Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B01739 Eucalyptus grandis HOM05D006926 ORTHO05D008863 3.1e-39 167.9 82 100.0
CiPaw.01G148200 Carya illinoinensis HOM05D006926 ORTHO05D008863 1.0e-26 126.3 78 70.5
Atru.chr4.2848 Acer truncatum HOM05D006926 ORTHO05D008863 3.1e-26 124.8 82 67.1
QL06p009008 Quercus lobata HOM05D006926 ORTHO05D008863 3.1e-26 124.8 81 69.1
PGR031G3585 Punica granatum HOM05D006926 ORTHO05D008863 1.5e-25 122.5 82 65.9
Cfa015391 Carpinus fangiana HOM05D006926 ORTHO05D008863 2.0e-25 122.1 81 67.9
Haze_01195 Corylus avellana HOM05D006926 ORTHO05D008863 2.0e-25 122.1 81 66.7
CSS0040550 Camellia sinensis var. sinensis HOM05D006926 ORTHO05D008863 5.8e-25 120.6 81 63.0
Actinidia40273 Actinidia chinensis HOM05D006926 ORTHO05D008863 7.5e-25 120.2 81 64.2
ClCG05G006130 Citrullus lanatus HOM05D006926 ORTHO05D008863 7.5e-25 120.2 78 66.7
Eucgr.C02193 Eucalyptus grandis HOM05D006926 ORTHO05D008863 7.5e-25 120.2 73 82.2
Thecc.04G285300 Theobroma cacao HOM05D006926 ORTHO05D008863 7.5e-25 120.2 81 64.2
Gohir.A09G238600 Gossypium hirsutum HOM05D006926 ORTHO05D008863 2.2e-24 118.6 81 59.3
Duzib151G0724 Durio zibethinus HOM05D006926 ORTHO05D008863 2.9e-24 118.2 81 63.0
LjContig00081g0009495 Lotus japonicus HOM05D006926 ORTHO05D008863 2.9e-24 118.2 80 62.5
Gohir.D09G239500 Gossypium hirsutum HOM05D006926 ORTHO05D008863 3.7e-24 117.9 81 59.3
Gorai.006G262300 Gossypium raimondii HOM05D006926 ORTHO05D008863 3.7e-24 117.9 81 59.3
CsaV3_3G014680 Cucumis sativus L. HOM05D006926 ORTHO05D008863 4.9e-24 117.5 78 66.7
CSS0048032 Camellia sinensis var. sinensis HOM05D006926 ORTHO05D008863 6.4e-24 117.1 82 63.4
FvH4_4g18230 Fragaria vesca HOM05D006926 ORTHO05D008863 6.4e-24 117.1 81 60.5
FAN12G2558 Fragaria x ananassa HOM05D006926 ORTHO05D008863 6.4e-24 117.1 81 60.5
FAN12G4333 Fragaria x ananassa HOM05D006926 ORTHO05D008863 6.4e-24 117.1 81 60.5
Sed0000576 Sechium edule HOM05D006926 ORTHO05D008863 1.1e-23 116.3 78 64.1
Glyma.02G298900 Glycine max HOM05D006926 ORTHO05D008863 3.2e-23 114.8 80 61.2
Cc01_g06580 Coffea canephora HOM05D006926 ORTHO05D008863 4.1e-23 114.4 75 68.0
FAN17G0573 Fragaria x ananassa HOM05D006926 ORTHO05D008863 4.1e-23 114.4 81 58.0
Cc00_g07570 Coffea canephora HOM05D006926 ORTHO05D008863 5.4e-23 114.0 75 68.0
COL.COLO4_13863 Corchorus olitorius HOM05D006926 ORTHO05D008863 9.2e-23 113.2 81 59.3
Manes.03G195800 Manihot esculenta HOM05D006926 ORTHO05D008863 1.2e-22 112.8 81 61.7
RcHm_v2.0_Chr4g0422371 Rosa chinensis HOM05D006926 ORTHO05D008863 1.2e-22 112.8 81 59.3
Lalb_Chr17g0348851 Lupinus albus HOM05D006926 ORTHO05D008863 1.6e-22 112.5 80 60.0
Nitab4.5_0005852g0010 Nicotiana tabacum HOM05D006926 ORTHO05D008863 1.6e-22 112.5 81 61.7
Rhsim04G0222900 Rhododendron simsii HOM05D006926 ORTHO05D008863 1.6e-22 112.5 81 56.8
