Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B01970 Eucalyptus grandis HOM05D006315 ORTHO05D008052 1.2e-103 379.8 188 100.0
Eucgr.B01969 Eucalyptus grandis HOM05D006315 ORTHO05D008052 1.6e-82 309.7 187 84.0
TAR381G0108 Trochodendron aralioides HOM05D006315 ORTHO05D008052 1.2e-74 283.5 187 73.3
GSVIVG01000051001 Vitis vinifera HOM05D006315 ORTHO05D008052 2.9e-73 278.9 187 73.3
QL03p006996 Quercus lobata HOM05D006315 ORTHO05D008052 8.5e-73 277.3 186 72.6
Actinidia05703 Actinidia chinensis HOM05D006315 ORTHO05D008052 1.1e-72 276.9 187 71.7
RhsimUnG0225800 Rhododendron simsii HOM05D006315 ORTHO05D008052 1.1e-72 276.9 187 72.2
vmacro05019 Vaccinium macrocarpon HOM05D006315 ORTHO05D008052 1.5e-72 276.6 187 72.2
Dinv40287 Davidia involucrata HOM05D006315 ORTHO05D008052 4.7e-71 271.6 187 70.6
Aqoxy6G00442 Aquilegia oxysepala HOM05D006315 ORTHO05D008052 6.1e-71 271.2 187 70.1
Ciclev10001688m.g Citrus clementina HOM05D006315 ORTHO05D008052 6.1e-71 271.2 187 71.1
Manes.09G167100 Manihot esculenta HOM05D006315 ORTHO05D008052 8.0e-71 270.8 187 71.1
MBI01_g44539_MAGBIO Magnolia biondii HOM05D006315 ORTHO05D008052 1.0e-70 270.4 189 70.4
Nn6g32180 Nelumbo nucifera HOM05D006315 ORTHO05D008052 1.0e-70 270.4 187 70.1
PGR083G2010 Punica granatum HOM05D006315 ORTHO05D008052 1.0e-70 270.4 187 72.7
Cpa.g.sc48.53 Carica papaya HOM05D006315 ORTHO05D008052 1.8e-70 269.6 187 70.1
Cfa006589 Carpinus fangiana HOM05D006315 ORTHO05D008052 1.8e-70 269.6 187 70.6
Prupe.6G325900 Prunus persica HOM05D006315 ORTHO05D008052 1.8e-70 269.6 187 69.5
CiPaw.07G017800 Carya illinoinensis HOM05D006315 ORTHO05D008052 2.3e-70 269.2 187 70.6
CSS0039769 Camellia sinensis var. sinensis HOM05D006315 ORTHO05D008052 4.0e-70 268.5 187 69.5
COL.COLO4_13471 Corchorus olitorius HOM05D006315 ORTHO05D008052 2.6e-69 265.8 187 69.5
PSO675G8687 Papaver somniferum HOM05D006315 ORTHO05D008052 4.4e-69 265.0 191 67.5
ATR1120G073 Amborella trichopoda HOM05D006315 ORTHO05D008052 7.5e-69 264.2 187 67.9
Duzib128G1131 Durio zibethinus HOM05D006315 ORTHO05D008052 9.8e-69 263.8 187 68.4
Lsat_1_v5_gn_9_86000 Lactuca sativa HOM05D006315 ORTHO05D008052 9.8e-69 263.8 187 69.0
PGSC0003DMG400018995 Solanum tuberosum HOM05D006315 ORTHO05D008052 9.8e-69 263.8 187 68.4
THA.LOC104818698 Tarenaya hassleriana HOM05D006315 ORTHO05D008052 1.3e-68 263.5 187 70.6
AL6G39450 Arabidopsis lyrata HOM05D006315 ORTHO05D008052 1.7e-68 263.1 182 70.3
Gohir.A11G265000 Gossypium hirsutum HOM05D006315 ORTHO05D008052 1.7e-68 263.1 187 69.0
RcHm_v2.0_Chr3g0454751 Rosa chinensis HOM05D006315 ORTHO05D008052 1.7e-68 263.1 187 65.8
