Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B02327 Eucalyptus grandis HOM05D004998 ORTHO05D006104 5.9e-98 360.9 188 100.0
Dinv17028 Davidia involucrata HOM05D004998 ORTHO05D006104 1.7e-49 199.9 186 60.2
Dinv42976 Davidia involucrata HOM05D004998 ORTHO05D006104 1.7e-49 199.9 186 60.2
Dinv43123 Davidia involucrata HOM05D004998 ORTHO05D006104 1.7e-49 199.9 186 60.2
TWI75G0636 Tripterygium wilfordii HOM05D004998 ORTHO05D006104 1.5e-48 196.8 188 59.6
Ciclev10029345m.g Citrus clementina HOM05D004998 ORTHO05D006104 2.8e-47 192.6 182 58.2
Prupe.6G073200 Prunus persica HOM05D004998 ORTHO05D006104 6.2e-47 191.4 187 60.4
Cfa011521 Carpinus fangiana HOM05D004998 ORTHO05D006104 3.1e-46 189.1 187 56.7
Atru.chr3.3979 Acer truncatum HOM05D004998 ORTHO05D006104 1.2e-45 187.2 187 56.7
Lj1A149T62 Lonicera japonica HOM05D004998 ORTHO05D006104 1.2e-45 187.2 187 57.2
Actinidia34418 Actinidia chinensis HOM05D004998 ORTHO05D006104 1.5e-45 186.8 186 56.5
TWI79G0863 Tripterygium wilfordii HOM05D004998 ORTHO05D006104 1.5e-45 186.8 187 54.5
CSS0033668 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 4.4e-45 185.3 188 56.9
CiPaw.14G067400 Carya illinoinensis HOM05D004998 ORTHO05D006104 7.5e-45 184.5 186 56.5
PGR102G0830 Punica granatum HOM05D004998 ORTHO05D006104 9.8e-45 184.1 189 57.1
MD11G1097800 Malus domestica HOM05D004998 ORTHO05D006104 1.3e-44 183.7 187 57.8
CSS0032367 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 3.7e-44 182.2 186 55.9
Actinidia23927 Actinidia chinensis HOM05D004998 ORTHO05D006104 8.3e-44 181.0 185 55.7
GSVIVG01024930001 Vitis vinifera HOM05D004998 ORTHO05D006104 8.3e-44 181.0 187 55.1
QL01p031100 Quercus lobata HOM05D004998 ORTHO05D006104 5.4e-43 178.3 189 56.1
Phvul.L006843 Phaseolus vulgaris HOM05D004998 ORTHO05D006104 1.6e-42 176.8 182 56.0
TAR633G0520 Trochodendron aralioides HOM05D004998 ORTHO05D006104 1.6e-42 176.8 187 53.5
Glyma.15G036800 Glycine max HOM05D004998 ORTHO05D006104 6.0e-42 174.9 188 53.7
THA.LOC104810769 Tarenaya hassleriana HOM05D004998 ORTHO05D006104 6.0e-42 174.9 186 55.4
Nn2g11147 Nelumbo nucifera HOM05D004998 ORTHO05D006104 1.3e-41 173.7 189 53.4
Potri.009G033400 Populus trichocarpa HOM05D004998 ORTHO05D006104 1.3e-41 173.7 180 57.8
Hma1.2p1_0615F.1_g189810 Hydrangea macrophylla HOM05D004998 ORTHO05D006104 8.6e-41 171.0 187 51.9
TAR636G1117 Trochodendron aralioides HOM05D004998 ORTHO05D006104 1.5e-40 170.2 188 52.1
CsaV3_6G016720 Cucumis sativus L. HOM05D004998 ORTHO05D006104 2.5e-40 169.5 186 52.2
FvH4_3g36750 Fragaria vesca HOM05D004998 ORTHO05D006104 2.5e-40 169.5 189 56.1
Glyma.13G337700 Glycine max HOM05D004998 ORTHO05D006104 4.3e-40 168.7 188 53.2
Rhsim13G0078800 Rhododendron simsii HOM05D004998 ORTHO05D006104 7.3e-40 167.9 187 52.9
ClCG02G020020 Citrullus lanatus HOM05D004998 ORTHO05D006104 1.6e-39 166.8 183 51.4
Sabra09G0023800 Salix brachista HOM05D004998 ORTHO05D006104 2.1e-39 166.4 180 56.7
FAN11G2014 Fragaria x ananassa HOM05D004998 ORTHO05D006104 2.8e-39 166.0 189 56.1
VMungo1080G1028 Vigna mungo HOM05D004998 ORTHO05D006104 3.6e-39 165.6 189 52.4
