Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B01993 Eucalyptus grandis HOM05D004239 ORTHO05D005191 1.4e-215 752.7 388 100.0
QL03p006503 Quercus lobata HOM05D004239 ORTHO05D005191 3.9e-173 611.7 386 79.5
Manes.08G122300 Manihot esculenta HOM05D004239 ORTHO05D005191 2.4e-170 602.4 386 79.5
CiPaw.07G016500 Carya illinoinensis HOM05D004239 ORTHO05D005191 5.3e-170 601.3 386 79.8
Cfa006576 Carpinus fangiana HOM05D004239 ORTHO05D005191 7.0e-170 600.9 386 79.0
Dinv40275 Davidia involucrata HOM05D004239 ORTHO05D005191 1.3e-168 596.7 386 77.7
Prupe.6G327600 Prunus persica HOM05D004239 ORTHO05D005191 1.7e-168 596.3 386 78.0
Cc00_g15600 Coffea canephora HOM05D004239 ORTHO05D005191 2.9e-168 595.5 386 76.9
FvH4_6g05650 Fragaria vesca HOM05D004239 ORTHO05D005191 2.9e-168 595.5 386 78.8
MD12G1220700 Malus domestica HOM05D004239 ORTHO05D005191 2.9e-168 595.5 386 77.5
GSVIVG01000037001 Vitis vinifera HOM05D004239 ORTHO05D005191 3.2e-167 592.0 381 79.3
Haze_04207 Corylus avellana HOM05D004239 ORTHO05D005191 2.1e-166 589.3 386 78.0
Potri.005G035300 Populus trichocarpa HOM05D004239 ORTHO05D005191 6.1e-166 587.8 386 78.0
Oeu027738.1 Olea europaea HOM05D004239 ORTHO05D005191 1.0e-165 587.0 386 75.1
CANSAT54G0620 Cannabis sativa HOM05D004239 ORTHO05D005191 1.8e-165 586.3 386 78.0
Actinidia23624 Actinidia chinensis HOM05D004239 ORTHO05D005191 3.9e-165 585.1 386 76.9
Cpa.g.sc48.35 Carica papaya HOM05D004239 ORTHO05D005191 5.2e-165 584.7 386 77.5
Manes.09G165700 Manihot esculenta HOM05D004239 ORTHO05D005191 4.4e-164 581.6 386 78.2
RcHm_v2.0_Chr3g0454501 Rosa chinensis HOM05D004239 ORTHO05D005191 4.4e-164 581.6 386 77.2
Nn4g26228 Nelumbo nucifera HOM05D004239 ORTHO05D005191 7.4e-164 580.9 390 76.2
Potri.013G024000 Populus trichocarpa HOM05D004239 ORTHO05D005191 7.4e-164 580.9 386 77.2
TAR636G0428 Trochodendron aralioides HOM05D004239 ORTHO05D005191 9.7e-164 580.5 387 77.0
Peaxi162Scf00037g00226 Petunia axillaris HOM05D004239 ORTHO05D005191 4.8e-163 578.2 386 75.6
Oeu038249.1 Olea europaea HOM05D004239 ORTHO05D005191 6.3e-163 577.8 386 75.1
MD04G1206900 Malus domestica HOM05D004239 ORTHO05D005191 1.8e-162 576.2 386 74.9
PGR083G1755 Punica granatum HOM05D004239 ORTHO05D005191 4.1e-162 575.1 384 76.8
SGA_v2.0_scaffold81G26082 Striga asiatica HOM05D004239 ORTHO05D005191 2.6e-161 572.4 385 73.5
Migut.N01997 Erythranthe guttata HOM05D004239 ORTHO05D005191 5.9e-161 571.2 386 73.8
vmacro23128 Vaccinium macrocarpon HOM05D004239 ORTHO05D005191 1.0e-160 570.5 384 74.0
Sed0007278 Sechium edule HOM05D004239 ORTHO05D005191 1.3e-160 570.1 387 74.7
Hund21687 Selenicereus undatus HOM05D004239 ORTHO05D005191 1.3e-160 570.1 387 76.2
EL10Ac4g09340 Beta vulgaris HOM05D004239 ORTHO05D005191 1.7e-160 569.7 385 75.6
Glyma.03G239000 Glycine max HOM05D004239 ORTHO05D005191 1.7e-160 569.7 386 74.6
