Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B02129 Eucalyptus grandis HOM05D006721 ORTHO05D000476 3.7e-58 228.0 117 100.0
PGR142G1199 Punica granatum HOM05D006721 ORTHO05D000476 4.4e-43 177.9 113 79.6
Manes.09G149900 Manihot esculenta HOM05D006721 ORTHO05D000476 9.8e-43 176.8 113 77.0
QL01p041965 Quercus lobata HOM05D006721 ORTHO05D000476 4.8e-42 174.5 115 79.1
Potri.019G014100 Populus trichocarpa HOM05D006721 ORTHO05D000476 8.3e-42 173.7 114 75.4
QL03p032184 Quercus lobata HOM05D006721 ORTHO05D000476 3.1e-41 171.8 115 78.3
QL03p032281 Quercus lobata HOM05D006721 ORTHO05D000476 3.1e-41 171.8 115 78.3
Ciclev10022930m.g Citrus clementina HOM05D006721 ORTHO05D000476 5.4e-41 171.0 114 74.6
Glyma.03G251900 Glycine max HOM05D006721 ORTHO05D000476 7.0e-41 170.6 115 76.5
Haze_04466 Corylus avellana HOM05D006721 ORTHO05D000476 3.5e-40 168.3 115 75.7
Sabra19G0016300 Salix brachista HOM05D006721 ORTHO05D000476 7.7e-40 167.2 114 74.6
Sabra19G0026800 Salix brachista HOM05D006721 ORTHO05D000476 7.7e-40 167.2 114 74.6
Lalb_Chr04g0262001 Lupinus albus HOM05D006721 ORTHO05D000476 1.0e-39 166.8 115 75.7
Atru.chr2.886 Acer truncatum HOM05D006721 ORTHO05D000476 1.3e-39 166.4 112 74.1
COL.COLO4_15417 Corchorus olitorius HOM05D006721 ORTHO05D000476 2.3e-39 165.6 114 73.7
THA.LOC104808031 Tarenaya hassleriana HOM05D006721 ORTHO05D000476 2.9e-39 165.2 114 75.4
Dinv14631 Davidia involucrata HOM05D006721 ORTHO05D000476 3.8e-39 164.9 107 75.7
Phvul.006G106600 Phaseolus vulgaris HOM05D006721 ORTHO05D000476 5.0e-39 164.5 115 73.9
Carub.0003s2825 Capsella rubella HOM05D006721 ORTHO05D000476 1.1e-38 163.3 106 79.2
Gohir.A13G168900 Gossypium hirsutum HOM05D006721 ORTHO05D000476 1.1e-38 163.3 114 72.8
Gohir.D13G174300 Gossypium hirsutum HOM05D006721 ORTHO05D000476 1.1e-38 163.3 114 72.8
Gorai.013G186500 Gossypium raimondii HOM05D006721 ORTHO05D000476 1.1e-38 163.3 114 72.8
Thecc.05G276800 Theobroma cacao HOM05D006721 ORTHO05D000476 1.9e-38 162.5 112 73.2
Cpa.g.sc162.11 Carica papaya HOM05D006721 ORTHO05D000476 3.3e-38 161.8 109 73.4
GSVIVG01036217001 Vitis vinifera HOM05D006721 ORTHO05D000476 4.2e-38 161.4 111 73.9
CiPaw.07G077700 Carya illinoinensis HOM05D006721 ORTHO05D000476 5.5e-38 161.0 108 77.8
TWI56G0396 Tripterygium wilfordii HOM05D006721 ORTHO05D000476 7.2e-38 160.6 115 72.2
TPR.G6950 Trifolium pratense HOM05D006721 ORTHO05D000476 9.5e-38 160.2 110 74.5
Lsat_1_v5_gn_2_107641 Lactuca sativa HOM05D006721 ORTHO05D000476 1.2e-37 159.8 106 74.5
Medtr7g116300 Medicago truncatula HOM05D006721 ORTHO05D000476 1.2e-37 159.8 110 74.5
Sp3g27300 Schrenkiella parvula HOM05D006721 ORTHO05D000476 2.1e-37 159.1 112 73.2
