Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 7.1e-209 730.3 365 100.0
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 1.4e-127 460.3 364 67.6
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 5.8e-126 454.9 364 67.0
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 2.9e-125 452.6 362 66.6
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 8.4e-125 451.1 364 65.9
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 2.1e-123 446.4 366 63.9
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 6.0e-123 444.9 364 66.2
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 1.7e-122 443.4 362 65.7
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 6.6e-122 441.4 322 70.5
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 4.3e-121 438.7 366 64.2
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 4.3e-121 438.7 363 63.9
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 8.1e-120 434.5 364 63.5
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 8.1e-120 434.5 372 61.8
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 8.1e-120 434.5 377 61.8
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 2.4e-119 433.0 370 62.7
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 3.1e-119 432.6 372 61.6
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 6.9e-119 431.4 360 65.0
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 9.0e-119 431.0 365 61.9
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 9.0e-119 431.0 367 62.7
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 2.6e-118 429.5 360 65.3
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 3.4e-118 429.1 367 63.8
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 9.9e-118 427.6 355 64.8
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 2.9e-117 426.0 366 62.6
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 1.9e-116 423.3 366 60.9
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 3.2e-116 422.5 361 64.5
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 5.4e-116 421.8 370 63.5
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 7.1e-116 421.4 328 65.5
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 1.6e-115 420.2 364 61.0
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 1.6e-115 420.2 357 61.9
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 2.1e-115 419.9 360 62.5
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 3.5e-115 419.1 359 60.2
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 3.5e-115 419.1 357 62.2
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 3.5e-115 419.1 359 63.8
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 6.0e-115 418.3 363 60.9
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 6.0e-115 418.3 370 61.1
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 7.9e-115 417.9 361 62.6
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 3.0e-114 416.0 367 62.4
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 6.6e-114 414.8 370 60.8
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 1.5e-113 413.7 355 60.8
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.5e-113 413.7 337 66.5
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 2.5e-113 412.9 381 60.4
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 2.5e-113 412.9 354 63.3
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 3.3e-113 412.5 357 61.3
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 7.3e-113 411.4 363 60.6
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 9.6e-113 411.0 321 64.5
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 1.6e-112 410.2 363 60.1
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 2.1e-112 409.8 367 61.0
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 2.8e-112 409.5 361 60.1
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 2.8e-112 409.5 353 62.6
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 3.6e-112 409.1 360 60.3
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 6.2e-112 408.3 359 61.3
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 6.2e-112 408.3 338 62.7
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 6.2e-112 408.3 368 59.8
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 8.1e-112 407.9 361 59.8
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 8.1e-112 407.9 361 59.6
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 1.1e-111 407.5 318 66.0
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 1.4e-111 407.1 361 59.3
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 4.0e-111 405.6 315 64.4
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 1.5e-110 403.7 354 59.6
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 2.6e-110 402.9 361 60.9
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 4.5e-110 402.1 367 59.1
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 7.6e-110 401.4 357 57.1
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 7.6e-110 401.4 363 60.6
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 2.2e-109 399.8 316 65.2
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 2.2e-109 399.8 348 58.9
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 4.9e-109 398.7 323 63.2
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 8.4e-109 397.9 351 59.0
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 3.2e-108 396.0 338 62.7
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 3.2e-108 396.0 326 63.5
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 3.2e-108 396.0 343 63.8
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 7.1e-108 394.8 372 59.4
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 7.1e-108 394.8 368 60.3
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 9.3e-108 394.4 362 59.4
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 2.1e-107 393.3 362 59.1
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 8.7e-106 387.9 370 57.0
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 1.5e-105 387.1 361 60.7
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 1.3e-104 384.0 364 58.2
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 1.6e-104 383.6 368 57.6
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.6e-104 383.6 333 64.0
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 1.4e-103 380.6 356 58.7
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 3.1e-103 379.4 356 58.7
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 3.1e-103 379.4 356 58.7
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 8.4e-101 371.3 296 62.8
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 2.5e-100 369.8 322 60.6
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 3.2e-100 369.4 286 63.3
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 7.1e-100 368.2 340 57.9
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 1.3e-98 364.0 228 76.3
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 8.7e-98 361.3 288 63.5
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 1.5e-97 360.5 359 56.0
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 1.9e-97 360.1 364 54.9
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 8.2e-96 354.8 345 55.9
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 5.3e-95 352.1 333 58.6
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 8.4e-93 344.7 373 51.7
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 4.2e-92 342.4 338 55.3
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 1.6e-91 340.5 277 61.7
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 2.7e-91 339.7 245 65.3
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 4.6e-91 339.0 320 52.5
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 1.0e-85 321.2 300 59.3
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 1.4e-82 310.8 262 65.3
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 5.3e-79 298.9 369 45.3
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 1.7e-77 293.9 369 47.7
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 7.5e-65 251.9 239 60.3
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 6.3e-64 248.8 267 53.9
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 6.5e-61 238.8 351 39.9
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 1.2e-59 234.6 234 57.3
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 1.2e-59 234.6 404 37.1
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 3.0e-58 229.9 309 42.1
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 6.8e-58 228.8 216 56.9
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 8.3e-56 221.9 304 41.1
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 5.0e-53 212.6 338 41.1
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 5.5e-52 209.1 268 39.6
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.5e-44 184.5 193 46.1
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 4.3e-44 183.0 164 54.9
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 1.4e-39 167.9 382 34.8
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 3.2e-31 140.2 174 52.9
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 5.4e-31 139.4 186 52.2
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 1.4e-26 124.8 127 48.0
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 1.3e-16 91.7 152 44.1
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 3.3e-12 77.0 170 35.9
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 1.2e-09 68.6 41 70.7
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.1e-07 62.0 33 78.8
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 2.1e-06 57.8 108 37.0


User provided reference genes

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