Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B01566 Eucalyptus grandis HOM05D006747 ORTHO05D008384 1.3e-147 526.6 310 100.0
GSVIVG01028355001 Vitis vinifera HOM05D006747 ORTHO05D008384 5.1e-107 391.7 238 80.7
Atru.chr5.1716 Acer truncatum HOM05D006747 ORTHO05D008384 1.1e-106 390.6 240 80.0
Thecc.01G256100 Theobroma cacao HOM05D006747 ORTHO05D008384 9.7e-106 387.5 240 78.3
Ciclev10021655m.g Citrus clementina HOM05D006747 ORTHO05D008384 1.6e-105 386.7 238 80.3
Dinv22393 Davidia involucrata HOM05D006747 ORTHO05D008384 2.2e-105 386.3 252 76.6
Cfa002442 Carpinus fangiana HOM05D006747 ORTHO05D008384 1.1e-104 384.0 238 78.6
Duzib138G0743 Durio zibethinus HOM05D006747 ORTHO05D008384 2.2e-102 376.3 240 76.2
Potri.005G225900 Populus trichocarpa HOM05D006747 ORTHO05D008384 2.2e-102 376.3 247 76.5
Sabra05G0174300 Salix brachista HOM05D006747 ORTHO05D008384 2.2e-102 376.3 247 76.1
Gorai.007G147500 Gossypium raimondii HOM05D006747 ORTHO05D008384 3.8e-102 375.6 240 77.1
MD05G1195200 Malus domestica HOM05D006747 ORTHO05D008384 5.0e-102 375.2 238 76.1
arahy.Tifrunner.gnm1.ann1.EQ4JVG Arachis hypogaea HOM05D006747 ORTHO05D008384 6.5e-102 374.8 243 77.0
Gohir.D11G137550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 6.5e-102 374.8 240 77.1
TPR.G35130 Trifolium pratense HOM05D006747 ORTHO05D008384 8.5e-102 374.4 240 75.4
arahy.Tifrunner.gnm1.ann1.0525TE Arachis hypogaea HOM05D006747 ORTHO05D008384 1.1e-101 374.0 243 76.5
PGR031G3840 Punica granatum HOM05D006747 ORTHO05D008384 1.1e-101 374.0 221 81.0
Lj5g0027576 Lotus japonicus HOM05D006747 ORTHO05D008384 1.4e-101 373.6 243 74.9
Psat6g054040 Pisum sativum HOM05D006747 ORTHO05D008384 2.5e-101 372.9 240 75.8
Gohir.A11G131500 Gossypium hirsutum HOM05D006747 ORTHO05D008384 3.2e-101 372.5 240 76.7
RcHm_v2.0_Chr6g0287851 Rosa chinensis HOM05D006747 ORTHO05D008384 1.2e-100 370.5 239 77.0
CSS0000886 Camellia sinensis var. sinensis HOM05D006747 ORTHO05D008384 1.6e-100 370.2 230 78.7
Haze_24648 Corylus avellana HOM05D006747 ORTHO05D008384 3.6e-100 369.0 269 70.3
Medtr1g069790 Medicago truncatula HOM05D006747 ORTHO05D008384 4.6e-100 368.6 240 74.6
Rhsim13G0036000 Rhododendron simsii HOM05D006747 ORTHO05D008384 1.0e-99 367.5 236 76.3
Cc01_g18210 Coffea canephora HOM05D006747 ORTHO05D008384 2.3e-99 366.3 245 73.9
Migut.D00438 Erythranthe guttata HOM05D006747 ORTHO05D008384 2.3e-99 366.3 236 74.2
TAR362G0605 Trochodendron aralioides HOM05D006747 ORTHO05D008384 2.3e-99 366.3 238 75.6
Phvul.007G192000 Phaseolus vulgaris HOM05D006747 ORTHO05D008384 3.0e-99 365.9 238 76.1
Peaxi162Scf00987g00036 Petunia axillaris HOM05D006747 ORTHO05D008384 3.9e-99 365.5 245 73.1
FAN20G2892 Fragaria x ananassa HOM05D006747 ORTHO05D008384 5.1e-99 365.2 239 76.2
Glyma.06G315300 Glycine max HOM05D006747 ORTHO05D008384 6.7e-99 364.8 251 72.5
VMungo0720G1324 Vigna mungo HOM05D006747 ORTHO05D008384 8.7e-99 364.4 243 73.7
CANSAT01G1212 Cannabis sativa HOM05D006747 ORTHO05D008384 1.1e-98 364.0 237 73.4
FAN15G1911 Fragaria x ananassa HOM05D006747 ORTHO05D008384 1.1e-98 364.0 239 76.2
Carub.0003s3494 Capsella rubella HOM05D006747 ORTHO05D008384 1.5e-98 363.6 249 72.3
FAN27G0389 Fragaria x ananassa HOM05D006747 ORTHO05D008384 1.5e-98 363.6 239 76.6
AL3G53500 Arabidopsis lyrata HOM05D006747 ORTHO05D008384 4.3e-98 362.1 237 75.5
