Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B01773 Eucalyptus grandis HOM05D003188 ORTHO05D003602 5.0e-75 284.6 177 100.0
Eucgr.E01579 Eucalyptus grandis HOM05D003188 ORTHO05D003602 2.0e-31 139.8 129 80.6
Eucgr.B00695 Eucalyptus grandis HOM05D003188 ORTHO05D003602 3.7e-09 65.9 34 91.2
Ciclev10019993m.g Citrus clementina HOM05D003188 ORTHO05D003602 1.2e-07 60.8 33 84.8
Solyc03g119790.3 Solanum lycopersicum HOM05D003188 ORTHO05D003602 2.6e-07 59.7 35 80.0
Sopen03g038640 Solanum pennellii HOM05D003188 ORTHO05D003602 2.6e-07 59.7 35 80.0
CAN.G438.112 Capsicum annuum HOM05D003188 ORTHO05D003602 3.4e-07 59.3 33 81.8
Nitab4.5_0000410g0090 Nicotiana tabacum HOM05D003188 ORTHO05D003602 3.4e-07 59.3 33 81.8
Nitab4.5_0003716g0120 Nicotiana tabacum HOM05D003188 ORTHO05D003602 3.4e-07 59.3 33 81.8
SalBow7G4400 Salvia bowleyana HOM05D003188 ORTHO05D003602 3.4e-07 59.3 33 81.8
PGSC0003DMG400005704 Solanum tuberosum HOM05D003188 ORTHO05D003602 3.4e-07 59.3 33 81.8
THA.LOC104803141 Tarenaya hassleriana HOM05D003188 ORTHO05D003602 3.4e-07 59.3 32 81.2
Peaxi162Scf00015g00637 Petunia axillaris HOM05D003188 ORTHO05D003602 4.5e-07 58.9 32 84.4
Actinidia30194 Actinidia chinensis HOM05D003188 ORTHO05D003602 5.9e-07 58.5 35 80.0
arahy.Tifrunner.gnm1.ann1.8N8EX2 Arachis hypogaea HOM05D003188 ORTHO05D003602 7.7e-07 58.2 33 78.8
MSTRG.14163 Avicennia marina HOM05D003188 ORTHO05D003602 7.7e-07 58.2 33 78.8
CANSAT64G2546 Cannabis sativa HOM05D003188 ORTHO05D003602 7.7e-07 58.2 33 78.8
Cpa.g.sc3890.1 Carica papaya HOM05D003188 ORTHO05D003602 7.7e-07 58.2 33 78.8
Cfa016042 Carpinus fangiana HOM05D003188 ORTHO05D003602 7.7e-07 58.2 33 78.8
CiPaw.09G173500 Carya illinoinensis HOM05D003188 ORTHO05D003602 7.7e-07 58.2 33 78.8
ClCG06G015050 Citrullus lanatus HOM05D003188 ORTHO05D003602 7.7e-07 58.2 33 78.8
Cc04_g07560 Coffea canephora HOM05D003188 ORTHO05D003602 7.7e-07 58.2 33 78.8
Haze_18599 Corylus avellana HOM05D003188 ORTHO05D003602 7.7e-07 58.2 33 78.8
MELO3C017285.2 Cucumis melo HOM05D003188 ORTHO05D003602 7.7e-07 58.2 33 78.8
CsaV3_1G003600 Cucumis sativus L. HOM05D003188 ORTHO05D003602 7.7e-07 58.2 33 78.8
Dinv36902 Davidia involucrata HOM05D003188 ORTHO05D003602 7.7e-07 58.2 33 78.8
Manes.01G020800 Manihot esculenta HOM05D003188 ORTHO05D003602 7.7e-07 58.2 33 78.8
Manes.12G158000 Manihot esculenta HOM05D003188 ORTHO05D003602 7.7e-07 58.2 33 81.8
RcHm_v2.0_Chr7g0184541 Rosa chinensis HOM05D003188 ORTHO05D003602 7.7e-07 58.2 33 78.8
GSVIVG01012261001 Vitis vinifera HOM05D003188 ORTHO05D003602 7.7e-07 58.2 34 76.5
GSVIVG01029101001 Vitis vinifera HOM05D003188 ORTHO05D003602 7.7e-07 58.2 33 78.8
MSTRG.6539 Avicennia marina HOM05D003188 ORTHO05D003602 1.0e-06 57.8 33 78.8
Glyma.04G146000 Glycine max HOM05D003188 ORTHO05D003602 1.0e-06 57.8 33 78.8
Glyma.06G210400 Glycine max HOM05D003188 ORTHO05D003602 1.0e-06 57.8 33 78.8
Phvul.009G200700 Phaseolus vulgaris HOM05D003188 ORTHO05D003602 1.0e-06 57.8 33 78.8
Rhsim09G0110300 Rhododendron simsii HOM05D003188 ORTHO05D003602 1.0e-06 57.8 33 78.8
VMungo1309G2361 Vigna mungo HOM05D003188 ORTHO05D003602 1.0e-06 57.8 33 78.8
DCAR_015131 Daucus carota HOM05D003188 ORTHO05D003602 1.3e-06 57.4 33 78.8