Sp3g05870 Schrenkiella parvula HOM05D006926 ORTHO05D008863 1.6e-22 112.5 81 59.3
PGSC0003DMG400006295 Solanum tuberosum HOM05D006926 ORTHO05D008863 2.0e-22 112.1 81 63.0
Cpa.g.sc16.177 Carica papaya HOM05D006926 ORTHO05D008863 2.7e-22 111.7 81 61.7
Thhalv10020026m.g Eutrema salsugineum HOM05D006926 ORTHO05D008863 2.7e-22 111.7 81 58.0
Phvul.008G277600 Phaseolus vulgaris HOM05D006926 ORTHO05D008863 2.7e-22 111.7 80 58.8
Sopen01g030780 Solanum pennellii HOM05D006926 ORTHO05D008863 2.7e-22 111.7 81 63.0
Nitab4.5_0000059g0440 Nicotiana tabacum HOM05D006926 ORTHO05D008863 3.5e-22 111.3 81 61.7
THA.LOC104818923 Tarenaya hassleriana HOM05D006926 ORTHO05D008863 3.5e-22 111.3 81 60.5
THA.LOC104827343 Tarenaya hassleriana HOM05D006926 ORTHO05D008863 3.5e-22 111.3 81 60.5
HanXRQChr05g0150001 Helianthus annuus HOM05D006926 ORTHO05D008863 4.6e-22 110.9 78 59.0
Peaxi162Scf01123g00213 Petunia axillaris HOM05D006926 ORTHO05D008863 4.6e-22 110.9 81 64.2
Psat2g008440 Pisum sativum HOM05D006926 ORTHO05D008863 4.6e-22 110.9 80 58.8
MD08G1066700 Malus domestica HOM05D006926 ORTHO05D008863 6.0e-22 110.5 81 59.3
Solyc01g080720.4 Solanum lycopersicum HOM05D006926 ORTHO05D008863 6.0e-22 110.5 81 63.0
vmacro08158 Vaccinium macrocarpon HOM05D006926 ORTHO05D008863 6.0e-22 110.5 81 56.8
AUR62035127 Chenopodium quinoa HOM05D006926 ORTHO05D008863 7.8e-22 110.2 81 58.0
Lj9C380T3 Lonicera japonica HOM05D006926 ORTHO05D008863 7.8e-22 110.2 78 64.1
Prupe.1G135500 Prunus persica HOM05D006926 ORTHO05D008863 7.8e-22 110.2 81 59.3
Sabra10G0009000 Salix brachista HOM05D006926 ORTHO05D008863 7.8e-22 110.2 81 61.7
Ah.00g000960 Amaranthus hybridus HOM05D006926 ORTHO05D008863 1.3e-21 109.4 81 53.1
Potri.010G014100 Populus trichocarpa HOM05D006926 ORTHO05D008863 1.7e-21 109.0 81 60.5
Aa31LG5G17490 Aethionema arabicum HOM05D006926 ORTHO05D008863 2.3e-21 108.6 81 56.8
AUR62040613 Chenopodium quinoa HOM05D006926 ORTHO05D008863 2.3e-21 108.6 81 56.8
ECA233G5048 Erigeron canadensis HOM05D006926 ORTHO05D008863 2.3e-21 108.6 78 57.7
Oeu029705.1 Olea europaea HOM05D006926 ORTHO05D008863 2.3e-21 108.6 79 60.8
TAR365G0466 Trochodendron aralioides HOM05D006926 ORTHO05D008863 2.3e-21 108.6 78 62.8
CARHR081530 Cardamine hirsuta HOM05D006926 ORTHO05D008863 3.0e-21 108.2 81 56.8
arahy.Tifrunner.gnm1.ann1.R7Y0VJ Arachis hypogaea HOM05D006926 ORTHO05D008863 3.9e-21 107.8 79 60.8
VMungo0647G0525 Vigna mungo HOM05D006926 ORTHO05D008863 3.9e-21 107.8 80 58.8
Ca_06384_v3 Cicer arietinum L. HOM05D006926 ORTHO05D008863 5.0e-21 107.5 79 59.5
Ca_29965_v3 Cicer arietinum L. HOM05D006926 ORTHO05D008863 5.0e-21 107.5 79 59.5
CAN.G185.37 Capsicum annuum HOM05D006926 ORTHO05D008863 6.6e-21 107.1 81 59.3
Lalb_Chr10g0107371 Lupinus albus HOM05D006926 ORTHO05D008863 6.6e-21 107.1 80 56.2
