Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B01971 Eucalyptus grandis HOM05D000001 ORTHO05D009286 6.0e-61 237.3 116 100.0
Eucgr.B01873 Eucalyptus grandis HOM05D000001 ORTHO05D009286 5.9e-48 194.1 100 95.0
Eucgr.B01968 Eucalyptus grandis HOM05D000001 ORTHO05D009286 1.9e-46 189.1 100 93.0
Actinidia23635 Actinidia chinensis HOM05D000001 ORTHO05D009286 7.7e-40 167.2 98 80.6
GSVIVG01000053001 Vitis vinifera HOM05D000001 ORTHO05D009286 7.7e-40 167.2 98 80.6
Potri.013G021000 Populus trichocarpa HOM05D000001 ORTHO05D009286 2.2e-39 165.6 98 80.6
Dinv40288 Davidia involucrata HOM05D000001 ORTHO05D009286 2.9e-39 165.2 98 80.6
arahy.Tifrunner.gnm1.ann1.N2G7N8 Arachis hypogaea HOM05D000001 ORTHO05D009286 3.8e-39 164.9 98 79.6
CSS0009057 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D009286 5.0e-39 164.5 97 80.4
Glyma.03G237900 Glycine max HOM05D000001 ORTHO05D009286 5.0e-39 164.5 98 79.6
Atru.chr2.405 Acer truncatum HOM05D000001 ORTHO05D009286 6.5e-39 164.1 98 80.6
Lj1g0025628 Lotus japonicus HOM05D000001 ORTHO05D009286 6.5e-39 164.1 98 79.6
arahy.Tifrunner.gnm1.ann1.LJ09F6 Arachis hypogaea HOM05D000001 ORTHO05D009286 1.1e-38 163.3 98 78.6
Lsat_1_v5_gn_9_123500 Lactuca sativa HOM05D000001 ORTHO05D009286 1.9e-38 162.5 100 78.0
Nitab4.5_0003156g0050 Nicotiana tabacum HOM05D000001 ORTHO05D009286 1.9e-38 162.5 98 80.6
Sopen01g042810 Solanum pennellii HOM05D000001 ORTHO05D009286 4.2e-38 161.4 100 77.0
PGSC0003DMG400024697 Solanum tuberosum HOM05D000001 ORTHO05D009286 4.2e-38 161.4 100 77.0
Manes.09G167201 Manihot esculenta HOM05D000001 ORTHO05D009286 9.4e-38 160.2 100 76.0
CAN.G1034.26 Capsicum annuum HOM05D000001 ORTHO05D009286 1.2e-37 159.8 100 76.0
Gohir.A11G265100 Gossypium hirsutum HOM05D000001 ORTHO05D009286 1.2e-37 159.8 100 77.0
Gohir.D11G275300 Gossypium hirsutum HOM05D000001 ORTHO05D009286 1.2e-37 159.8 100 77.0
Gorai.007G297100 Gossypium raimondii HOM05D000001 ORTHO05D009286 1.2e-37 159.8 100 77.0
Lalb_Chr18g0045641 Lupinus albus HOM05D000001 ORTHO05D009286 1.2e-37 159.8 98 76.5
RcHm_v2.0_Chr3g0454761 Rosa chinensis HOM05D000001 ORTHO05D009286 1.2e-37 159.8 98 79.6
TAR362G0463 Trochodendron aralioides HOM05D000001 ORTHO05D009286 1.2e-37 159.8 100 78.0
RhsimUnG0226000 Rhododendron simsii HOM05D000001 ORTHO05D009286 1.6e-37 159.5 98 76.5
EL10Ac6g14022 Beta vulgaris HOM05D000001 ORTHO05D009286 2.1e-37 159.1 100 79.0
Medtr7g113530 Medicago truncatula HOM05D000001 ORTHO05D009286 2.1e-37 159.1 98 78.6
VMungo0540G1561 Vigna mungo HOM05D000001 ORTHO05D009286 3.6e-37 158.3 97 78.4
Ca_09356_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009286 4.7e-37 157.9 100 76.0
Solyc01g099260.3 Solanum lycopersicum HOM05D000001 ORTHO05D009286 4.7e-37 157.9 100 76.0
Hund07071 Selenicereus undatus HOM05D000001 ORTHO05D009286 6.1e-37 157.5 100 79.0
