Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B01867 Eucalyptus grandis HOM05D000005 ORTHO05D191300 7.6e-63 246.1 116 100.0
Lj7A431G89 Lonicera japonica HOM05D000005 ORTHO05D017002 3.6e-12 77.8 80 41.2
Eucgr.L01871 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.9e-11 74.3 69 44.9
Eucgr.C04267 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.5e-10 72.4 69 44.9
Eucgr.E03177 Eucalyptus grandis HOM05D000009 ORTHO05D007072 1.5e-10 72.4 76 46.1
Lju1058C1T2 Lonicera japonica HOM05D000005 ORTHO05D007073 1.5e-10 72.4 124 35.5
Eucgr.C04271 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.0e-10 72.0 69 44.9
Eucgr.C01968 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.6e-10 71.6 104 38.5
Eucgr.E03194 Eucalyptus grandis HOM05D000009 ORTHO05D007072 2.6e-10 71.6 74 45.9
Eucgr.D01599 Eucalyptus grandis HOM05D000005 ORTHO05D011459 9.7e-10 69.7 102 40.2
PGR042G3882 Punica granatum HOM05D000005 ORTHO05D000012 9.7e-10 69.7 94 37.2
Lj7C432T1 Lonicera japonica HOM05D000005 ORTHO05D007073 2.8e-09 68.2 70 45.7
Lj1A230T36 Lonicera japonica HOM05D000005 ORTHO05D007073 3.7e-09 67.8 109 35.8
Lj1A243T46 Lonicera japonica HOM05D000005 ORTHO05D007073 3.7e-09 67.8 72 43.1
Lj3A414G28 Lonicera japonica HOM05D000005 ORTHO05D007073 3.7e-09 67.8 126 34.9
Eucgr.E03171 Eucalyptus grandis HOM05D000005 ORTHO05D007072 4.8e-09 67.4 107 35.5
Lj3A646G59 Lonicera japonica HOM05D000005 ORTHO05D007073 4.8e-09 67.4 72 47.2
PGR142G3641 Punica granatum HOM05D000005 ORTHO05D000012 4.8e-09 67.4 72 45.8
PGR142G4113 Punica granatum HOM05D000005 ORTHO05D000012 4.8e-09 67.4 99 35.4
Eucgr.C01492 Eucalyptus grandis HOM05D000005 ORTHO05D007073 8.2e-09 66.6 133 30.1
Lj5A534G47 Lonicera japonica HOM05D000005 ORTHO05D007073 8.2e-09 66.6 139 32.4
Eucgr.C02650 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.1e-08 66.2 70 47.1
Lj3A643T71 Lonicera japonica HOM05D000005 ORTHO05D007073 1.1e-08 66.2 72 45.8
Lj7A434T48 Lonicera japonica HOM05D000005 ORTHO05D007073 1.1e-08 66.2 107 36.4
PGR142G0579 Punica granatum HOM05D000005 ORTHO05D000012 1.1e-08 66.2 72 41.7
PGR142G4362 Punica granatum HOM05D000005 ORTHO05D000239 1.1e-08 66.2 99 35.4
Eucgr.C01847 Eucalyptus grandis HOM05D000467 ORTHO05D007073 1.4e-08 65.9 110 37.3
Eucgr.E03173 Eucalyptus grandis HOM05D000009 ORTHO05D007072 1.4e-08 65.9 69 44.9
Lj1A231T34 Lonicera japonica HOM05D000005 ORTHO05D007073 1.4e-08 65.9 72 41.7
Lj3C642T7 Lonicera japonica HOM05D000005 ORTHO05D007073 1.4e-08 65.9 72 47.2
Lj6P341T8 Lonicera japonica HOM05D000005 ORTHO05D007073 1.4e-08 65.9 72 44.4
Eucgr.C02567 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.8e-08 65.5 95 36.8
Lj3C642G0 Lonicera japonica HOM05D000005 ORTHO05D017002 1.8e-08 65.5 72 43.1
Eucgr.C03975 Eucalyptus grandis HOM05D000005 ORTHO05D007073 2.4e-08 65.1 76 40.8
Lju170A26G31 Lonicera japonica HOM05D000005 ORTHO05D007073 2.4e-08 65.1 78 42.3
