Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B01875 Eucalyptus grandis HOM05D006315 ORTHO05D008052 2.7e-79 298.5 144 100.0
Eucgr.B01969 Eucalyptus grandis HOM05D006315 ORTHO05D008052 3.3e-77 291.6 144 97.9
TAR381G0108 Trochodendron aralioides HOM05D006315 ORTHO05D008052 6.1e-71 270.8 144 88.2
GSVIVG01000051001 Vitis vinifera HOM05D006315 ORTHO05D008052 5.2e-70 267.7 144 88.9
QL03p006996 Quercus lobata HOM05D006315 ORTHO05D008052 6.8e-70 267.3 143 88.1
Actinidia05703 Actinidia chinensis HOM05D006315 ORTHO05D008052 1.2e-69 266.5 144 86.1
vmacro05019 Vaccinium macrocarpon HOM05D006315 ORTHO05D008052 1.2e-69 266.5 144 86.8
Cpa.g.sc48.53 Carica papaya HOM05D006315 ORTHO05D008052 3.4e-69 265.0 144 86.8
Dinv40287 Davidia involucrata HOM05D006315 ORTHO05D008052 9.8e-69 263.5 144 86.8
RhsimUnG0225800 Rhododendron simsii HOM05D006315 ORTHO05D008052 1.3e-68 263.1 144 86.1
Manes.09G167100 Manihot esculenta HOM05D006315 ORTHO05D008052 6.3e-68 260.8 144 86.1
Nn6g32180 Nelumbo nucifera HOM05D006315 ORTHO05D008052 6.3e-68 260.8 144 85.4
CSS0039769 Camellia sinensis var. sinensis HOM05D006315 ORTHO05D008052 8.3e-68 260.4 144 84.0
Aqoxy6G00442 Aquilegia oxysepala HOM05D006315 ORTHO05D008052 1.1e-67 260.0 144 84.7
MBI01_g44539_MAGBIO Magnolia biondii HOM05D006315 ORTHO05D008052 1.1e-67 260.0 144 86.1
Prupe.6G325900 Prunus persica HOM05D006315 ORTHO05D008052 1.8e-67 259.2 144 84.0
ATR1120G073 Amborella trichopoda HOM05D006315 ORTHO05D008052 4.1e-67 258.1 144 84.0
PGR083G2010 Punica granatum HOM05D006315 ORTHO05D008052 4.1e-67 258.1 144 86.8
Cfa006589 Carpinus fangiana HOM05D006315 ORTHO05D008052 5.4e-67 257.7 144 84.0
RcHm_v2.0_Chr3g0454751 Rosa chinensis HOM05D006315 ORTHO05D008052 9.1e-67 256.9 144 80.6
CiPaw.07G017800 Carya illinoinensis HOM05D006315 ORTHO05D008052 1.2e-66 256.5 144 84.0
COL.COLO4_13471 Corchorus olitorius HOM05D006315 ORTHO05D008052 1.6e-66 256.1 144 84.0
FAN02G1008 Fragaria x ananassa HOM05D006315 ORTHO05D008052 2.0e-66 255.8 144 80.6
Ciclev10001688m.g Citrus clementina HOM05D006315 ORTHO05D008052 2.7e-66 255.4 144 83.3
FvH4_6g05840 Fragaria vesca HOM05D006315 ORTHO05D008052 5.9e-66 254.2 144 79.9
FAN09G2245 Fragaria x ananassa HOM05D006315 ORTHO05D008052 5.9e-66 254.2 144 79.9
FAN14G1304 Fragaria x ananassa HOM05D006315 ORTHO05D008052 5.9e-66 254.2 144 79.9
FAN14G3373 Fragaria x ananassa HOM05D006315 ORTHO05D008052 5.9e-66 254.2 144 79.9
Duzib128G1131 Durio zibethinus HOM05D006315 ORTHO05D008052 1.0e-65 253.4 144 82.6