Thecc.05G303100 Theobroma cacao HOM05D000001 ORTHO05D009286 6.1e-37 157.5 100 77.0
Nitab4.5_0000137g0060 Nicotiana tabacum HOM05D000001 ORTHO05D009286 1.0e-36 156.8 98 76.5
HanXRQChr03g0071681 Helianthus annuus HOM05D000001 ORTHO05D009286 1.4e-36 156.4 100 74.0
Prupe.6G325800 Prunus persica HOM05D000001 ORTHO05D009286 1.4e-36 156.4 98 79.6
CiPaw.07G017900 Carya illinoinensis HOM05D000001 ORTHO05D009286 1.8e-36 156.0 100 76.0
MELO3C004256.2 Cucumis melo HOM05D000001 ORTHO05D009286 1.8e-36 156.0 96 77.1
Duzib177G1137 Durio zibethinus HOM05D000001 ORTHO05D009582 1.8e-36 156.0 100 76.0
Ciclev10002196m.g Citrus clementina HOM05D000001 ORTHO05D009286 2.3e-36 155.6 100 73.0
MD12G1219200 Malus domestica HOM05D000001 ORTHO05D009286 2.3e-36 155.6 98 78.6
Phvul.006G091900 Phaseolus vulgaris HOM05D000001 ORTHO05D009286 2.3e-36 155.6 100 74.0
ECA240G0839 Erigeron canadensis HOM05D000001 ORTHO05D009286 3.0e-36 155.2 100 73.0
Haze_04195 Corylus avellana HOM05D000001 ORTHO05D009582 3.9e-36 154.8 98 76.5
QL03p007002 Quercus lobata HOM05D000001 ORTHO05D009286 3.9e-36 154.8 100 75.0
vmacro05020 Vaccinium macrocarpon HOM05D000001 ORTHO05D009286 3.9e-36 154.8 96 77.1
CsaV3_2G005310 Cucumis sativus L. HOM05D000001 ORTHO05D009286 8.8e-36 153.7 96 76.0
CANSAT78G1766 Cannabis sativa HOM05D000001 ORTHO05D009286 1.1e-35 153.3 98 78.6
Cc02_g33430 Coffea canephora HOM05D000001 ORTHO05D009286 1.1e-35 153.3 100 76.0
ClCG02G015790 Citrullus lanatus HOM05D000001 ORTHO05D009286 1.5e-35 152.9 96 76.0
Peaxi162Scf00037g00631 Petunia axillaris HOM05D000001 ORTHO05D009286 1.5e-35 152.9 100 75.0
Sed0027835 Sechium edule HOM05D000001 ORTHO05D009286 1.5e-35 152.9 96 74.0
TWI12G0446 Tripterygium wilfordii HOM05D000001 ORTHO05D009286 1.5e-35 152.9 101 76.2
TPR.G18990 Trifolium pratense HOM05D000001 ORTHO05D009286 2.0e-35 152.5 98 76.5
FAN06G3148 Fragaria x ananassa HOM05D000001 ORTHO05D009286 2.6e-35 152.1 98 75.5
CANSAT78G0322 Cannabis sativa HOM05D000001 ORTHO05D009286 3.3e-35 151.8 98 77.6
Oeu017485.1 Olea europaea HOM05D000001 ORTHO05D009286 3.3e-35 151.8 88 81.8
Nn1g02236 Nelumbo nucifera HOM05D000001 ORTHO05D009286 5.7e-35 151.0 100 73.0
FvH4_7g03590 Fragaria vesca HOM05D000001 ORTHO05D009286 7.4e-35 150.6 98 74.5
PGR083G0578 Punica granatum HOM05D000001 ORTHO05D009286 7.4e-35 150.6 80 86.2
SalBow8G4411 Salvia bowleyana HOM05D000001 ORTHO05D009286 1.7e-34 149.4 98 72.4
AUR62014152 Chenopodium quinoa HOM05D000001 ORTHO05D009286 2.2e-34 149.1 102 74.5
Sc06g0003290 Simmondsia chinensis HOM05D000001 ORTHO05D009286 2.8e-34 148.7 100 75.0
Psat3g010960 Pisum sativum HOM05D000001 ORTHO05D009286 4.8e-34 147.9 98 74.5
DCAR_024833 Daucus carota HOM05D000001 ORTHO05D009286 4.1e-33 144.8 98 71.4
COL.COLO4_13469 Corchorus olitorius HOM05D000001 ORTHO05D009286 1.5e-32 142.9 85 80.0
MSTRG.16965 Avicennia marina HOM05D000001 ORTHO05D009286 4.5e-32 141.4 96 71.9
