PSO339G5095 Papaver somniferum HOM05D004887 ORTHO05D006168 1.1e-148 530.4 355 72.1
Sc21g0005570 Simmondsia chinensis HOM05D004887 ORTHO05D006168 1.8e-148 529.6 355 72.4
EL10Ac7g15978 Beta vulgaris HOM05D004887 ORTHO05D006168 2.4e-148 529.3 353 71.1
Solyc11g073300.2 Solanum lycopersicum HOM05D004887 ORTHO05D006168 5.3e-148 528.1 352 75.0
Sopen11g030920 Solanum pennellii HOM05D004887 ORTHO05D006168 6.9e-148 527.7 352 74.7
Actinidia37217 Actinidia chinensis HOM05D004887 ORTHO05D006168 2.0e-147 526.2 342 75.7
Migut.N02667 Erythranthe guttata HOM05D004887 ORTHO05D006168 2.0e-147 526.2 350 72.9
A03p11380 Brassica napus HOM05D004887 ORTHO05D006168 2.6e-147 525.8 352 75.9
DCAR_018895 Daucus carota HOM05D004887 ORTHO05D006168 4.5e-147 525.0 359 71.0
MSTRG.17840 Avicennia marina HOM05D004887 ORTHO05D006168 1.3e-146 523.5 356 72.8
AL781U10010 Arabidopsis lyrata HOM05D004887 ORTHO05D006168 2.9e-146 522.3 339 76.4
Nn2g12934 Nelumbo nucifera HOM05D004887 ORTHO05D006168 2.9e-146 522.3 352 72.7
AL8G36530 Arabidopsis lyrata HOM05D004887 ORTHO05D006168 3.8e-146 521.9 378 70.1
CAN.G661.4 Capsicum annuum HOM05D004887 ORTHO05D006168 5.0e-146 521.5 353 73.4
Cc01_g12500 Coffea canephora HOM05D004887 ORTHO05D006168 6.5e-146 521.2 345 73.6
Oeu041027.1 Olea europaea HOM05D004887 ORTHO05D006168 6.5e-146 521.2 356 72.5
ClCG03G001950 Citrullus lanatus HOM05D004887 ORTHO05D006168 1.4e-145 520.0 375 70.7
HanXRQChr04g0107001 Helianthus annuus HOM05D004887 ORTHO05D006168 1.0e-143 513.8 362 69.3
Aa31LG1G12090 Aethionema arabicum HOM05D004887 ORTHO05D006168 1.4e-143 513.5 355 73.0
arahy.Tifrunner.gnm1.ann1.LTG2DU Arachis hypogaea HOM05D004887 ORTHO05D006168 2.8e-141 505.8 373 66.8
HPP92_015526 Vanilla planifolia HOM05D004887 ORTHO05D006168 3.7e-141 505.4 357 70.0
TWI79G0894 Tripterygium wilfordii HOM05D004887 ORTHO05D006168 4.8e-141 505.0 303 78.9
Lsat_1_v5_gn_9_22360 Lactuca sativa HOM05D004887 ORTHO05D006168 5.9e-139 498.0 350 69.1
ECA247G3571 Erigeron canadensis HOM05D004887 ORTHO05D006168 2.9e-138 495.7 343 70.0
Peaxi162Scf00406g00137 Petunia axillaris HOM05D004887 ORTHO05D006168 3.8e-138 495.4 351 70.7
Os01g0151600 Oryza sativa ssp. japonica HOM05D004887 ORTHO05D006168 6.5e-138 494.6 347 69.2
Lsat_1_v5_gn_8_77921 Lactuca sativa HOM05D004887 ORTHO05D006168 1.4e-137 493.4 351 68.9
QL01p032955 Quercus lobata HOM05D004887 ORTHO05D006168 1.6e-136 490.0 341 73.6
Nitab4.5_0003782g0060 Nicotiana tabacum HOM05D004887 ORTHO05D006168 2.3e-135 486.1 351 70.7
HanXRQChr06g0175771 Helianthus annuus HOM05D004887 ORTHO05D006168 6.7e-135 484.6 343 69.7
Psat7g217880 Pisum sativum HOM05D004887 ORTHO05D006168 6.7e-135 484.6 383 64.2