FAN05G4943 Fragaria x ananassa HOM05D006315 ORTHO05D008052 1.0e-65 253.4 144 79.9
Lsat_1_v5_gn_9_86000 Lactuca sativa HOM05D006315 ORTHO05D008052 1.3e-65 253.1 144 81.9
PSO675G8687 Papaver somniferum HOM05D006315 ORTHO05D008052 1.3e-65 253.1 148 81.8
Cc02_g33440 Coffea canephora HOM05D006315 ORTHO05D008052 1.7e-65 252.7 144 82.6
Solyc01g098990.4 Solanum lycopersicum HOM05D006315 ORTHO05D008052 1.7e-65 252.7 144 82.6
Sopen01g042560 Solanum pennellii HOM05D006315 ORTHO05D008052 1.7e-65 252.7 144 82.6
PGSC0003DMG400018995 Solanum tuberosum HOM05D006315 ORTHO05D008052 1.7e-65 252.7 144 82.6
Potri.013G020800 Populus trichocarpa HOM05D006315 ORTHO05D008052 5.0e-65 251.1 144 81.2
Thecc.05G303200 Theobroma cacao HOM05D006315 ORTHO05D008052 6.5e-65 250.8 144 80.6
CAN.G1034.11 Capsicum annuum HOM05D006315 ORTHO05D008052 1.1e-64 250.0 144 81.2
THA.LOC104818698 Tarenaya hassleriana HOM05D006315 ORTHO05D008052 1.1e-64 250.0 144 84.0
Gohir.A11G265000 Gossypium hirsutum HOM05D006315 ORTHO05D008052 1.5e-64 249.6 144 81.2
HanXRQChr02g0046151 Helianthus annuus HOM05D006315 ORTHO05D008052 2.5e-64 248.8 144 77.8
Oeu020852.1 Olea europaea HOM05D006315 ORTHO05D008052 2.5e-64 248.8 144 82.6
SalBow8G0023 Salvia bowleyana HOM05D006315 ORTHO05D008052 2.5e-64 248.8 144 81.9
Gohir.D11G275200 Gossypium hirsutum HOM05D006315 ORTHO05D008052 4.2e-64 248.1 144 80.6
Gorai.007G297000 Gossypium raimondii HOM05D006315 ORTHO05D008052 4.2e-64 248.1 144 80.6
TWI36G1375 Tripterygium wilfordii HOM05D006315 ORTHO05D008052 4.2e-64 248.1 144 79.9
AL6G39450 Arabidopsis lyrata HOM05D006315 ORTHO05D008052 5.5e-64 247.7 139 82.7
ECA236G1566 Erigeron canadensis HOM05D006315 ORTHO05D008052 5.5e-64 247.7 144 78.5
AUR62000828 Chenopodium quinoa HOM05D006315 ORTHO05D008052 1.2e-63 246.5 144 79.2
MD12G1219300 Malus domestica HOM05D006315 ORTHO05D008052 1.2e-63 246.5 144 79.2
AUR62005146 Chenopodium quinoa HOM05D006315 ORTHO05D008052 1.6e-63 246.1 144 79.2
Sabra13G0023200 Salix brachista HOM05D006315 ORTHO05D008052 1.6e-63 246.1 144 78.5
Sp2g20750 Schrenkiella parvula HOM05D006315 ORTHO05D008052 1.6e-63 246.1 141 80.1
Peaxi162Scf00037g00325 Petunia axillaris HOM05D006315 ORTHO05D008052 2.1e-63 245.7 144 80.6
Aa31LG11G9300 Aethionema arabicum HOM05D006315 ORTHO05D008052 3.6e-63 245.0 141 80.1
Carub.0006s2500 Capsella rubella HOM05D006315 ORTHO05D008052 3.6e-63 245.0 140 82.1
Nitab4.5_0000137g0320 Nicotiana tabacum HOM05D006315 ORTHO05D008052 4.7e-63 244.6 144 80.6
