Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B02066 Eucalyptus grandis HOM05D007451 ORTHO05D009399 5.0e-94 347.8 182 100.0
Eucgr.E03355 Eucalyptus grandis HOM05D007451 ORTHO05D009399 2.9e-57 225.7 144 88.9
Eucgr.J01485 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.1e-56 223.8 130 90.8
Eucgr.I02284 Eucalyptus grandis HOM05D007451 ORTHO05D009399 5.9e-55 218.0 165 77.0
Eucgr.C02335 Eucalyptus grandis HOM05D007451 ORTHO05D009399 7.8e-39 164.5 85 98.8
Eucgr.H02213 Eucalyptus grandis HOM05D007451 ORTHO05D009399 3.3e-29 132.5 89 86.5
Nitab4.5_0003044g0100 Nicotiana tabacum HOM05D007451 ORTHO05D009399 8.1e-28 127.9 152 46.7
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 4.0e-27 125.6 174 43.1
Manes.17G070400 Manihot esculenta HOM05D007451 ORTHO05D009399 5.2e-27 125.2 153 48.4
TPR.G38261 Trifolium pratense HOM05D007451 ORTHO05D009399 6.9e-27 124.8 144 50.0
GSVIVG01021497001 Vitis vinifera HOM05D007451 ORTHO05D009399 6.9e-27 124.8 144 52.1
CSS0045800 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 1.5e-26 123.6 147 46.9
Potri.004G132600 Populus trichocarpa HOM05D007451 ORTHO05D009399 2.0e-26 123.2 153 49.0
Lj1C1189G10 Lonicera japonica HOM05D007451 ORTHO05D009399 5.8e-26 121.7 172 41.9
CiPaw.10G091600 Carya illinoinensis HOM05D007451 ORTHO05D009399 1.3e-25 120.6 139 51.1
Psat7g130000 Pisum sativum HOM05D007451 ORTHO05D009399 1.3e-25 120.6 144 49.3
Oeu031273.1 Olea europaea HOM05D007451 ORTHO05D009399 4.9e-25 118.6 144 46.5
Thhalv10017344m.g Eutrema salsugineum HOM05D007451 ORTHO05D009399 8.4e-25 117.9 144 45.8
CAN.G65.121 Capsicum annuum HOM05D007451 ORTHO05D009399 1.1e-24 117.5 170 44.1
TWI73G0492 Tripterygium wilfordii HOM05D007451 ORTHO05D009399 1.9e-24 116.7 136 50.7
Cc10_g10170 Coffea canephora HOM05D007451 ORTHO05D009399 2.4e-24 116.3 144 47.9
Medtr4g084470 Medicago truncatula HOM05D007451 ORTHO05D009399 4.2e-24 115.5 144 47.2
RcHm_v2.0_Chr5g0014241 Rosa chinensis HOM05D007451 ORTHO05D009399 5.4e-24 115.2 144 50.0
Sp4g16840 Schrenkiella parvula HOM05D007451 ORTHO05D009399 5.4e-24 115.2 144 45.8
AL4G30550 Arabidopsis lyrata HOM05D007451 ORTHO05D009399 7.1e-24 114.8 144 44.4
HanXRQChr04g0114281 Helianthus annuus HOM05D007451 ORTHO05D009399 1.2e-23 114.0 156 43.6
BcaC02g11529 Brassica carinata HOM05D007451 ORTHO05D009399 2.1e-23 113.2 144 45.1
Glyma.20G018400 Glycine max HOM05D007451 ORTHO05D009399 2.1e-23 113.2 156 45.5
BcaB02g09525 Brassica carinata HOM05D007451 ORTHO05D009399 2.7e-23 112.8 144 43.8
AT2G34580 Arabidopsis thaliana HOM05D007451 ORTHO05D009399 3.5e-23 112.5 144 44.4
Sc17g0004890 Simmondsia chinensis HOM05D007451 ORTHO05D009399 4.6e-23 112.1 144 45.1