SalBow3G3342 Salvia bowleyana HOM05D004887 ORTHO05D006168 2.6e-134 482.6 378 64.8
FAN11G2539 Fragaria x ananassa HOM05D004887 ORTHO05D006168 1.7e-133 479.9 342 72.8
Atru.chr3.3838 Acer truncatum HOM05D004887 ORTHO05D006168 8.2e-133 477.6 302 81.1
FAN25G2556 Fragaria x ananassa HOM05D004887 ORTHO05D006168 8.2e-133 477.6 342 71.9
Cfa011464 Carpinus fangiana HOM05D004887 ORTHO05D006168 1.4e-132 476.9 346 72.0
Haze_24049 Corylus avellana HOM05D004887 ORTHO05D006168 7.7e-131 471.1 300 79.7
arahy.Tifrunner.gnm1.ann1.RHUE9Y Arachis hypogaea HOM05D004887 ORTHO05D006168 1.3e-130 470.3 304 71.4
AUR62009609 Chenopodium quinoa HOM05D004887 ORTHO05D006168 1.7e-130 469.9 316 72.5
CSS0023093 Camellia sinensis var. sinensis HOM05D004887 ORTHO05D006168 1.6e-128 463.4 336 71.7
Duzib170G0837 Durio zibethinus HOM05D004887 ORTHO05D006168 2.1e-128 463.0 372 66.1
Zm00001eb124290 Zea mays HOM05D004887 ORTHO05D006168 4.7e-128 461.8 341 66.6
MELO3C020709.2 Cucumis melo HOM05D004887 ORTHO05D006168 6.1e-128 461.5 302 73.2
Rhsim13G0085300 Rhododendron simsii HOM05D001446 ORTHO05D001360 4.4e-126 455.3 396 59.8
CSS0048955 Camellia sinensis var. sinensis HOM05D004887 ORTHO05D006168 2.8e-125 452.6 359 66.3
SGA_v2.0_scaffold61G21266 Striga asiatica HOM05D004887 ORTHO05D006168 1.0e-122 444.1 347 70.0
Lj1A157T41 Lonicera japonica HOM05D004887 ORTHO05D006168 4.2e-121 438.7 313 69.3
AUR62001822 Chenopodium quinoa HOM05D004887 ORTHO05D006168 5.5e-121 438.3 299 71.9
Sed0009981 Sechium edule HOM05D004887 ORTHO05D006168 7.2e-121 438.0 281 74.4
CDE07G1169 Ceratophyllum demersum HOM05D004887 ORTHO05D006168 1.4e-119 433.7 317 69.7
THA.LOC104810819 Tarenaya hassleriana HOM05D004887 ORTHO05D006168 1.4e-119 433.7 328 69.5
Carub.0008s2049 Capsella rubella HOM05D004887 ORTHO05D006168 4.4e-118 428.7 254 80.3
BraA03t10452Z Brassica rapa HOM05D004887 ORTHO05D006168 9.7e-118 427.6 254 80.7
TWI31G1179 Tripterygium wilfordii HOM05D004887 ORTHO05D006168 2.8e-117 426.0 359 61.0
ATR0559G318 Amborella trichopoda HOM05D004887 ORTHO05D006168 4.5e-115 418.7 301 70.1
unitig_899.g14894 Utricularia gibba HOM05D004887 ORTHO05D006168 4.7e-112 408.7 298 68.5
FAN16G2077 Fragaria x ananassa HOM05D001446 ORTHO05D001360 2.3e-111 406.4 264 78.0
Thecc.09G325700 Theobroma cacao HOM05D004887 ORTHO05D006168 6.8e-111 404.8 251 81.3
Psat7g218040 Pisum sativum HOM05D004887 ORTHO05D006168 1.2e-110 404.1 296 66.9
Sabra16G0142900 Salix brachista HOM05D001446 ORTHO05D001360 1.8e-108 396.7 387 59.2
Ca_19183_v3 Cicer arietinum L. HOM05D004887 ORTHO05D006168 8.9e-103 377.9 257 73.2
Actinidia07046 Actinidia chinensis HOM05D004887 ORTHO05D006168 8.3e-101 371.3 254 73.2