PGSC0003DMG401028586 Solanum tuberosum HOM05D004239 ORTHO05D005191 3.8e-160 568.5 387 73.9
Lalb_Chr04g0260811 Lupinus albus HOM05D004239 ORTHO05D005191 6.5e-160 567.8 383 74.7
Nitab4.5_0005388g0060 Nicotiana tabacum HOM05D004239 ORTHO05D005191 6.5e-160 567.8 386 74.1
Nn1g02198 Nelumbo nucifera HOM05D004239 ORTHO05D005191 1.1e-159 567.0 389 74.3
Solyc01g098840.3 Solanum lycopersicum HOM05D004239 ORTHO05D005191 1.1e-159 567.0 387 73.6
MSTRG.5107 Avicennia marina HOM05D004239 ORTHO05D005191 1.9e-159 566.2 386 73.6
Sopen01g042380 Solanum pennellii HOM05D004239 ORTHO05D005191 1.9e-159 566.2 387 73.1
FAN14G2823 Fragaria x ananassa HOM05D004239 ORTHO05D005191 3.2e-159 565.5 386 75.9
Ciclev10001383m.g Citrus clementina HOM05D004239 ORTHO05D005191 7.2e-159 564.3 377 75.3
PSO063G4628 Papaver somniferum HOM05D004239 ORTHO05D005191 9.4e-159 563.9 389 74.3
Ca_09364_v3 Cicer arietinum L. HOM05D004239 ORTHO05D005191 1.2e-158 563.5 387 75.2
Sabra13G0025600 Salix brachista HOM05D004239 ORTHO05D005191 2.7e-158 562.4 404 72.8
FAN05G5256 Fragaria x ananassa HOM05D004239 ORTHO05D005191 4.7e-158 561.6 386 75.9
Rhsim05G0142700 Rhododendron simsii HOM05D004239 ORTHO05D005191 1.0e-157 560.5 387 74.2
TWI36G1635 Tripterygium wilfordii HOM05D004239 ORTHO05D005191 2.3e-157 559.3 389 74.6
vmacro19629 Vaccinium macrocarpon HOM05D004239 ORTHO05D005191 2.3e-157 559.3 387 73.4
CAN.G1077.21 Capsicum annuum HOM05D004239 ORTHO05D005191 5.2e-157 558.1 387 72.6
MELO3C004278.2 Cucumis melo HOM05D004239 ORTHO05D005191 8.8e-157 557.4 384 73.4
Phvul.006G092900 Phaseolus vulgaris HOM05D004239 ORTHO05D005191 1.5e-156 556.6 383 73.6
Nitab4.5_0009323g0010 Nicotiana tabacum HOM05D004239 ORTHO05D005191 2.0e-156 556.2 384 72.9
VMungo0540G1286 Vigna mungo HOM05D004239 ORTHO05D005191 2.0e-156 556.2 386 73.6
SalBow3G0110 Salvia bowleyana HOM05D004239 ORTHO05D005191 2.6e-156 555.8 385 71.9
Medtr7g113660 Medicago truncatula HOM05D004239 ORTHO05D005191 9.7e-156 553.9 387 74.2
Sed0006954 Sechium edule HOM05D004239 ORTHO05D005191 9.7e-156 553.9 383 72.6
CsaV3_2G005140 Cucumis sativus L. HOM05D004239 ORTHO05D005191 1.3e-155 553.5 384 72.9
TWI12G0310 Tripterygium wilfordii HOM05D004239 ORTHO05D005191 1.3e-155 553.5 388 73.7
AUR62005132 Chenopodium quinoa HOM05D004239 ORTHO05D005191 1.7e-155 553.1 384 74.2
FAN14G1612 Fragaria x ananassa HOM05D004239 ORTHO05D005191 3.1e-154 548.9 418 70.1
TPR.G33198 Trifolium pratense HOM05D004239 ORTHO05D005191 4.1e-154 548.5 391 73.9
Aqoxy2G03302 Aquilegia oxysepala HOM05D004239 ORTHO05D005191 9.1e-154 547.4 388 72.2
FAN02G3565 Fragaria x ananassa HOM05D004239 ORTHO05D005191 2.0e-153 546.2 418 70.1
Psat3g010600 Pisum sativum HOM05D004239 ORTHO05D005191 2.7e-153 545.8 387 72.9
Peaxi162Scf00471g00018 Petunia axillaris HOM05D004239 ORTHO05D005191 3.5e-153 545.4 384 71.9