Thecc.06G150100 Theobroma cacao HOM05D007451 ORTHO05D009399 1.0e-22 110.9 170 42.4
arahy.Tifrunner.gnm1.ann1.Z8IVUX Arachis hypogaea HOM05D007451 ORTHO05D009399 1.3e-22 110.5 144 45.8
arahy.Tifrunner.gnm1.ann1.ZU2BT9 Arachis hypogaea HOM05D007451 ORTHO05D009399 2.3e-22 109.8 144 45.8
CANSAT35G1195 Cannabis sativa HOM05D007451 ORTHO05D009399 3.0e-22 109.4 146 43.2
CARHR128670 Cardamine hirsuta HOM05D007451 ORTHO05D009399 3.9e-22 109.0 147 43.5
TAR624G0819 Trochodendron aralioides HOM05D007451 ORTHO05D009399 3.9e-22 109.0 157 42.7
Rhsim02G0158600 Rhododendron simsii HOM05D007451 ORTHO05D009399 6.6e-22 108.2 165 38.8
Sabra04G0085400 Salix brachista HOM05D007451 ORTHO05D009399 6.6e-22 108.2 170 41.8
Actinidia07699 Actinidia chinensis HOM05D007451 ORTHO05D009399 8.7e-22 107.8 137 46.0
Lsat_1_v5_gn_7_28421 Lactuca sativa HOM05D007451 ORTHO05D009399 1.9e-21 106.7 157 42.0
FAN21G0862 Fragaria x ananassa HOM05D007451 ORTHO05D009399 5.6e-21 105.1 163 44.8
VMungo0251G0908 Vigna mungo HOM05D007451 ORTHO05D009399 7.3e-21 104.8 142 45.8
Carub.0004s1625 Capsella rubella HOM05D007451 ORTHO05D009399 9.6e-21 104.4 149 41.6
Ciclev10018276m.g Citrus clementina HOM05D007451 ORTHO05D009399 9.6e-21 104.4 144 43.8
FAN11G0575 Fragaria x ananassa HOM05D007451 ORTHO05D009399 9.6e-21 104.4 152 46.1
Hma1.2p1_0286F.1_g114180 Hydrangea macrophylla HOM05D007451 ORTHO05D009399 1.6e-20 103.6 146 43.2
Phvul.002G096800 Phaseolus vulgaris HOM05D007451 ORTHO05D009399 1.1e-19 100.9 142 43.7
EL10Ac8g19670 Beta vulgaris HOM05D007451 ORTHO05D009399 2.4e-19 99.8 144 43.1
ECA246G3905 Erigeron canadensis HOM05D007451 ORTHO05D009399 2.4e-19 99.8 144 40.3
PSO541G4911 Papaver somniferum HOM05D007451 ORTHO05D009399 3.1e-19 99.4 144 41.0
PSO675G9053 Papaver somniferum HOM05D007451 ORTHO05D009399 3.1e-19 99.4 162 37.7
Nitab4.5_0003838g0080 Nicotiana tabacum HOM05D007451 ORTHO05D009399 5.3e-19 98.6 151 39.1
EL10Ac8g19669 Beta vulgaris HOM05D007451 ORTHO05D009399 9.0e-19 97.8 144 42.4
BraA05t20052Z Brassica rapa HOM05D007451 ORTHO05D009399 2.0e-18 96.7 172 35.5
MBI07_g23439_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 2.2e-17 93.2 144 40.3
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 3.8e-17 92.4 133 39.8
Dinv32247 Davidia involucrata HOM05D007451 ORTHO05D009399 1.9e-16 90.1 157 38.9
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 4.2e-16 89.0 119 40.3
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 5.4e-16 88.6 144 42.4
CSS0015635 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 9.3e-16 87.8 134 40.3