Lj2C1057T15 Lonicera japonica HOM05D004887 ORTHO05D006168 2.0e-99 366.7 234 72.2
TAR623G0510 Trochodendron aralioides HOM05D004887 ORTHO05D006168 3.5e-99 365.9 257 73.2
Pp3c8_24390 Physcomitrium patens HOM05D004887 ORTHO05D006168 5.9e-99 365.2 342 54.1
Pp3c24_20310 Physcomitrium patens HOM05D004887 ORTHO05D006168 2.3e-98 363.2 355 51.5
vmacro03096 Vaccinium macrocarpon HOM05D004887 ORTHO05D006168 1.2e-96 357.5 308 63.0
Mapoly0001s0555 Marchantia polymorpha HOM05D004887 ORTHO05D006168 5.2e-95 352.1 357 51.3
Dinv03548 Davidia involucrata HOM05D004887 ORTHO05D006168 8.3e-93 344.7 232 76.3
SMO118G0033 Selaginella moellendorffii HOM05D004887 ORTHO05D006168 1.0e-90 337.8 345 50.7
SalBow2G3032 Salvia bowleyana HOM05D004887 ORTHO05D006168 9.5e-89 331.3 257 66.1
Nn2g10420 Nelumbo nucifera HOM05D004887 ORTHO05D006168 3.4e-86 322.8 226 70.8
Gohir.A08G000181 Gossypium hirsutum HOM05D004887 ORTHO05D006168 9.8e-86 321.2 233 71.7
CARHR273590 Cardamine hirsuta HOM05D004887 ORTHO05D006168 7.0e-84 315.1 190 78.9
AagrBONN_evm.TU.Sc2ySwM_344.5355 Anthoceros agrestis HOM05D004887 ORTHO05D006168 3.5e-83 312.8 283 51.6
CBR_g46654 Chara braunii HOM05D004887 ORTHO05D006168 4.4e-78 295.8 340 45.9
Psat7g218000 Pisum sativum HOM05D004887 ORTHO05D006168 2.2e-77 293.5 195 71.3
PSO384G0451 Papaver somniferum HOM05D004887 ORTHO05D006168 4.9e-61 239.2 187 65.8
Nitab4.5_0000610g0050 Nicotiana tabacum HOM05D004887 ORTHO05D006168 6.6e-58 228.8 362 41.2
CARHR273600 Cardamine hirsuta HOM05D004887 ORTHO05D006168 1.6e-56 224.2 158 72.2
Sabra09G0019700 Salix brachista HOM05D004887 ORTHO05D006168 9.6e-49 198.4 180 62.8
Carub.0008s2068 Capsella rubella HOM05D004887 ORTHO05D006168 1.6e-32 144.4 98 68.4
Duzib205G1865 Durio zibethinus HOM05D004887 ORTHO05D006168 6.5e-29 132.5 136 53.7
BolC6t35622H Brassica oleracea HOM05D004887 ORTHO05D006168 3.2e-28 130.2 78 74.4
C06p04980 Brassica napus HOM05D004887 ORTHO05D006168 4.2e-28 129.8 73 75.3
A02p35440 Brassica napus HOM05D004887 ORTHO05D006168 9.4e-28 128.6 73 75.3
BraA02t08545Z Brassica rapa HOM05D004887 ORTHO05D006168 9.4e-28 128.6 73 75.3
C03p13170 Brassica napus HOM05D004887 ORTHO05D006168 2.1e-27 127.5 73 76.7
BolC3t13778H Brassica oleracea HOM05D004887 ORTHO05D006168 8.8e-26 122.1 61 88.5
C03p13130 Brassica napus HOM05D004887 ORTHO05D006168 1.6e-19 101.3 98 58.2
HanXRQChr07g0192801 Helianthus annuus HOM05D004887 ORTHO05D225384 1.3e-08 65.1 55 61.8
Lj1A771T11 Lonicera japonica HOM05D004887 ORTHO05D234499 1.1e-07 62.0 40 75.0
HanXRQChr05g0134321 Helianthus annuus HOM05D004887 ORTHO05D025733 3.5e-06 57.0 46 56.5


User provided reference genes

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