Sp3g33710 Schrenkiella parvula HOM05D006747 ORTHO05D008384 4.3e-98 362.1 238 73.1
Thhalv10002060m.g Eutrema salsugineum HOM05D006747 ORTHO05D008384 7.4e-98 361.3 238 73.5
Solyc06g008350.3 Solanum lycopersicum HOM05D006747 ORTHO05D008384 9.7e-98 360.9 238 74.8
Sopen06g003200 Solanum pennellii HOM05D006747 ORTHO05D008384 9.7e-98 360.9 238 74.8
Lalb_Chr06g0170541 Lupinus albus HOM05D006747 ORTHO05D008384 1.3e-97 360.5 238 73.5
AT2G20495 Arabidopsis thaliana HOM05D006747 ORTHO05D008384 3.7e-97 359.0 249 72.7
PGSC0003DMG400025504 Solanum tuberosum HOM05D006747 ORTHO05D008384 6.3e-97 358.2 238 74.8
Actinidia30159 Actinidia chinensis HOM05D006747 ORTHO05D008384 8.2e-97 357.8 238 74.4
BraA07t27816Z Brassica rapa HOM05D006747 ORTHO05D008384 1.1e-96 357.5 238 72.7
COL.COLO4_04026 Corchorus olitorius HOM05D006747 ORTHO05D008384 1.8e-96 356.7 273 67.4
Aqoxy2G03665 Aquilegia oxysepala HOM05D006747 ORTHO05D008384 2.4e-96 356.3 240 71.2
MBI07_g16913_MAGBIO Magnolia biondii HOM05D006747 ORTHO05D008384 2.4e-96 356.3 234 73.1
Manes.12G033600 Manihot esculenta HOM05D006747 ORTHO05D008384 2.4e-96 356.3 226 77.4
SalBow4G0984 Salvia bowleyana HOM05D006747 ORTHO05D008384 4.1e-96 355.5 240 72.9
CiPaw.03G265900 Carya illinoinensis HOM05D006747 ORTHO05D008384 6.9e-96 354.8 252 71.8
MSTRG.21486 Avicennia marina HOM05D006747 ORTHO05D008384 9.1e-96 354.4 240 73.8
DCAR_012556 Daucus carota HOM05D006747 ORTHO05D008384 1.2e-95 354.0 245 70.2
BcaC06g36739 Brassica carinata HOM05D006747 ORTHO05D008384 3.4e-95 352.4 238 71.4
Lsat_1_v5_gn_5_182940 Lactuca sativa HOM05D006747 ORTHO05D008384 3.4e-95 352.4 240 70.4
CARHR111050 Cardamine hirsuta HOM05D006747 ORTHO05D008384 4.5e-95 352.1 237 72.6
SGA_v2.0_scaffold138G35213 Striga asiatica HOM05D006747 ORTHO05D008384 1.3e-94 350.5 251 69.7
C07p00520 Brassica napus HOM05D006747 ORTHO05D008384 1.7e-94 350.1 238 71.0
HanXRQChr09g0254271 Helianthus annuus HOM05D006747 ORTHO05D008384 1.7e-94 350.1 237 73.0
PSO063G2179 Papaver somniferum HOM05D006747 ORTHO05D008384 2.2e-94 349.7 238 71.4
ATR0736G001 Amborella trichopoda HOM05D006747 ORTHO05D008384 3.8e-94 349.0 237 70.5
THA.LOC104804045 Tarenaya hassleriana HOM05D006747 ORTHO05D008384 5.0e-94 348.6 253 68.8
BolC7t40498H Brassica oleracea HOM05D006747 ORTHO05D008384 8.5e-94 347.8 239 71.1
vmacro02672 Vaccinium macrocarpon HOM05D006747 ORTHO05D008384 5.5e-93 345.1 287 62.7
Aa31LG8G17440 Aethionema arabicum HOM05D006747 ORTHO05D008384 1.2e-92 344.0 256 66.8
BcaB03g16845 Brassica carinata HOM05D006747 ORTHO05D008384 6.1e-92 341.7 239 69.0
CDE06G1525 Ceratophyllum demersum HOM05D006747 ORTHO05D008384 5.1e-91 338.6 238 70.6
EL10As5g23483 Beta vulgaris HOM05D006747 ORTHO05D008384 6.7e-91 338.2 246 66.3
CsaV3_7G027040 Cucumis sativus L. HOM05D006747 ORTHO05D008384 6.7e-91 338.2 236 67.8
MELO3C012750.2 Cucumis melo HOM05D006747 ORTHO05D008384 1.3e-89 334.0 236 66.9
Lj1C68G8 Lonicera japonica HOM05D003718 ORTHO05D004402 2.2e-89 333.2 212 75.5
AUR62011854 Chenopodium quinoa HOM05D006747 ORTHO05D008384 4.8e-89 332.0 228 69.3
unitig_8.g3882 Utricularia gibba HOM05D006747 ORTHO05D008384 6.9e-88 328.2 237 68.8
Os07g0458800 Oryza sativa ssp. japonica HOM05D006747 ORTHO05D008384 5.9e-87 325.1 244 63.9
Prupe.8G221800 Prunus persica HOM05D006747 ORTHO05D008384 1.7e-86 323.6 239 69.9
Sc17g0000600 Simmondsia chinensis HOM05D006747 ORTHO05D008384 1.7e-86 323.6 211 73.9