Thhalv10004542m.g Eutrema salsugineum HOM05D006315 ORTHO05D008052 8.0e-63 243.8 141 78.7
AT5G27560 Arabidopsis thaliana HOM05D006315 ORTHO05D008052 1.0e-62 243.4 136 83.1
CARHR186120 Cardamine hirsuta HOM05D006315 ORTHO05D008052 1.0e-62 243.4 139 81.3
Sed0013855 Sechium edule HOM05D006315 ORTHO05D008052 1.0e-62 243.4 144 82.6
ClCG02G015800 Citrullus lanatus HOM05D006315 ORTHO05D008052 1.4e-62 243.0 144 81.9
Lalb_Chr02g0148251 Lupinus albus HOM05D006315 ORTHO05D008052 1.8e-62 242.7 141 79.4
Atru.chr2.406 Acer truncatum HOM05D006315 ORTHO05D008052 2.3e-62 242.3 144 77.8
A09p05350 Brassica napus HOM05D006315 ORTHO05D008052 3.0e-62 241.9 141 78.7
C09p05830 Brassica napus HOM05D006315 ORTHO05D008052 3.0e-62 241.9 141 78.7
BolC9t53510H Brassica oleracea HOM05D006315 ORTHO05D008052 3.0e-62 241.9 141 78.7
BraA09t36173Z Brassica rapa HOM05D006315 ORTHO05D008052 3.0e-62 241.9 141 78.7
Nitab4.5_0004395g0040 Nicotiana tabacum HOM05D006315 ORTHO05D008052 5.2e-62 241.1 144 79.9
CsaV3_2G005300 Cucumis sativus L. HOM05D006315 ORTHO05D008052 1.2e-61 240.0 144 81.2
CDE06G2073 Ceratophyllum demersum HOM05D006315 ORTHO05D008052 2.0e-61 239.2 144 77.8
Sc06g0003310 Simmondsia chinensis HOM05D006315 ORTHO05D008052 4.4e-61 238.0 144 79.2
MSTRG.16964 Avicennia marina HOM05D006315 ORTHO05D008052 2.2e-60 235.7 144 77.8
FAN05G5779 Fragaria x ananassa HOM05D006315 ORTHO05D008052 6.3e-60 234.2 164 68.3
VMungo0720G2927 Vigna mungo HOM05D006315 ORTHO05D008052 6.3e-60 234.2 141 76.6
Phvul.007G180000 Phaseolus vulgaris HOM05D006315 ORTHO05D008052 8.3e-60 233.8 141 76.6
Ah.06g189370 Amaranthus hybridus HOM05D006315 ORTHO05D008052 2.4e-59 232.3 135 79.3
DCAR_022164 Daucus carota HOM05D006315 ORTHO05D008052 9.2e-59 230.3 144 72.2
Eucgr.B01970 Eucalyptus grandis HOM05D006315 ORTHO05D008052 2.0e-58 229.2 144 80.6
Lj5g0002172 Lotus japonicus HOM05D006315 ORTHO05D008052 2.7e-58 228.8 141 73.8
arahy.Tifrunner.gnm1.ann1.9IE074 Arachis hypogaea HOM05D006315 ORTHO05D008052 5.9e-58 227.6 141 76.6
PSO541G4223 Papaver somniferum HOM05D006315 ORTHO05D008052 7.8e-58 227.3 128 83.6
unitig_37.g12631 Utricularia gibba HOM05D006315 ORTHO05D008052 7.8e-58 227.3 144 76.4
Ca_10111_v3 Cicer arietinum L. HOM05D006315 ORTHO05D008052 1.0e-57 226.9 140 75.7
Medtr1g082900 Medicago truncatula HOM05D006315 ORTHO05D008052 2.9e-57 225.3 140 74.3
TPR.G6112 Trifolium pratense HOM05D006315 ORTHO05D008052 2.9e-57 225.3 142 73.2
Migut.B01035 Erythranthe guttata HOM05D006315 ORTHO05D008052 3.8e-57 224.9 144 75.0