CARHR104660 Cardamine hirsuta HOM05D006721 ORTHO05D000476 3.6e-37 158.3 106 76.4
Lj1g0023872 Lotus japonicus HOM05D006721 ORTHO05D000476 3.6e-37 158.3 114 72.8
AT2G14045 Arabidopsis thaliana HOM05D006721 ORTHO05D000476 4.7e-37 157.9 108 75.0
CsaV3_2G003760 Cucumis sativus L. HOM05D006721 ORTHO05D000476 1.4e-36 156.4 113 69.0
Thhalv10023143m.g Eutrema salsugineum HOM05D006721 ORTHO05D000476 1.4e-36 156.4 112 70.5
Aa31LG8G12480 Aethionema arabicum HOM05D006721 ORTHO05D000476 2.3e-36 155.6 93 83.9
CSS0047325 Camellia sinensis var. sinensis HOM05D006721 ORTHO05D000476 2.3e-36 155.6 100 79.0
Psat3g006080 Pisum sativum HOM05D006721 ORTHO05D000476 2.3e-36 155.6 110 70.9
Prupe.6G347400 Prunus persica HOM05D006721 ORTHO05D000476 3.0e-36 155.2 114 72.8
Actinidia38949 Actinidia chinensis HOM05D006721 ORTHO05D000476 6.8e-36 154.1 106 71.7
HanXRQChr11g0322821 Helianthus annuus HOM05D006721 ORTHO05D000476 6.8e-36 154.1 102 75.5
Oeu058331.1 Olea europaea HOM05D006721 ORTHO05D000476 6.8e-36 154.1 102 74.5
Sed0018278 Sechium edule HOM05D006721 ORTHO05D000476 6.8e-36 154.1 113 67.3
BraA03t13647Z Brassica rapa HOM05D006721 ORTHO05D000476 8.9e-36 153.7 108 72.2
RcHm_v2.0_Chr3g0450141 Rosa chinensis HOM05D006721 ORTHO05D000476 8.9e-36 153.7 119 68.9
TAR365G0041 Trochodendron aralioides HOM05D006721 ORTHO05D000476 8.9e-36 153.7 106 73.6
Migut.F00814 Erythranthe guttata HOM05D006721 ORTHO05D000476 1.2e-35 153.3 102 74.5
Nn1g02669 Nelumbo nucifera HOM05D006721 ORTHO05D000476 1.2e-35 153.3 106 72.6
CANSAT54G3036 Cannabis sativa HOM05D006721 ORTHO05D000476 2.6e-35 152.1 114 68.4
Dinv18276 Davidia involucrata HOM05D006721 ORTHO05D000476 3.4e-35 151.8 98 76.5
EL10Ac4g09049 Beta vulgaris HOM05D006721 ORTHO05D000476 4.4e-35 151.4 98 75.5
vmacro10349 Vaccinium macrocarpon HOM05D006721 ORTHO05D000476 2.2e-34 149.1 102 71.6
AL3G45710 Arabidopsis lyrata HOM05D006721 ORTHO05D000476 3.7e-34 148.3 119 67.2
BcaC01g03109 Brassica carinata HOM05D006721 ORTHO05D000476 3.7e-34 148.3 106 72.6
BolC3t17881H Brassica oleracea HOM05D006721 ORTHO05D000476 3.7e-34 148.3 106 72.6
FvH4_6g02371 Fragaria vesca HOM05D006721 ORTHO05D000476 3.7e-34 148.3 119 67.2
FAN05G5208 Fragaria x ananassa HOM05D006721 ORTHO05D000476 3.7e-34 148.3 119 67.2
FAN14G0694 Fragaria x ananassa HOM05D004756 ORTHO05D005793 3.7e-34 148.3 119 67.2
Gorai.008G193300 Gossypium raimondii HOM05D006721 ORTHO05D000476 3.7e-34 148.3 108 70.4
Cc02_g09090 Coffea canephora HOM05D006721 ORTHO05D000476 4.9e-34 147.9 98 73.5
MSTRG.9005 Avicennia marina HOM05D006721 ORTHO05D000476 6.3e-34 147.5 106 68.9
Nitab4.5_0000930g0080 Nicotiana tabacum HOM05D006721 ORTHO05D000476 6.3e-34 147.5 98 75.5
Actinidia34741 Actinidia chinensis HOM05D006721 ORTHO05D000476 8.3e-34 147.1 106 69.8