PGR004G2233 Punica granatum HOM05D000005 ORTHO05D011459 2.4e-08 65.1 76 46.1
PGR065G0010 Punica granatum HOM05D000005 ORTHO05D011459 2.4e-08 65.1 76 46.1
PGR142G3011 Punica granatum HOM05D000005 ORTHO05D000012 2.4e-08 65.1 72 41.7
Lj3A643G73 Lonicera japonica HOM05D000005 ORTHO05D007073 3.1e-08 64.7 110 31.8
PGR102G1827 Punica granatum HOM05D000005 ORTHO05D007073 3.1e-08 64.7 77 41.6
Lju743C1G11 Lonicera japonica HOM05D000005 ORTHO05D007073 4.1e-08 64.3 85 42.4
Eucgr.E02001 Eucalyptus grandis HOM05D000005 ORTHO05D011459 7.0e-08 63.5 105 39.0
Lj3A645T64 Lonicera japonica HOM05D000005 ORTHO05D007073 7.0e-08 63.5 70 42.9
PGR142G1047 Punica granatum HOM05D000005 ORTHO05D000012 7.0e-08 63.5 79 38.0
Eucgr.E01983 Eucalyptus grandis HOM05D000005 ORTHO05D011459 9.1e-08 63.2 96 40.6
PGR044G0625 Punica granatum HOM05D000005 ORTHO05D000012 9.1e-08 63.2 131 31.3
Eucgr.C02630 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.2e-07 62.8 73 43.8
Lj7A486G71 Lonicera japonica HOM05D000005 ORTHO05D007073 1.2e-07 62.8 103 34.0
PGR044G1420 Punica granatum HOM05D000005 ORTHO05D011459 1.2e-07 62.8 90 38.9
PGR142G0007 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-07 62.8 79 38.0
Eucgr.E03184 Eucalyptus grandis HOM05D000009 ORTHO05D007072 1.5e-07 62.4 93 36.6
Eucgr.C02646 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.0e-07 62.0 96 39.6
Eucgr.D01587 Eucalyptus grandis HOM05D000005 ORTHO05D011459 2.0e-07 62.0 105 37.1
PGR142G1897 Punica granatum HOM05D000005 ORTHO05D000012 2.0e-07 62.0 77 40.3
Eucgr.E03203 Eucalyptus grandis HOM05D000009 ORTHO05D007072 2.6e-07 61.6 68 41.2
Lj7A486G72 Lonicera japonica HOM05D000005 ORTHO05D007073 2.6e-07 61.6 70 42.9
Lj7P433T41 Lonicera japonica HOM05D000005 ORTHO05D007073 2.6e-07 61.6 54 50.0
PGR142G0294 Punica granatum HOM05D000005 ORTHO05D000012 2.6e-07 61.6 72 40.3
PGR142G0858 Punica granatum HOM05D000005 ORTHO05D000012 2.6e-07 61.6 72 40.3
PGR044G0200 Punica granatum HOM05D000005 ORTHO05D011459 3.4e-07 61.2 68 42.6
PGR142G0894 Punica granatum HOM05D000005 ORTHO05D000012 3.4e-07 61.2 72 38.9
Eucgr.C00297 Eucalyptus grandis HOM05D000005 ORTHO05D007073 4.5e-07 60.8 92 39.1
Lj3P301T7 Lonicera japonica HOM05D000005 ORTHO05D007073 4.5e-07 60.8 72 43.1
Lj7A475T54 Lonicera japonica HOM05D000005 ORTHO05D007073 4.5e-07 60.8 84 39.3
Lj2C875T0 Lonicera japonica HOM05D010250 ORTHO05D007073 5.9e-07 60.5 105 37.1
Lj3P646T15 Lonicera japonica HOM05D000005 ORTHO05D007073 5.9e-07 60.5 70 40.0
Lj7A435T54 Lonicera japonica HOM05D000005 ORTHO05D007073 5.9e-07 60.5 70 37.1
Lj7C433G3 Lonicera japonica HOM05D000005 ORTHO05D007073 5.9e-07 60.5 70 42.9
PGR042G2658 Punica granatum HOM05D000005 ORTHO05D000012 5.9e-07 60.5 72 41.7
PGR044G1253 Punica granatum HOM05D000005 ORTHO05D000012 5.9e-07 60.5 95 40.0
PGR142G1610 Punica granatum HOM05D000005 ORTHO05D000012 5.9e-07 60.5 70 38.6