MD03G1088800 Malus domestica HOM05D004998 ORTHO05D006104 4.7e-39 165.2 187 52.9
Hund18896 Selenicereus undatus HOM05D004998 ORTHO05D006104 4.7e-39 165.2 187 53.5
Lalb_Chr03g0026531 Lupinus albus HOM05D004998 ORTHO05D006104 6.2e-39 164.9 190 53.7
Cc01_g13080 Coffea canephora HOM05D004998 ORTHO05D006104 8.1e-39 164.5 191 52.4
vmacro03047 Vaccinium macrocarpon HOM05D004998 ORTHO05D006104 1.1e-38 164.1 187 51.3
Lj3g0014072 Lotus japonicus HOM05D004998 ORTHO05D006104 1.4e-38 163.7 182 52.7
arahy.Tifrunner.gnm1.ann1.JSTV8M Arachis hypogaea HOM05D004998 ORTHO05D006104 1.8e-38 163.3 189 53.4
Lsat_1_v5_gn_9_23841 Lactuca sativa HOM05D004998 ORTHO05D006104 1.8e-38 163.3 187 53.5
Thecc.09G318900 Theobroma cacao HOM05D004998 ORTHO05D006104 1.8e-38 163.3 184 54.3
arahy.Tifrunner.gnm1.ann1.AD2TJP Arachis hypogaea HOM05D004998 ORTHO05D006104 3.1e-38 162.5 189 52.9
Manes.01G171600 Manihot esculenta HOM05D004998 ORTHO05D006104 4.0e-38 162.2 189 55.6
CiPaw.13G091800 Carya illinoinensis HOM05D004998 ORTHO05D006104 5.2e-38 161.8 178 53.4
DCAR_005961 Daucus carota HOM05D004998 ORTHO05D006104 6.8e-38 161.4 189 52.4
MELO3C025903.2 Cucumis melo HOM05D004998 ORTHO05D006104 1.2e-37 160.6 183 52.5
Migut.D02075 Erythranthe guttata HOM05D004998 ORTHO05D006104 1.5e-37 160.2 187 49.7
RcHm_v2.0_Chr5g0065711 Rosa chinensis HOM05D004998 ORTHO05D006104 2.0e-37 159.8 188 53.7
SGA_v2.0_scaffold41G15739 Striga asiatica HOM05D004998 ORTHO05D006104 2.6e-37 159.5 189 51.9
Duzib150G0269 Durio zibethinus HOM05D004998 ORTHO05D006104 3.4e-37 159.1 182 55.5
FAN21G1380 Fragaria x ananassa HOM05D004998 ORTHO05D006104 4.4e-37 158.7 194 54.1
MBI14_g12121_MAGBIO Magnolia biondii HOM05D004998 ORTHO05D006104 1.7e-36 156.8 184 51.1
EL10Ac7g16043 Beta vulgaris HOM05D004998 ORTHO05D006104 6.4e-36 154.8 189 52.4
Medtr2g097480 Medicago truncatula HOM05D004998 ORTHO05D006104 6.4e-36 154.8 189 51.3
Gohir.A05G094300 Gossypium hirsutum HOM05D004998 ORTHO05D006104 1.1e-35 154.1 182 53.3
FAN16G3214 Fragaria x ananassa HOM05D004998 ORTHO05D006104 2.4e-35 152.9 207 52.2
AUR62009547 Chenopodium quinoa HOM05D004998 ORTHO05D006104 3.2e-35 152.5 188 50.5
SalBow3G1756 Salvia bowleyana HOM05D004998 ORTHO05D006104 4.1e-35 152.1 187 49.2
AUR62001761 Chenopodium quinoa HOM05D004998 ORTHO05D006104 5.4e-35 151.8 188 50.0
HanXRQChr07g0197281 Helianthus annuus HOM05D004998 ORTHO05D006104 5.4e-35 151.8 184 50.0
Duzib168G2185 Durio zibethinus HOM05D004998 ORTHO05D006104 9.2e-35 151.0 182 50.0
COL.COLO4_18543 Corchorus olitorius HOM05D004998 ORTHO05D006104 2.7e-34 149.4 184 48.4
Nn2g13381 Nelumbo nucifera HOM05D004998 ORTHO05D006104 2.7e-34 149.4 187 48.7
Nitab4.5_0000272g0050 Nicotiana tabacum HOM05D004998 ORTHO05D006104 2.7e-34 149.4 201 48.3
Aqoxy1G00915 Aquilegia oxysepala HOM05D004998 ORTHO05D006104 7.8e-34 147.9 190 50.0
CANSAT54G1321 Cannabis sativa HOM05D004998 ORTHO05D006104 1.0e-33 147.5 182 49.5
Solyc06g005600.3 Solanum lycopersicum HOM05D004998 ORTHO05D006104 2.3e-33 146.4 188 48.9