ClCG02G015900 Citrullus lanatus HOM05D004239 ORTHO05D005191 4.5e-153 545.0 383 72.8
FAN05G0638 Fragaria x ananassa HOM05D004239 ORTHO05D005191 2.2e-152 542.7 418 69.9
CSS0041428 Camellia sinensis var. sinensis HOM05D004239 ORTHO05D005191 2.9e-152 542.3 386 73.1
FAN09G3705 Fragaria x ananassa HOM05D004239 ORTHO05D005191 3.8e-152 542.0 418 69.9
AUR62000841 Chenopodium quinoa HOM05D004239 ORTHO05D005191 6.5e-152 541.2 395 72.2
arahy.Tifrunner.gnm1.ann1.VWT09S Arachis hypogaea HOM05D004239 ORTHO05D005191 5.5e-151 538.1 388 72.7
unitig_0.g2376 Utricularia gibba HOM05D004239 ORTHO05D005191 2.7e-150 535.8 386 69.7
Lsat_1_v5_gn_4_139401 Lactuca sativa HOM05D004239 ORTHO05D005191 2.6e-148 529.3 386 71.0
DCAR_029425 Daucus carota HOM05D004239 ORTHO05D005191 7.5e-148 527.7 386 69.7
arahy.Tifrunner.gnm1.ann1.5NK7V3 Arachis hypogaea HOM05D004239 ORTHO05D005191 1.3e-147 526.9 412 68.7
Dinv23953 Davidia involucrata HOM05D004239 ORTHO05D005191 1.3e-147 526.9 350 75.7
Aa31LG11G9210 Aethionema arabicum HOM05D004239 ORTHO05D005191 8.3e-147 524.2 386 70.7
Duzib106G0174 Durio zibethinus HOM05D004239 ORTHO05D005191 1.1e-146 523.9 386 69.7
Lj9A25G19 Lonicera japonica HOM05D004239 ORTHO05D005191 1.1e-146 523.9 386 69.9
Lj9A26G17 Lonicera japonica HOM05D004239 ORTHO05D005191 1.1e-146 523.9 386 69.9
Thhalv10004396m.g Eutrema salsugineum HOM05D004239 ORTHO05D005191 3.8e-144 515.4 386 71.2
A09p05280 Brassica napus HOM05D004239 ORTHO05D005191 5.0e-144 515.0 386 69.7
BraA09t36167Z Brassica rapa HOM05D004239 ORTHO05D005191 6.6e-144 514.6 386 69.9
BcaB04g19671 Brassica carinata HOM05D004239 ORTHO05D005191 8.6e-144 514.2 388 70.6
A02p38630 Brassica napus HOM05D004239 ORTHO05D005191 1.5e-143 513.5 386 69.9
Lj1g0017751 Lotus japonicus HOM05D004239 ORTHO05D005191 1.5e-143 513.5 349 75.1
C09p05760 Brassica napus HOM05D004239 ORTHO05D005191 3.3e-143 512.3 386 70.2
BraA02t08839Z Brassica rapa HOM05D004239 ORTHO05D005191 3.3e-143 512.3 386 69.7
TAR365G0701 Trochodendron aralioides HOM05D004239 ORTHO05D005191 3.3e-143 512.3 348 76.1
BcaC04g23678 Brassica carinata HOM05D004239 ORTHO05D005191 2.8e-142 509.2 386 69.7
BolC9t53503H Brassica oleracea HOM05D004239 ORTHO05D005191 2.8e-142 509.2 386 69.7
Sp2g20670 Schrenkiella parvula HOM05D004239 ORTHO05D005191 4.7e-142 508.4 385 69.9
Thecc.05G305000 Theobroma cacao HOM05D004239 ORTHO05D005191 4.7e-142 508.4 388 67.8
Gohir.A11G295900 Gossypium hirsutum HOM05D004239 ORTHO05D005191 2.3e-141 506.1 386 67.9
HanXRQChr09g0259671 Helianthus annuus HOM05D004239 ORTHO05D005191 2.3e-141 506.1 385 67.5
BolC2t11880H Brassica oleracea HOM05D004239 ORTHO05D005191 4.0e-141 505.4 386 68.9
C02p58120 Brassica napus HOM05D004239 ORTHO05D005191 5.2e-141 505.0 386 69.2
THA.LOC104802807 Tarenaya hassleriana HOM05D004239 ORTHO05D005191 1.2e-140 503.8 385 70.6
ECA234G2741 Erigeron canadensis HOM05D004239 ORTHO05D005191 1.5e-140 503.4 389 68.1