PGR142G3284 Punica granatum HOM05D000005 ORTHO05D000012 5.9e-07 60.5 72 40.3
Eucgr.C01654 Eucalyptus grandis HOM05D000005 ORTHO05D017911 7.7e-07 60.1 116 31.9
Eucgr.C02628 Eucalyptus grandis HOM05D000005 ORTHO05D007072 7.7e-07 60.1 70 42.9
Eucgr.L00696 Eucalyptus grandis HOM05D000005 ORTHO05D000012 7.7e-07 60.1 73 42.5
Lj7A476T51 Lonicera japonica HOM05D000005 ORTHO05D007073 7.7e-07 60.1 84 36.9
PGR044G0375 Punica granatum HOM05D000005 ORTHO05D000012 7.7e-07 60.1 92 38.0
PGR044G0444 Punica granatum HOM05D000005 ORTHO05D000012 1.0e-06 59.7 68 42.6
PGR142G2505 Punica granatum HOM05D000005 ORTHO05D000012 1.0e-06 59.7 70 37.1
PGR142G4010 Punica granatum HOM05D000005 ORTHO05D000012 1.0e-06 59.7 70 37.1
Eucgr.C00289 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.3e-06 59.3 70 41.4
Eucgr.E01971 Eucalyptus grandis HOM05D000005 ORTHO05D011459 1.3e-06 59.3 105 37.1
Eucgr.F04314 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.3e-06 59.3 70 44.3
Lj2A857T87 Lonicera japonica HOM05D000005 ORTHO05D007073 1.3e-06 59.3 78 42.3
Lj2C880G10 Lonicera japonica HOM05D000005 ORTHO05D007073 1.3e-06 59.3 78 42.3
Eucgr.C02633 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.7e-06 58.9 77 39.0
PGR044G1147 Punica granatum HOM05D000005 ORTHO05D000012 1.7e-06 58.9 90 40.0
Lj2A854T51 Lonicera japonica HOM05D000005 ORTHO05D007073 2.2e-06 58.5 105 34.3
Lj3A119G28 Lonicera japonica HOM05D000005 ORTHO05D007073 2.2e-06 58.5 114 32.5
Lju3086C0T2 Lonicera japonica HOM05D000005 ORTHO05D007073 2.2e-06 58.5 124 33.9
Eucgr.E01998 Eucalyptus grandis HOM05D000005 ORTHO05D011459 2.9e-06 58.2 105 35.2
Lj3A473T11 Lonicera japonica HOM05D000005 ORTHO05D007073 2.9e-06 58.2 75 42.7
PGR004G1672 Punica granatum HOM05D000005 ORTHO05D000012 2.9e-06 58.2 69 42.0
PGR119G0377 Punica granatum HOM05D000005 ORTHO05D000012 2.9e-06 58.2 70 40.0
PGR142G2372 Punica granatum HOM05D000005 ORTHO05D000012 2.9e-06 58.2 100 35.0
Lj2A878T49 Lonicera japonica HOM05D000005 ORTHO05D007073 3.8e-06 57.8 70 40.0
Lj2C876T10 Lonicera japonica HOM05D000005 ORTHO05D007073 5.0e-06 57.4 70 40.0
Lj3A214T1 Lonicera japonica HOM05D000005 ORTHO05D007073 5.0e-06 57.4 63 41.3
PGR042G1273 Punica granatum HOM05D000005 ORTHO05D000012 5.0e-06 57.4 71 38.0
PGR142G4263 Punica granatum HOM05D000005 ORTHO05D000012 5.0e-06 57.4 108 35.2
Eucgr.G02264 Eucalyptus grandis HOM05D000005 ORTHO05D007073 6.5e-06 57.0 110 32.7
PGR044G1444 Punica granatum HOM05D000005 ORTHO05D011459 6.5e-06 57.0 69 43.5
PGR044G1988 Punica granatum HOM05D000005 ORTHO05D011459 6.5e-06 57.0 92 38.0
Eucgr.C00513 Eucalyptus grandis HOM05D000005 ORTHO05D011459 8.5e-06 56.6 75 38.7
Lj2C857T7 Lonicera japonica HOM05D000005 ORTHO05D007073 8.5e-06 56.6 105 33.3
Lj3A642T75 Lonicera japonica HOM05D000005 ORTHO05D007073 8.5e-06 56.6 72 40.3
PGR142G2663 Punica granatum HOM05D000005 ORTHO05D000012 8.5e-06 56.6 72 38.9


User provided reference genes

Program Settings