Aqoxy2G03596 Aquilegia oxysepala HOM05D006721 ORTHO05D000476 8.3e-34 147.1 106 69.8
ECA238G3797 Erigeron canadensis HOM05D006721 ORTHO05D000476 8.3e-34 147.1 102 70.6
Hund06940 Selenicereus undatus HOM05D006721 ORTHO05D000476 1.1e-33 146.7 116 64.7
Gohir.D12G180151 Gossypium hirsutum HOM05D006721 ORTHO05D000476 1.4e-33 146.4 108 71.3
A03p45120 Brassica napus HOM05D006721 ORTHO05D000476 2.4e-33 145.6 103 71.8
Peaxi162Scf00135g00914 Petunia axillaris HOM05D006721 ORTHO05D000476 3.1e-33 145.2 101 74.3
HPP92_000759 Vanilla planifolia HOM05D006721 ORTHO05D000476 3.1e-33 145.2 108 70.4
Cfa006323 Carpinus fangiana HOM05D006721 ORTHO05D000476 4.1e-33 144.8 96 78.1
AUR62001066 Chenopodium quinoa HOM05D006721 ORTHO05D000476 4.1e-33 144.8 98 71.4
SGA_v2.0_scaffold90G27702 Striga asiatica HOM05D006721 ORTHO05D000476 5.4e-33 144.4 105 69.5
Ah.04g163750 Amaranthus hybridus HOM05D006721 ORTHO05D000476 1.2e-32 143.3 111 65.8
Os07g0185800 Oryza sativa ssp. japonica HOM05D006721 ORTHO05D000476 1.6e-32 142.9 91 74.7
FAN14G4094 Fragaria x ananassa HOM05D004756 ORTHO05D005793 2.7e-32 142.1 115 67.0
FAN02G4370 Fragaria x ananassa HOM05D006721 ORTHO05D000476 3.5e-32 141.7 116 66.4
Nitab4.5_0002651g0060 Nicotiana tabacum HOM05D006721 ORTHO05D000476 4.5e-32 141.4 112 67.0
AUR62004887 Chenopodium quinoa HOM05D006721 ORTHO05D000476 7.8e-32 140.6 98 70.4
MD12G1244800 Malus domestica HOM05D006721 ORTHO05D000476 7.8e-32 140.6 94 74.5
C03p55970 Brassica napus HOM05D006721 ORTHO05D000476 1.3e-31 139.8 101 72.3
Sc15g0002500 Simmondsia chinensis HOM05D006721 ORTHO05D000476 1.3e-31 139.8 82 84.1
Sopen04g004980 Solanum pennellii HOM05D006721 ORTHO05D000476 1.3e-31 139.8 112 66.1
FAN05G3615 Fragaria x ananassa HOM05D004756 ORTHO05D005793 1.7e-31 139.4 119 63.9
PSO210G7245 Papaver somniferum HOM05D006721 ORTHO05D000476 2.3e-31 139.0 109 68.8
PSO832G0589 Papaver somniferum HOM05D006721 ORTHO05D000476 2.3e-31 139.0 109 68.8
MBI19_g37090_MAGBIO Magnolia biondii HOM05D006721 ORTHO05D000476 5.0e-31 137.9 108 67.6
CDE06G1546 Ceratophyllum demersum HOM05D006721 ORTHO05D000476 6.6e-31 137.5 107 66.4
CAN.G186.72 Capsicum annuum HOM05D006721 ORTHO05D000476 8.6e-31 137.1 102 69.6
PGSC0003DMG400025428 Solanum tuberosum HOM05D006721 ORTHO05D000476 8.6e-31 137.1 112 64.3
Ca_09468_v3 Cicer arietinum L. HOM05D006721 ORTHO05D000476 1.5e-30 136.3 110 67.3
Zm00001eb301780 Zea mays HOM05D006721 ORTHO05D000476 1.9e-30 136.0 94 69.1
ATR0665G282 Amborella trichopoda HOM05D006721 ORTHO05D000476 7.3e-30 134.0 89 73.0
GSVIVG01014622001 Vitis vinifera HOM05D006721 ORTHO05D000476 9.5e-30 133.7 81 80.2
GSVIVG01015127001 Vitis vinifera HOM05D006721 ORTHO05D000476 3.6e-29 131.7 82 80.5