Actinidia19795 Actinidia chinensis HOM05D004239 ORTHO05D005191 7.5e-140 501.1 341 75.1
Gorai.007G342800 Gossypium raimondii HOM05D004239 ORTHO05D005191 1.7e-139 500.0 386 67.4
Gohir.D11G311000 Gossypium hirsutum HOM05D004239 ORTHO05D005191 4.9e-139 498.4 386 67.4
Carub.0006s2508 Capsella rubella HOM05D004239 ORTHO05D005191 8.3e-139 497.7 386 69.4
AL6G39560 Arabidopsis lyrata HOM05D004239 ORTHO05D005191 3.1e-138 495.7 385 69.4
AT5G27450 Arabidopsis thaliana HOM05D004239 ORTHO05D005191 9.2e-138 494.2 385 69.1
Sc09g0003220 Simmondsia chinensis HOM05D004239 ORTHO05D005191 1.6e-137 493.4 348 73.6
CARHR186060 Cardamine hirsuta HOM05D004239 ORTHO05D005191 5.0e-136 488.4 386 68.4
Glyma.19G236200 Glycine max HOM05D004239 ORTHO05D005191 9.5e-135 484.2 335 72.5
ClCG10G005450 Citrullus lanatus HOM05D004239 ORTHO05D005191 8.9e-133 477.6 388 66.0
ATR0561G047 Amborella trichopoda HOM05D004239 ORTHO05D005191 3.0e-128 462.6 381 65.4
BcaC03g17788 Brassica carinata HOM05D004239 ORTHO05D005191 3.9e-128 462.2 386 65.3
Os10g0329300 Oryza sativa ssp. japonica HOM05D004239 ORTHO05D005191 7.5e-124 448.0 392 61.5
SEGI_00819 Sequoiadendron giganteum HOM05D004239 ORTHO05D005191 1.3e-123 447.2 388 60.1
Lsat_1_v5_gn_2_64361 Lactuca sativa HOM05D004239 ORTHO05D005191 2.4e-122 443.0 399 58.9
Sed0017775 Sechium edule HOM05D004239 ORTHO05D005191 3.2e-122 442.6 398 60.3
Zm00001eb209270 Zea mays HOM05D004239 ORTHO05D005191 4.6e-121 438.7 389 58.9
Nitab4.5_0002031g0070 Nicotiana tabacum HOM05D004239 ORTHO05D005191 2.5e-119 433.0 386 60.4
SHI18197 Sapria himalayana HOM05D004239 ORTHO05D005191 4.3e-119 432.2 397 57.4
Zm00001eb209470 Zea mays HOM05D004239 ORTHO05D005191 8.1e-118 427.9 377 59.7
Gorai.007G296000 Gossypium raimondii HOM05D004239 ORTHO05D005191 2.6e-116 422.9 385 60.5
Gohir.D11G274300 Gossypium hirsutum HOM05D004239 ORTHO05D005191 1.2e-108 397.5 385 58.4
CDE02G3721 Ceratophyllum demersum HOM05D004239 ORTHO05D005191 2.1e-105 386.7 295 64.7
MELO3C004281.2 Cucumis melo HOM05D004239 ORTHO05D005191 9.0e-101 371.3 271 69.7
Pp3c22_490 Physcomitrium patens HOM05D004239 ORTHO05D005191 1.6e-97 360.5 414 49.8
Mapoly0214s0007 Marchantia polymorpha HOM05D004239 ORTHO05D005191 6.0e-89 332.0 438 44.5
RcHm_v2.0_Chr7g0220931 Rosa chinensis HOM05D004239 ORTHO05D005191 2.5e-87 326.6 299 61.5
Actinidia05711 Actinidia chinensis HOM05D004239 ORTHO05D005191 5.6e-87 325.5 226 73.5
AagrBONN_evm.TU.Sc2ySwM_368.2263 Anthoceros agrestis HOM05D004239 ORTHO05D005191 4.8e-86 322.4 368 48.4
HPP92_020860 Vanilla planifolia HOM05D004239 ORTHO05D005191 2.2e-83 313.5 265 61.1
SMO347G0436 Selaginella moellendorffii HOM05D004239 ORTHO05D005191 1.8e-77 293.9 388 43.8
CBR_g3053 Chara braunii HOM05D004239 ORTHO05D005191 3.9e-64 249.6 463 36.1
CSS0049885 Camellia sinensis var. sinensis HOM05D004239 ORTHO05D005191 2.6e-60 236.9 168 72.0