Migut.B01034 Erythranthe guttata HOM05D000001 ORTHO05D009286 2.2e-31 139.0 89 74.2
Carub.0003s0462 Capsella rubella HOM05D000001 ORTHO05D009286 2.9e-31 138.7 101 69.3
Aqoxy2G03342 Aquilegia oxysepala HOM05D000001 ORTHO05D009286 3.8e-31 138.3 92 71.7
AT3G05345 Arabidopsis thaliana HOM05D000001 ORTHO05D009286 1.1e-30 136.7 101 69.3
BNapus_Darmor_BZH_scaffold_114p00160 Brassica napus HOM05D000001 ORTHO05D009286 1.5e-30 136.3 101 69.3
BraSC132t45509Z Brassica rapa HOM05D000001 ORTHO05D009286 1.5e-30 136.3 101 69.3
Sabra13G0023400 Salix brachista HOM05D000001 ORTHO05D009286 1.5e-30 136.3 78 82.1
Sp3g04210 Schrenkiella parvula HOM05D000001 ORTHO05D009286 1.9e-30 136.0 101 68.3
CARHR079690 Cardamine hirsuta HOM05D000001 ORTHO05D009286 5.5e-30 134.4 101 68.3
THA.LOC104821713 Tarenaya hassleriana HOM05D000001 ORTHO05D009286 7.2e-30 134.0 102 69.6
BcaC05g30155 Brassica carinata HOM05D000001 ORTHO05D009286 1.2e-29 133.3 101 67.3
AL3G15790 Arabidopsis lyrata HOM05D000001 ORTHO05D009286 4.7e-29 131.3 101 66.3
FAN03G0753 Fragaria x ananassa HOM05D000001 ORTHO05D009286 1.0e-28 130.2 79 75.9
MBI17_g31750_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009286 1.0e-28 130.2 100 66.0
ATR0030G028 Amborella trichopoda HOM05D000001 ORTHO05D009286 3.9e-28 128.3 100 65.0
SGA_v2.0_scaffold172G38993 Striga asiatica HOM05D000001 ORTHO05D009286 1.1e-27 126.7 100 65.0
PSO302G0274 Papaver somniferum HOM05D000001 ORTHO05D009286 3.3e-27 125.2 93 65.6
unitig_747.g21349 Utricularia gibba HOM05D000001 ORTHO05D009286 5.7e-27 124.4 94 62.8
PSO170G4485 Papaver somniferum HOM05D000001 ORTHO05D009286 7.4e-27 124.0 93 66.7
Aa31LG5G15720 Aethionema arabicum HOM05D000141 ORTHO05D001311 2.2e-26 122.5 85 70.6
Lj9C80T2 Lonicera japonica HOM05D000001 ORTHO05D009286 4.8e-26 121.3 99 65.7
CDE05G2030 Ceratophyllum demersum HOM05D000001 ORTHO05D009286 2.6e-24 115.5 103 58.3
Zm00001eb287490 Zea mays HOM05D000001 ORTHO05D009286 3.5e-24 115.2 100 59.0
HPP92_013683 Vanilla planifolia HOM05D000001 ORTHO05D009286 5.9e-24 114.4 100 55.0
AagrBONN_evm.TU.Sc2ySwM_344.2674 Anthoceros agrestis HOM05D000001 ORTHO05D009286 6.3e-18 94.4 96 52.1
Mapoly0074s0078 Marchantia polymorpha HOM05D000001 ORTHO05D009286 1.2e-16 90.1 96 50.0
AUR62038496 Chenopodium quinoa HOM05D000001 ORTHO05D009286 5.9e-16 87.8 59 76.3
Cfa006590 Carpinus fangiana HOM05D000001 ORTHO05D009582 7.7e-16 87.4 55 76.4
Pp3c27_1510 Physcomitrium patens HOM05D000001 ORTHO05D009286 7.2e-14 80.9 97 45.4
SMO367G0812 Selaginella moellendorffii HOM05D000001 ORTHO05D009286 3.6e-13 78.6 95 44.2
CBR_g31147 Chara braunii HOM05D000001 ORTHO05D009286 4.4e-11 71.6 99 44.4
Lsat_1_v5_gn_5_155340 Lactuca sativa HOM05D001365 ORTHO05D009286 1.9e-06 56.2 41 63.4
MCO07G492 Micromonas commoda HOM05D000001 ORTHO05D009286 4.2e-06 55.1 75 38.7


User provided reference genes

Program Settings