Sopen06g001560 Solanum pennellii HOM05D004998 ORTHO05D006104 2.3e-33 146.4 188 48.9
HanXRQChr12g0374241 Helianthus annuus HOM05D004998 ORTHO05D006104 3.9e-33 145.6 186 49.5
ECA247G2861 Erigeron canadensis HOM05D004998 ORTHO05D006104 6.6e-33 144.8 193 49.7
Psat5g285160 Pisum sativum HOM05D004998 ORTHO05D006104 6.6e-33 144.8 185 47.0
CARHR285830 Cardamine hirsuta HOM05D004998 ORTHO05D006104 1.5e-32 143.7 186 51.1
AL8G35930 Arabidopsis lyrata HOM05D004998 ORTHO05D006104 4.3e-32 142.1 187 50.8
Carub.0008s2013 Capsella rubella HOM05D004998 ORTHO05D006104 4.3e-32 142.1 187 50.3
PGSC0003DMG400002149 Solanum tuberosum HOM05D004998 ORTHO05D006104 9.5e-32 141.0 190 47.9
C03p13690 Brassica napus HOM05D004998 ORTHO05D006104 2.8e-31 139.4 190 48.9
Peaxi162Scf00092g01117 Petunia axillaris HOM05D004998 ORTHO05D006104 3.6e-31 139.0 187 46.0
Sp6g21150 Schrenkiella parvula HOM05D004998 ORTHO05D006104 4.7e-31 138.7 190 48.4
Aa31LG4G15620 Aethionema arabicum HOM05D004998 ORTHO05D006104 1.1e-30 137.5 186 46.8
TPR.G5593 Trifolium pratense HOM05D004998 ORTHO05D006104 1.1e-30 137.5 190 48.9
Gohir.D05G094800 Gossypium hirsutum HOM05D004998 ORTHO05D006104 5.2e-30 135.2 182 49.5
Oeu053883.1 Olea europaea HOM05D004998 ORTHO05D006104 5.2e-30 135.2 169 47.3
AT5G59460 Arabidopsis thaliana HOM05D004998 ORTHO05D006104 2.6e-29 132.9 187 48.7
Gorai.009G098000 Gossypium raimondii HOM05D004998 ORTHO05D006104 7.6e-29 131.3 182 48.9
BcaB08g36256 Brassica carinata HOM05D004998 ORTHO05D006104 2.2e-28 129.8 182 47.3
Ah.08g219770 Amaranthus hybridus HOM05D004998 ORTHO05D006104 1.4e-27 127.1 197 46.7
ATR0559G067 Amborella trichopoda HOM05D004998 ORTHO05D006104 1.4e-27 127.1 184 45.1
Gohir.A03G043800 Gossypium hirsutum HOM05D004998 ORTHO05D006104 1.9e-27 126.7 177 52.0
Sed0008555 Sechium edule HOM05D004998 ORTHO05D006104 2.4e-27 126.3 182 46.2
Thhalv10014846m.g Eutrema salsugineum HOM05D004998 ORTHO05D006104 4.1e-27 125.6 188 45.2
Gohir.D03G123600 Gossypium hirsutum HOM05D004998 ORTHO05D006104 4.1e-27 125.6 177 52.5
MSTRG.18567 Avicennia marina HOM05D004998 ORTHO05D006104 5.4e-27 125.2 189 47.1
Haze_24126 Corylus avellana HOM05D004998 ORTHO05D006104 5.4e-27 125.2 103 65.0
Os01g0144600 Oryza sativa ssp. japonica HOM05D004998 ORTHO05D006104 3.5e-26 122.5 198 43.4
Gorai.003G130300 Gossypium raimondii HOM05D004998 ORTHO05D006104 1.0e-25 120.9 177 51.4
BraA02t05793Z Brassica rapa HOM05D004998 ORTHO05D006104 3.0e-25 119.4 190 45.8
Peaxi162Scf00122g01415 Petunia axillaris HOM05D004998 ORTHO05D006104 3.9e-25 119.0 188 41.5
BcaC03g14012 Brassica carinata HOM05D004998 ORTHO05D006104 5.1e-25 118.6 190 45.8
C02p12480 Brassica napus HOM05D004998 ORTHO05D006104 5.1e-25 118.6 190 45.8
BolC2t07348H Brassica oleracea HOM05D004998 ORTHO05D006104 5.1e-25 118.6 190 45.8
BcaB05g22508 Brassica carinata HOM05D004998 ORTHO05D006104 1.1e-24 117.5 192 45.3
PSO339G2709 Papaver somniferum HOM05D004998 ORTHO05D006104 2.5e-24 116.3 194 43.8
A02p07120 Brassica napus HOM05D004998 ORTHO05D006104 5.6e-24 115.2 189 45.0