Cfa007056 Carpinus fangiana HOM05D004239 ORTHO05D005191 1.8e-53 214.2 150 77.3
SMO167G0025 Selaginella moellendorffii HOM05D004239 ORTHO05D005191 1.8e-53 214.2 244 47.5
Nitab4.5_0000327g0030 Nicotiana tabacum HOM05D004239 ORTHO05D005191 7.7e-52 208.8 142 73.9
RcHm_v2.0_Chr3g0454481 Rosa chinensis HOM05D004239 ORTHO05D005191 2.9e-43 180.3 126 75.4
vmacro05023 Vaccinium macrocarpon HOM05D004239 ORTHO05D005191 3.2e-42 176.8 173 56.6
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 3.8e-35 153.3 401 30.7
RcHm_v2.0_Chr7g0220941 Rosa chinensis HOM05D004239 ORTHO05D005191 5.7e-31 139.4 87 81.6
Actinidia05710 Actinidia chinensis HOM05D004239 ORTHO05D005191 3.5e-28 130.2 77 83.1
Lj5A557G19 Lonicera japonica HOM05D004239 ORTHO05D005191 4.5e-28 129.8 149 54.4
Zm00001eb063950 Zea mays HOM05D004239 ORTHO05D005191 1.3e-27 128.3 166 44.0
COL.COLO4_16926 Corchorus olitorius HOM05D004239 ORTHO05D005191 8.6e-27 125.6 108 59.3
AagrBONN_evm.TU.Sc2ySwM_117.3520 Anthoceros agrestis HOM05D004239 ORTHO05D005191 5.5e-26 122.9 219 38.8
Lj5A557T20 Lonicera japonica HOM05D004239 ORTHO05D005191 4.7e-25 119.8 155 49.7
Lj5A556G14 Lonicera japonica HOM05D004239 ORTHO05D005191 5.7e-23 112.8 119 55.5
Lj5A555G9 Lonicera japonica HOM05D004239 ORTHO05D005191 7.5e-23 112.5 138 52.2
Lj5A558T15 Lonicera japonica HOM05D004239 ORTHO05D005191 3.2e-21 107.1 83 63.9
Lj5A552G14 Lonicera japonica HOM05D004239 ORTHO05D005191 7.3e-18 95.9 82 59.8
Lsat_1_v5_gn_7_76161 Lactuca sativa HOM05D004239 ORTHO05D005191 2.8e-17 94.0 99 52.5
Lj5A549T14 Lonicera japonica HOM05D004239 ORTHO05D005191 1.0e-16 92.0 127 49.6
Lj5A558T16 Lonicera japonica HOM05D004239 ORTHO05D005191 6.8e-16 89.4 127 48.8
Zm00001eb252600 Zea mays HOM05D004239 ORTHO05D005191 9.8e-15 85.5 106 46.2
Lj5A550T6 Lonicera japonica HOM05D004239 ORTHO05D005191 1.4e-13 81.6 123 46.3
COL.COLO4_16925 Corchorus olitorius HOM05D004239 ORTHO05D005191 3.5e-12 77.0 49 73.5
Zm00001eb313220 Zea mays HOM05D004239 ORTHO05D005191 7.8e-12 75.9 83 51.8
Potri.015G125201 Populus trichocarpa HOM05D004239 ORTHO05D005191 8.6e-11 72.4 53 64.2
CiPaw.07G016300 Carya illinoinensis HOM05D006625 ORTHO05D008060 1.9e-10 71.2 46 78.3
Zm00001eb193770 Zea mays HOM05D004239 ORTHO05D445176 7.3e-10 69.3 73 46.6
Oeu038248.1 Olea europaea HOM05D004239 ORTHO05D288322 3.6e-09 67.0 42 78.6
arahy.Tifrunner.gnm1.ann1.04YHM3 Arachis hypogaea HOM05D004239 ORTHO05D005191 5.2e-08 63.2 100 44.0
RcHm_v2.0_Chr3g0454471 Rosa chinensis HOM05D004239 ORTHO05D005191 1.5e-07 61.6 36 83.3
Zm00001eb406200 Zea mays HOM05D004239 ORTHO05D005191 7.5e-07 59.3 83 43.4
Zm00001eb342830 Zea mays HOM05D004239 ORTHO05D005191 2.2e-06 57.8 38 73.7
TPR.G33192 Trifolium pratense HOM05D004239 ORTHO05D410682 6.4e-06 56.2 80 50.0


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