Lsat_1_v5_gn_8_11621 Lactuca sativa HOM05D003188 ORTHO05D003602 1.3e-06 57.4 33 78.8
Sed0010135 Sechium edule HOM05D003188 ORTHO05D003602 1.7e-06 57.0 33 75.8
TAR371G0535 Trochodendron aralioides HOM05D003188 ORTHO05D003602 1.7e-06 57.0 33 75.8
arahy.Tifrunner.gnm1.ann1.73QXIF Arachis hypogaea HOM05D003188 ORTHO05D003602 2.2e-06 56.6 33 75.8
Lj2g0027481 Lotus japonicus HOM05D003188 ORTHO05D003602 2.2e-06 56.6 33 75.8
Lj4g0026321 Lotus japonicus HOM05D003188 ORTHO05D003602 2.2e-06 56.6 33 75.8
PGR083G2637 Punica granatum HOM05D003188 ORTHO05D003602 2.2e-06 56.6 33 75.8
TWI15G1168 Tripterygium wilfordii HOM05D003188 ORTHO05D003602 2.2e-06 56.6 33 75.8
CDE05G0460 Ceratophyllum demersum HOM05D003188 ORTHO05D003602 2.9e-06 56.2 33 75.8
Duzib133G0881 Durio zibethinus HOM05D003188 ORTHO05D003602 2.9e-06 56.2 33 75.8
ECA234G2517 Erigeron canadensis HOM05D003188 ORTHO05D003602 2.9e-06 56.2 33 75.8
Gohir.D11G162400 Gossypium hirsutum HOM05D003188 ORTHO05D003602 2.9e-06 56.2 33 75.8
Gorai.007G172700 Gossypium raimondii HOM05D003188 ORTHO05D003602 2.9e-06 56.2 33 75.8
HanXRQChr02g0055261 Helianthus annuus HOM05D003188 ORTHO05D003602 2.9e-06 56.2 33 75.8
Thecc.01G174500 Theobroma cacao HOM05D003188 ORTHO05D003602 2.9e-06 56.2 33 75.8
MD06G1210700 Malus domestica HOM05D003188 ORTHO05D003602 3.8e-06 55.8 33 75.8
SGA_v2.0_scaffold34G13894 Striga asiatica HOM05D003188 ORTHO05D003602 3.8e-06 55.8 32 78.1
ATR0580G381 Amborella trichopoda HOM05D003188 ORTHO05D003602 5.0e-06 55.5 35 71.4
ATR0787G140 Amborella trichopoda HOM05D003188 ORTHO05D003602 5.0e-06 55.5 35 71.4
AUR62009031 Chenopodium quinoa HOM05D003188 ORTHO05D003602 5.0e-06 55.5 32 75.0
Ca_02535_v3 Cicer arietinum L. HOM05D003188 ORTHO05D003602 5.0e-06 55.5 33 72.7
DCAR_011343 Daucus carota HOM05D003188 ORTHO05D003602 5.0e-06 55.5 35 71.4
Glyma.05G013500 Glycine max HOM05D003188 ORTHO05D003602 5.0e-06 55.5 33 72.7
Oeu058326.2 Olea europaea HOM05D003188 ORTHO05D003602 5.0e-06 55.5 32 78.1
Psat4g043680 Pisum sativum HOM05D003188 ORTHO05D003602 5.0e-06 55.5 33 72.7
TPR.G26763 Trifolium pratense HOM05D003188 ORTHO05D003602 5.0e-06 55.5 33 72.7
AUR62023272 Chenopodium quinoa HOM05D003188 ORTHO05D003602 6.5e-06 55.1 31 77.4
FAN08G1208 Fragaria x ananassa HOM05D003188 ORTHO05D003602 6.5e-06 55.1 33 72.7
FAN18G0006 Fragaria x ananassa HOM05D003188 ORTHO05D003602 6.5e-06 55.1 33 72.7
vmacro10787 Vaccinium macrocarpon HOM05D003188 ORTHO05D003602 6.5e-06 55.1 33 75.8
arahy.Tifrunner.gnm1.ann1.36CJM4 Arachis hypogaea HOM05D003188 ORTHO05D003602 8.5e-06 54.7 33 69.7
arahy.Tifrunner.gnm1.ann1.MGXB0Y Arachis hypogaea HOM05D003188 ORTHO05D003602 8.5e-06 54.7 33 69.7
CDE05G2945 Ceratophyllum demersum HOM05D003188 ORTHO05D003602 8.5e-06 54.7 33 72.7
Duzib138G0729 Durio zibethinus HOM05D003188 ORTHO05D003602 8.5e-06 54.7 33 72.7
Gohir.A11G155400 Gossypium hirsutum HOM05D003188 ORTHO05D003602 8.5e-06 54.7 33 72.7
Nn3g17701 Nelumbo nucifera HOM05D003188 ORTHO05D003602 8.5e-06 54.7 33 72.7
SHI18942 Sapria himalayana HOM05D003188 ORTHO05D003602 8.5e-06 54.7 33 75.8
SGA_v2.0_scaffold159G37605 Striga asiatica HOM05D003188 ORTHO05D003602 8.5e-06 54.7 33 75.8


User provided reference genes

Program Settings