Medtr5g095130 Medicago truncatula HOM05D006926 ORTHO05D008863 6.6e-21 107.1 80 57.5
DCAR_006643 Daucus carota HOM05D006926 ORTHO05D008863 8.6e-21 106.7 82 56.1
AL159U10010 Arabidopsis lyrata HOM05D006926 ORTHO05D008863 1.5e-20 105.9 81 54.3
AL3G18040 Arabidopsis lyrata HOM05D006926 ORTHO05D008863 1.5e-20 105.9 81 54.3
AL3G18070 Arabidopsis lyrata HOM05D006926 ORTHO05D008863 1.5e-20 105.9 81 54.3
AL3G18090 Arabidopsis lyrata HOM05D006926 ORTHO05D008863 1.5e-20 105.9 81 54.3
AT3G06920 Arabidopsis thaliana HOM05D006926 ORTHO05D008863 1.9e-20 105.5 81 54.3
Hund12224 Selenicereus undatus HOM05D006926 ORTHO05D008863 2.5e-20 105.1 81 55.6
EL10Ac1g01925 Beta vulgaris HOM05D006926 ORTHO05D008863 3.3e-20 104.8 81 49.4
Sc10g0006430 Simmondsia chinensis HOM05D006926 ORTHO05D008863 3.3e-20 104.8 81 54.3
arahy.Tifrunner.gnm1.ann1.DI2NU4 Arachis hypogaea HOM05D006926 ORTHO05D008863 4.3e-20 104.4 79 59.5
Nn1g09562 Nelumbo nucifera HOM05D006926 ORTHO05D008863 9.5e-20 103.2 77 54.5
TWI09G0560 Tripterygium wilfordii HOM05D006926 ORTHO05D008863 9.5e-20 103.2 81 55.6
A03p34960 Brassica napus HOM05D006926 ORTHO05D008863 2.8e-19 101.7 81 50.6
SGA_v2.0_scaffold67G22630 Striga asiatica HOM05D006926 ORTHO05D008863 3.6e-19 101.3 81 58.0
MBI01_g30450_MAGBIO Magnolia biondii HOM05D006926 ORTHO05D008863 4.7e-19 100.9 78 56.4
BolC3t16524H Brassica oleracea HOM05D006926 ORTHO05D008863 6.2e-19 100.5 81 49.4
TPR.G14143 Trifolium pratense HOM05D006926 ORTHO05D008863 6.2e-19 100.5 80 51.2
C03p42540 Brassica napus HOM05D006926 ORTHO05D008863 8.1e-19 100.1 81 49.4
BraA03t12676Z Brassica rapa HOM05D006926 ORTHO05D008863 8.1e-19 100.1 81 49.4
CANSAT78G1021 Cannabis sativa HOM05D006926 ORTHO05D008863 1.8e-18 99.0 81 54.3
TPR.G14145 Trifolium pratense HOM05D006926 ORTHO05D008863 2.3e-18 98.6 80 51.2
MSTRG.10097 Avicennia marina HOM05D006926 ORTHO05D008863 4.0e-18 97.8 81 56.8
Aqoxy5G00729 Aquilegia oxysepala HOM05D004412 ORTHO05D005316 5.2e-18 97.4 81 49.4
Nn6g34671 Nelumbo nucifera HOM05D006926 ORTHO05D008863 5.2e-18 97.4 81 51.9
SHI00269 Sapria himalayana HOM05D006926 ORTHO05D008863 8.9e-18 96.7 81 53.1
PSO302G0177 Papaver somniferum HOM05D006926 ORTHO05D008863 1.5e-17 95.9 80 57.5
SalBow1G7679 Salvia bowleyana HOM05D006926 ORTHO05D008863 2.0e-17 95.5 81 53.1
Nn2g14325 Nelumbo nucifera HOM05D006926 ORTHO05D008863 2.9e-16 91.7 81 49.4
Migut.G00155 Erythranthe guttata HOM05D006926 ORTHO05D008863 4.1e-15 87.8 79 49.4
ATR0796G196 Amborella trichopoda HOM05D006926 ORTHO05D008863 7.1e-15 87.0 76 50.0
HPP92_015997 Vanilla planifolia HOM05D006926 ORTHO05D008863 3.0e-13 81.6 82 47.6
CDE11G0294 Ceratophyllum demersum HOM05D006926 ORTHO05D008863 4.4e-09 67.8 77 35.1
Dinv26449 Davidia involucrata HOM05D006926 ORTHO05D008863 4.6e-06 57.8 38 65.8


User provided reference genes

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