Hund07070 Selenicereus undatus HOM05D006315 ORTHO05D008052 4.3e-56 221.5 144 75.0
Glyma.20G234000 Glycine max HOM05D006315 ORTHO05D008052 3.6e-55 218.4 142 73.9
Psat6g151200 Pisum sativum HOM05D006315 ORTHO05D008052 3.6e-55 218.4 142 71.1
Glyma.10G154300 Glycine max HOM05D006315 ORTHO05D008052 4.7e-55 218.0 142 71.8
MELO3C004257.2 Cucumis melo HOM05D006315 ORTHO05D008052 2.4e-51 205.7 110 87.3
SEGI_29864 Sequoiadendron giganteum HOM05D006315 ORTHO05D008052 1.5e-48 196.4 146 64.4
SGA_v2.0_scaffold13G06358 Striga asiatica HOM05D006315 ORTHO05D008052 1.9e-48 196.1 108 81.5
Zm00001eb377150 Zea mays HOM05D006315 ORTHO05D008052 1.4e-46 189.9 120 70.8
Haze_04196 Corylus avellana HOM05D006315 ORTHO05D008052 1.5e-40 169.9 144 62.5
arahy.Tifrunner.gnm1.ann1.SMKB8G Arachis hypogaea HOM05D006315 ORTHO05D008052 2.5e-40 169.1 141 62.4
AagrBONN_evm.TU.Sc2ySwM_368.1535 Anthoceros agrestis HOM05D006315 ORTHO05D008052 3.3e-40 168.7 140 57.9
SMO116G0320 Selaginella moellendorffii HOM05D006315 ORTHO05D008052 1.5e-37 159.8 149 51.0
EL10Ac4g09351 Beta vulgaris HOM05D006315 ORTHO05D008052 4.9e-36 154.8 101 75.2
Mapoly0046s0092 Marchantia polymorpha HOM05D006315 ORTHO05D008052 3.5e-34 148.7 153 50.3
Pp3c1_23410 Physcomitrium patens HOM05D006315 ORTHO05D008052 5.2e-30 134.8 149 46.3
Lj5P531T4 Lonicera japonica HOM05D006315 ORTHO05D008052 9.2e-27 124.0 83 72.3
Lj5A533G15 Lonicera japonica HOM05D006315 ORTHO05D008052 6.9e-22 107.8 53 92.5
Lj5P469T8 Lonicera japonica HOM05D006315 ORTHO05D008052 6.9e-22 107.8 53 92.5
Lj5C470G0 Lonicera japonica HOM05D006315 ORTHO05D008052 5.4e-19 98.2 45 93.3
Lj5C532G5 Lonicera japonica HOM05D006315 ORTHO05D008052 5.4e-19 98.2 45 93.3
Cre17.g739550 Chlamydomonas reinhardtii HOM05D006315 ORTHO05D008052 3.5e-18 95.5 133 39.8
Aa31LG11G9280 Aethionema arabicum HOM05D006315 ORTHO05D059511 1.3e-17 93.6 54 77.8
PRCOL_00006277 Prasinoderma coloniale HOM05D006315 ORTHO05D008052 6.6e-17 91.3 113 38.9
arahy.Tifrunner.gnm1.ann1.T3AGRQ Arachis hypogaea HOM05D006315 ORTHO05D008052 2.5e-16 89.4 55 72.7
MCO15G525 Micromonas commoda HOM05D006315 ORTHO05D008052 3.6e-15 85.5 127 34.6
Lj5A470G9 Lonicera japonica HOM05D006315 ORTHO05D008052 9.3e-11 70.9 120 39.2
Lj5A532G12 Lonicera japonica HOM05D006315 ORTHO05D008052 3.5e-10 68.9 120 39.2
Lj5A532G11 Lonicera japonica HOM05D006315 ORTHO05D008052 2.3e-09 66.2 120 37.5
HPP92_002889 Vanilla planifolia HOM05D006315 ORTHO05D008052 2.8e-07 59.3 51 54.9


User provided reference genes

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