Cc02_g33440 Coffea canephora HOM05D006315 ORTHO05D008052 2.2e-68 262.7 187 69.5
Sp2g20750 Schrenkiella parvula HOM05D006315 ORTHO05D008052 3.7e-68 261.9 184 69.0
ECA236G1566 Erigeron canadensis HOM05D006315 ORTHO05D008052 4.8e-68 261.5 187 66.3
FvH4_6g05840 Fragaria vesca HOM05D006315 ORTHO05D008052 4.8e-68 261.5 187 65.8
FAN02G1008 Fragaria x ananassa HOM05D006315 ORTHO05D008052 4.8e-68 261.5 187 65.8
FAN14G1304 Fragaria x ananassa HOM05D006315 ORTHO05D008052 4.8e-68 261.5 187 65.8
FAN14G3373 Fragaria x ananassa HOM05D006315 ORTHO05D008052 4.8e-68 261.5 187 65.8
Gohir.D11G275200 Gossypium hirsutum HOM05D006315 ORTHO05D008052 4.8e-68 261.5 187 68.4
Gorai.007G297000 Gossypium raimondii HOM05D006315 ORTHO05D008052 4.8e-68 261.5 187 68.4
FAN05G4943 Fragaria x ananassa HOM05D006315 ORTHO05D008052 8.3e-68 260.8 187 65.8
Solyc01g098990.4 Solanum lycopersicum HOM05D006315 ORTHO05D008052 8.3e-68 260.8 187 67.9
Sopen01g042560 Solanum pennellii HOM05D006315 ORTHO05D008052 8.3e-68 260.8 187 67.9
Carub.0006s2500 Capsella rubella HOM05D006315 ORTHO05D008052 1.1e-67 260.4 183 69.9
CARHR186120 Cardamine hirsuta HOM05D006315 ORTHO05D008052 1.1e-67 260.4 182 69.8
Aa31LG11G9300 Aethionema arabicum HOM05D006315 ORTHO05D008052 1.4e-67 260.0 184 68.5
Thhalv10004542m.g Eutrema salsugineum HOM05D006315 ORTHO05D008052 1.4e-67 260.0 184 67.9
FAN09G2245 Fragaria x ananassa HOM05D006315 ORTHO05D008052 1.4e-67 260.0 187 65.2
Potri.013G020800 Populus trichocarpa HOM05D006315 ORTHO05D008052 1.4e-67 260.0 187 67.9
AT5G27560 Arabidopsis thaliana HOM05D006315 ORTHO05D008052 3.1e-67 258.8 179 70.4
Oeu020852.1 Olea europaea HOM05D006315 ORTHO05D008052 3.1e-67 258.8 187 68.4
A09p05350 Brassica napus HOM05D006315 ORTHO05D008052 5.4e-67 258.1 184 67.9
C09p05830 Brassica napus HOM05D006315 ORTHO05D008052 5.4e-67 258.1 184 67.9
BolC9t53510H Brassica oleracea HOM05D006315 ORTHO05D008052 5.4e-67 258.1 184 67.9
BraA09t36173Z Brassica rapa HOM05D006315 ORTHO05D008052 5.4e-67 258.1 184 67.9
MD12G1219300 Malus domestica HOM05D006315 ORTHO05D008052 5.4e-67 258.1 187 66.3
Peaxi162Scf00037g00325 Petunia axillaris HOM05D006315 ORTHO05D008052 5.4e-67 258.1 187 67.4
Thecc.05G303200 Theobroma cacao HOM05D006315 ORTHO05D008052 5.4e-67 258.1 187 66.3
CAN.G1034.11 Capsicum annuum HOM05D006315 ORTHO05D008052 7.0e-67 257.7 187 67.9
HanXRQChr02g0046151 Helianthus annuus HOM05D006315 ORTHO05D008052 7.0e-67 257.7 187 64.7
Sabra13G0023200 Salix brachista HOM05D006315 ORTHO05D008052 2.7e-66 255.8 187 65.2
TWI36G1375 Tripterygium wilfordii HOM05D006315 ORTHO05D008052 2.7e-66 255.8 187 66.3