Aqoxy1G01697 Aquilegia oxysepala HOM05D007451 ORTHO05D009399 1.6e-15 87.0 139 43.9
QL05p057933 Quercus lobata HOM05D007451 ORTHO05D009399 2.7e-15 86.3 143 41.3
MD05G1283500 Malus domestica HOM05D007451 ORTHO05D009399 4.6e-15 85.5 144 39.6
Prupe.4G081100 Prunus persica HOM05D007451 ORTHO05D009399 4.6e-15 85.5 144 38.9
DCAR_003911 Daucus carota HOM05D007451 ORTHO05D009399 3.9e-14 82.4 111 45.9
Lalb_Chr16g0385141 Lupinus albus HOM05D007451 ORTHO05D009399 5.1e-14 82.0 144 38.9
Lj4g0011610 Lotus japonicus HOM05D007451 ORTHO05D009399 6.7e-14 81.6 96 43.8
Nn4g26566 Nelumbo nucifera HOM05D007451 ORTHO05D009399 6.7e-14 81.6 115 47.8
BolC4t27857H Brassica oleracea HOM05D007451 ORTHO05D009399 1.5e-13 80.5 99 47.5
Cfa000938 Carpinus fangiana HOM05D007451 ORTHO05D009399 1.9e-13 80.1 176 35.2
Gohir.A10G041200 Gossypium hirsutum HOM05D007451 ORTHO05D009399 2.1e-12 76.6 144 36.8
Gohir.D10G042000 Gossypium hirsutum HOM05D007451 ORTHO05D009399 2.1e-12 76.6 144 36.8
Gorai.011G044600 Gossypium raimondii HOM05D007451 ORTHO05D009399 2.1e-12 76.6 144 36.8
AUR62002741 Chenopodium quinoa HOM05D007451 ORTHO05D009399 2.8e-12 76.3 138 37.7
THA.LOC104814695 Tarenaya hassleriana HOM05D007451 ORTHO05D009399 2.8e-12 76.3 161 34.8
AUR62002733 Chenopodium quinoa HOM05D007451 ORTHO05D009399 1.4e-11 73.9 138 37.0
AUR62030193 Chenopodium quinoa HOM05D007451 ORTHO05D009399 1.4e-11 73.9 138 37.7
Glyma.07G220100 Glycine max HOM05D007451 ORTHO05D009399 1.8e-11 73.6 144 35.4
Gorai.008G053800 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.5e-10 70.5 130 37.7
Duzib192G0695 Durio zibethinus HOM05D007451 ORTHO05D009399 4.9e-09 65.5 144 35.4
arahy.Tifrunner.gnm1.ann1.WBAN0Y Arachis hypogaea HOM05D007451 ORTHO05D009399 6.4e-09 65.1 115 37.4
Gohir.D12G050550 Gossypium hirsutum HOM05D007451 ORTHO05D009399 6.4e-09 65.1 146 32.9
Gohir.D12G174800 Gossypium hirsutum HOM05D007451 ORTHO05D009399 8.4e-09 64.7 130 36.2
Gorai.004G185100 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.9e-08 63.5 146 32.9
FvH4_3g05500 Fragaria vesca HOM05D007451 ORTHO05D009399 3.2e-08 62.8 144 36.8
Zm00001eb204550 Zea mays HOM05D007451 ORTHO05D009399 5.5e-08 62.0 120 39.2
Peaxi162Scf00443g00210 Petunia axillaris HOM05D007451 ORTHO05D009399 9.3e-08 61.2 55 52.7
C04p14410 Brassica napus HOM05D007451 ORTHO05D009399 7.9e-07 58.2 121 32.2
vmacro10960 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 3.9e-06 55.8 122 32.8
C04p14350 Brassica napus HOM05D005261 ORTHO05D006180 8.7e-06 54.7 64 45.3
Haze_05609 Corylus avellana HOM05D007451 ORTHO05D009399 8.7e-06 54.7 60 45.0


User provided reference genes

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