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 2.2e-26 122.5 105 61.9
Duzib128G0372 Durio zibethinus HOM05D006721 ORTHO05D000476 1.9e-25 119.4 113 60.2
SMO367G0192 Selaginella moellendorffii HOM05D001348 ORTHO05D002788 1.3e-23 113.2 102 57.8
Mapoly0013s0055 Marchantia polymorpha HOM05D006721 ORTHO05D000476 9.5e-22 107.1 105 52.4
BraA09t38027Z Brassica rapa HOM05D006721 ORTHO05D000476 3.1e-20 102.1 82 65.9
BraA10t43135Z Brassica rapa HOM05D006721 ORTHO05D000476 3.1e-20 102.1 82 65.9
A07p07050 Brassica napus HOM05D006721 ORTHO05D000476 4.0e-20 101.7 81 66.7
BraA06t26268Z Brassica rapa HOM05D006721 ORTHO05D000476 5.2e-20 101.3 83 67.5
arahy.Tifrunner.gnm1.ann1.DA1MAK Arachis hypogaea HOM05D006721 ORTHO05D000476 6.8e-20 100.9 85 60.0
arahy.Tifrunner.gnm1.ann1.P0L55B Arachis hypogaea HOM05D006721 ORTHO05D000476 6.8e-20 100.9 85 60.0
Pp3c7_11510 Physcomitrium patens HOM05D006721 ORTHO05D000476 2.0e-19 99.4 85 51.8
MELO3C004419.2 Cucumis melo HOM05D006721 ORTHO05D000476 9.8e-19 97.1 125 43.2
ClCG02G016980 Citrullus lanatus HOM05D006721 ORTHO05D000476 3.2e-17 92.0 115 45.2
C07p11900 Brassica napus HOM05D006721 ORTHO05D000476 1.2e-16 90.1 76 69.7
MCO10G233 Micromonas commoda HOM05D006721 ORTHO05D000476 4.6e-16 88.2 80 56.2
A09p24350 Brassica napus HOM05D006721 ORTHO05D000476 3.9e-15 85.1 58 70.7
BolC7t41661H Brassica oleracea HOM05D006721 ORTHO05D000476 8.6e-15 84.0 78 65.4
CBR_g51472 Chara braunii HOM05D006721 ORTHO05D000476 1.1e-14 83.6 87 46.0
A01p30750 Brassica napus HOM05D001035 ORTHO05D000476 1.9e-14 82.8 58 69.0
FAN09G4219 Fragaria x ananassa HOM05D006721 ORTHO05D000476 5.6e-14 81.3 78 53.8
BcaB06g29605 Brassica carinata HOM05D001035 ORTHO05D021752 2.1e-13 79.3 58 63.8
Rhsim09G0138600 Rhododendron simsii HOM05D006721 ORTHO05D000476 2.1e-13 79.3 68 58.8
PRCOL_00003504 Prasinoderma coloniale HOM05D006721 ORTHO05D000476 6.2e-13 77.8 76 53.9
Zm00001eb112450 Zea mays HOM05D006721 ORTHO05D000476 1.4e-12 76.6 49 67.3
Cre02.g105950 Chlamydomonas reinhardtii HOM05D006721 ORTHO05D000476 4.4e-11 71.6 85 44.7
DCAR_030976 Daucus carota HOM05D006721 ORTHO05D000476 3.7e-10 68.6 57 57.9
A05p09770 Brassica napus HOM05D006721 ORTHO05D000476 3.2e-09 65.5 49 67.3
SHI31376 Sapria himalayana HOM05D006721 ORTHO05D000476 7.8e-08 60.8 46 60.9
BolC5t30890H Brassica oleracea HOM05D000263 ORTHO05D028311 1.5e-06 56.6 41 63.4
C08p15110 Brassica napus HOM05D000263 ORTHO05D028311 1.9e-06 56.2 41 63.4
BolC8t49141H Brassica oleracea HOM05D000263 ORTHO05D028311 1.9e-06 56.2 41 63.4
BcaC06g35701 Brassica carinata HOM05D000809 ORTHO05D001196 7.3e-06 54.3 34 76.5


User provided reference genes

Program Settings