AUR62000828 Chenopodium quinoa HOM05D006315 ORTHO05D008052 3.5e-66 255.4 187 65.2
SalBow8G0023 Salvia bowleyana HOM05D006315 ORTHO05D008052 4.5e-66 255.0 191 68.1
FAN05G5779 Fragaria x ananassa HOM05D006315 ORTHO05D008052 5.9e-66 254.6 207 60.4
Sc06g0003310 Simmondsia chinensis HOM05D006315 ORTHO05D008052 5.9e-66 254.6 187 67.9
AUR62005146 Chenopodium quinoa HOM05D006315 ORTHO05D008052 1.3e-65 253.4 187 64.7
Nitab4.5_0004395g0040 Nicotiana tabacum HOM05D006315 ORTHO05D008052 3.8e-65 251.9 187 66.3
Hund07070 Selenicereus undatus HOM05D006315 ORTHO05D008052 1.2e-63 246.9 183 66.1
Lalb_Chr02g0148251 Lupinus albus HOM05D006315 ORTHO05D008052 2.1e-63 246.1 184 65.2
ClCG02G015800 Citrullus lanatus HOM05D006315 ORTHO05D008052 2.8e-63 245.7 187 66.3
CDE06G2073 Ceratophyllum demersum HOM05D006315 ORTHO05D008052 3.6e-63 245.4 189 62.4
Sed0013855 Sechium edule HOM05D006315 ORTHO05D008052 8.0e-63 244.2 189 65.1
MSTRG.16964 Avicennia marina HOM05D006315 ORTHO05D008052 1.4e-62 243.4 187 66.3
DCAR_022164 Daucus carota HOM05D006315 ORTHO05D008052 1.4e-62 243.4 186 63.4
Ah.06g189370 Amaranthus hybridus HOM05D006315 ORTHO05D008052 4.0e-62 241.9 178 65.7
CsaV3_2G005300 Cucumis sativus L. HOM05D006315 ORTHO05D008052 5.2e-62 241.5 194 64.4
PSO541G4223 Papaver somniferum HOM05D006315 ORTHO05D008052 2.6e-61 239.2 171 67.3
Migut.B01035 Erythranthe guttata HOM05D006315 ORTHO05D008052 3.4e-61 238.8 187 64.7
unitig_37.g12631 Utricularia gibba HOM05D006315 ORTHO05D008052 3.4e-61 238.8 187 64.2
VMungo0720G2927 Vigna mungo HOM05D006315 ORTHO05D008052 4.4e-61 238.4 184 62.5
Phvul.007G180000 Phaseolus vulgaris HOM05D006315 ORTHO05D008052 5.7e-61 238.0 184 62.5
arahy.Tifrunner.gnm1.ann1.9IE074 Arachis hypogaea HOM05D006315 ORTHO05D008052 2.4e-59 232.6 184 62.5
Ca_10111_v3 Cicer arietinum L. HOM05D006315 ORTHO05D008052 4.1e-59 231.9 183 61.2
Lj5g0002172 Lotus japonicus HOM05D006315 ORTHO05D008052 4.1e-59 231.9 191 58.1
TPR.G6112 Trifolium pratense HOM05D006315 ORTHO05D008052 5.4e-59 231.5 185 60.0
Glyma.20G234000 Glycine max HOM05D006315 ORTHO05D008052 2.0e-58 229.6 185 60.5
Medtr1g082900 Medicago truncatula HOM05D006315 ORTHO05D008052 2.7e-58 229.2 183 61.7
Nitab4.5_0000137g0320 Nicotiana tabacum HOM05D006315 ORTHO05D008052 5.9e-58 228.0 173 64.2
Glyma.10G154300 Glycine max HOM05D006315 ORTHO05D008052 7.8e-58 227.6 185 59.5
Eucgr.B01875 Eucalyptus grandis HOM05D006315 ORTHO05D008052 1.0e-57 227.3 144 80.6
Psat6g151200 Pisum sativum HOM05D006315 ORTHO05D008052 1.0e-57 227.3 185 59.5
Atru.chr2.406 Acer truncatum HOM05D006315 ORTHO05D008052 1.3e-52 210.3 167 61.7