Thhalv10002686m.g Eutrema salsugineum HOM05D004998 ORTHO05D006104 5.6e-24 115.2 189 43.4
CDE02G2808 Ceratophyllum demersum HOM05D004998 ORTHO05D006104 9.6e-24 114.4 184 43.5
BraA10t43749Z Brassica rapa HOM05D004998 ORTHO05D006104 1.2e-23 114.0 172 47.1
Dinv06259 Davidia involucrata HOM05D004998 ORTHO05D006104 2.1e-23 113.2 110 59.1
HPP92_006623 Vanilla planifolia HOM05D004998 ORTHO05D006104 8.1e-23 111.3 224 38.4
A10p16680 Brassica napus HOM05D004998 ORTHO05D006104 1.1e-22 110.9 172 46.5
Aa31LG1G11810 Aethionema arabicum HOM05D000959 ORTHO05D000775 6.9e-22 108.2 176 41.5
Nitab4.5_0006945g0010 Nicotiana tabacum HOM05D004998 ORTHO05D006104 1.5e-21 107.1 188 41.0
Sc12g0001370 Simmondsia chinensis HOM05D004998 ORTHO05D006104 9.9e-21 104.4 136 50.0
BolC3t13819H Brassica oleracea HOM05D004998 ORTHO05D006104 1.7e-20 103.6 155 47.7
Cpa.g.sc81.121 Carica papaya HOM05D004998 ORTHO05D006104 1.7e-20 103.6 75 68.0
CDE08G1537 Ceratophyllum demersum HOM05D004998 ORTHO05D006104 2.2e-20 103.2 146 45.2
C09p51870 Brassica napus HOM05D004998 ORTHO05D006104 4.9e-20 102.1 151 47.0
Nitab4.5_0007132g0030 Nicotiana tabacum HOM05D004998 ORTHO05D006104 7.1e-19 98.2 173 39.3
Zm00001eb124480 Zea mays HOM05D004998 ORTHO05D006104 1.0e-17 94.4 82 63.4
C03p13710 Brassica napus HOM05D004998 ORTHO05D006104 3.0e-17 92.8 141 45.4
FAN11G1834 Fragaria x ananassa HOM05D004998 ORTHO05D006104 1.1e-16 90.9 178 41.0
FvH4_3g41460 Fragaria vesca HOM05D004998 ORTHO05D006104 2.5e-16 89.7 178 40.4
BcaC04g19766 Brassica carinata HOM05D004998 ORTHO05D006104 1.6e-15 87.0 175 40.6
Lalb_Chr01g0003571 Lupinus albus HOM05D004998 ORTHO05D006104 6.2e-15 85.1 138 43.5
BolC9t58049H Brassica oleracea HOM05D004998 ORTHO05D006104 4.0e-14 82.4 175 37.1
FAN21G1361 Fragaria x ananassa HOM05D004998 ORTHO05D006104 4.0e-14 82.4 178 38.8
BcaB01g04577 Brassica carinata HOM05D004998 ORTHO05D006104 1.5e-13 80.5 150 44.0
BcaB08g36255 Brassica carinata HOM05D004998 ORTHO05D006104 1.5e-13 80.5 172 39.5
FAN25G2664 Fragaria x ananassa HOM05D004998 ORTHO05D006104 1.7e-12 77.0 180 37.8
BcaC01g06521 Brassica carinata HOM05D004998 ORTHO05D006104 2.4e-11 73.2 184 37.0
CSS0021101 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 2.4e-11 73.2 67 55.2
Mapoly0094s0023 Marchantia polymorpha HOM05D004998 ORTHO05D006104 4.6e-10 68.9 88 51.1
BcaC09g48433 Brassica carinata HOM05D004998 ORTHO05D006104 1.8e-09 67.0 219 33.3
Pp3c16_15780 Physcomitrium patens HOM05D004998 ORTHO05D006104 3.0e-09 66.2 193 31.6
SEGI_30466 Sequoiadendron giganteum HOM05D004998 ORTHO05D006104 3.0e-09 66.2 139 35.3
arahy.Tifrunner.gnm1.ann1.MN3VL9 Arachis hypogaea HOM05D004998 ORTHO05D006104 8.7e-09 64.7 84 47.6
unitig_37.g12674 Utricularia gibba HOM05D004998 ORTHO05D006104 8.7e-09 64.7 133 39.1
Oeu002429.1 Olea europaea HOM05D004998 ORTHO05D006104 1.5e-08 63.9 59 59.3
BolC1t04941H Brassica oleracea HOM05D004998 ORTHO05D006104 2.1e-07 60.1 231 32.0
SHI05935 Sapria himalayana HOM05D004998 ORTHO05D006104 6.2e-07 58.5 136 39.0


User provided reference genes

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