FAN24G2059 Fragaria x ananassa HOM05D006747 ORTHO05D008384 1.6e-84 317.0 239 69.5
Zm00001eb384950 Zea mays HOM05D006747 ORTHO05D008384 1.1e-82 310.8 238 61.8
AUR62024699 Chenopodium quinoa HOM05D006747 ORTHO05D008384 7.4e-82 308.1 211 67.8
CAN.G941.16 Capsicum annuum HOM05D006747 ORTHO05D008384 1.7e-81 307.0 210 71.9
A07p00240 Brassica napus HOM05D006747 ORTHO05D008384 4.8e-81 305.4 238 65.5
HPP92_014756 Vanilla planifolia HOM05D006747 ORTHO05D008384 6.3e-81 305.1 212 66.5
Nn1g02801 Nelumbo nucifera HOM05D006747 ORTHO05D008384 1.0e-78 297.7 238 65.1
Hma1.2p1_0273F.1_g109550 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 4.2e-77 292.4 189 76.2
ECA248G1486 Erigeron canadensis HOM05D006747 ORTHO05D008384 5.5e-77 292.0 240 64.6
PSO017G5775 Papaver somniferum HOM05D006747 ORTHO05D008384 2.2e-73 280.0 238 61.8
ClCG09G008030 Citrullus lanatus HOM05D006747 ORTHO05D008384 1.6e-71 273.9 408 40.4
Oeu035736.1 Olea europaea HOM05D006747 ORTHO05D008384 2.2e-70 270.0 175 74.3
AagrBONN_evm.TU.Sc2ySwM_228.388 Anthoceros agrestis HOM05D006747 ORTHO05D008384 7.2e-69 265.0 232 56.0
Mapoly0024s0028 Marchantia polymorpha HOM05D006747 ORTHO05D008384 3.0e-67 259.6 231 55.8
Pp3c11_10320 Physcomitrium patens HOM05D006747 ORTHO05D008384 1.5e-66 257.3 242 52.5
Nitab4.5_0005593g0070 Nicotiana tabacum HOM05D006747 ORTHO05D008384 1.8e-64 250.4 211 60.7
HPP92_028089 Vanilla planifolia HOM05D006747 ORTHO05D008384 3.1e-64 249.6 171 66.7
Nitab4.5_0000326g0130 Nicotiana tabacum HOM05D006747 ORTHO05D008384 2.0e-63 246.9 238 56.3
SMO115G0001 Selaginella moellendorffii HOM05D006747 ORTHO05D008384 4.9e-57 225.7 229 51.5
QL09p039580 Quercus lobata HOM05D006747 ORTHO05D008384 8.3e-57 224.9 155 72.9
Sed0026822 Sechium edule HOM05D006747 ORTHO05D008384 1.6e-52 210.7 153 68.0
Ca_09674_v3 Cicer arietinum L. HOM05D006747 ORTHO05D008384 8.6e-46 188.3 130 70.0
FvH4_2g21270 Fragaria vesca HOM05D006747 ORTHO05D008384 8.9e-43 178.3 128 71.9
QL09p039572 Quercus lobata HOM05D006747 ORTHO05D008384 8.1e-36 155.2 88 83.0
SEGI_35883 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 1.7e-30 137.5 89 70.8
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 4.1e-24 116.3 73 71.2
SEGI_30594 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 1.7e-22 110.9 96 54.2
Hma1.2p1_0273F.1_g109560 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 1.6e-20 104.4 74 64.9
arahy.Tifrunner.gnm1.ann1.K1LLW7 Arachis hypogaea HOM05D006747 ORTHO05D008384 4.0e-19 99.8 58 82.8
Cpa.g.sc165.14 Carica papaya HOM05D006747 ORTHO05D008384 2.7e-15 87.0 54 83.3
MD10G1182200 Malus domestica HOM05D006747 ORTHO05D008384 3.5e-15 86.7 70 64.3
Actinidia34415 Actinidia chinensis HOM05D006747 ORTHO05D008384 3.9e-14 83.2 56 69.6
SEGI_37670 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 7.3e-13 79.0 55 69.1
Actinidia34401 Actinidia chinensis HOM05D006747 ORTHO05D008384 9.6e-13 78.6 53 69.8
Duzib133G0415 Durio zibethinus HOM05D006747 ORTHO05D008384 9.6e-13 78.6 48 79.2
Gohir.A07G213740 Gossypium hirsutum HOM05D006747 ORTHO05D008384 1.4e-11 74.7 153 34.0
Gohir.A07G149550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 5.8e-10 69.3 87 48.3
Cre07.g348951 Chlamydomonas reinhardtii HOM05D006747 ORTHO05D008384 3.5e-07 60.1 98 30.6


User provided reference genes

Program Settings