MELO3C004257.2 Cucumis melo HOM05D006315 ORTHO05D008052 1.1e-51 207.2 153 66.7
SEGI_29864 Sequoiadendron giganteum HOM05D006315 ORTHO05D008052 2.4e-51 206.1 191 55.5
SGA_v2.0_scaffold13G06358 Striga asiatica HOM05D006315 ORTHO05D008052 5.4e-51 204.9 151 65.6
Haze_04196 Corylus avellana HOM05D006315 ORTHO05D008052 6.4e-44 181.4 187 54.0
AagrBONN_evm.TU.Sc2ySwM_368.1535 Anthoceros agrestis HOM05D006315 ORTHO05D008052 5.0e-41 171.8 189 47.1
SMO116G0320 Selaginella moellendorffii HOM05D006315 ORTHO05D008052 5.6e-40 168.3 192 44.8
Mapoly0046s0092 Marchantia polymorpha HOM05D006315 ORTHO05D008052 3.1e-38 162.5 196 44.4
EL10Ac4g09351 Beta vulgaris HOM05D006315 ORTHO05D008052 1.2e-37 160.6 158 55.1
Zm00001eb377150 Zea mays HOM05D006315 ORTHO05D008052 2.2e-36 156.4 181 47.0
Pp3c1_23410 Physcomitrium patens HOM05D006315 ORTHO05D008052 2.4e-35 152.9 192 41.7
arahy.Tifrunner.gnm1.ann1.SMKB8G Arachis hypogaea HOM05D006315 ORTHO05D008052 5.6e-32 141.7 159 50.3
Lj5A533G15 Lonicera japonica HOM05D006315 ORTHO05D008052 1.6e-26 123.6 68 82.4
Lj5P531T4 Lonicera japonica HOM05D006315 ORTHO05D008052 7.8e-26 121.3 83 69.9
Actinidia23634 Actinidia chinensis HOM05D006315 ORTHO05D008052 8.1e-23 111.3 65 83.1
HPP92_002820 Vanilla planifolia HOM05D006315 ORTHO05D008052 4.0e-22 109.0 72 69.4
HPP92_002878 Vanilla planifolia HOM05D006315 ORTHO05D008052 5.2e-22 108.6 72 69.4
Cre17.g739550 Chlamydomonas reinhardtii HOM05D006315 ORTHO05D008052 1.2e-21 107.5 205 32.2
Lj5C470G0 Lonicera japonica HOM05D006315 ORTHO05D008052 3.4e-21 105.9 59 79.7
Lj5C532G5 Lonicera japonica HOM05D006315 ORTHO05D008052 3.4e-21 105.9 59 79.7
MCO15G525 Micromonas commoda HOM05D006315 ORTHO05D008052 1.6e-18 97.1 172 32.0
PRCOL_00006277 Prasinoderma coloniale HOM05D006315 ORTHO05D008052 8.7e-17 91.3 159 34.0
arahy.Tifrunner.gnm1.ann1.T3AGRQ Arachis hypogaea HOM05D006315 ORTHO05D008052 2.5e-16 89.7 55 72.7
Lj5A532G12 Lonicera japonica HOM05D006315 ORTHO05D008052 6.2e-15 85.1 128 42.2
EL10As4g23462 Beta vulgaris HOM05D006315 ORTHO05D008052 1.8e-14 83.6 76 59.2
Lj5A470G9 Lonicera japonica HOM05D006315 ORTHO05D008052 4.0e-14 82.4 123 41.5
Lj5A532G11 Lonicera japonica HOM05D006315 ORTHO05D008052 1.3e-12 77.4 123 39.8
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 1.3e-09 67.4 42 76.2
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 1.3e-09 67.4 42 76.2
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 7.4e-08 61.6 37 75.7
HPP92_002889 Vanilla planifolia HOM05D006315 ORTHO05D008052 6.2e-07 58.5 51 52.9


User provided reference genes

Program Settings