Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B01489 Eucalyptus grandis HOM05D000002 ORTHO05D000001 7.2e-55 216.9 99 100.0
Rhsim10G0154200 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.1e-09 65.9 83 41.0
Rhsim09G0133900 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.5e-09 65.1 83 41.0
Rhsim10G0050800 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.5e-09 65.1 83 41.0
Rhsim10G0164600 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.5e-09 65.1 83 41.0
RhsimUnG0064500 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.5e-09 65.1 83 41.0
FvH4_6g21377 Fragaria vesca HOM05D000002 ORTHO05D000001 4.6e-09 64.7 81 39.5
EL10Ac5g11625 Beta vulgaris HOM05D000002 ORTHO05D000001 1.0e-08 63.5 81 37.0
EL10Ac7g17284 Beta vulgaris HOM05D000002 ORTHO05D000001 1.0e-08 63.5 81 37.0
RhsimUnG0150200 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.7e-08 62.8 83 39.8
Ca_03621_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.3e-08 62.4 82 40.2
Rhsim05G0201800 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.3e-08 62.4 83 38.6
EL10Ac6g13350 Beta vulgaris HOM05D000002 ORTHO05D000001 3.9e-08 61.6 81 35.8
FvH4_3g20503 Fragaria vesca HOM05D000002 ORTHO05D000001 5.1e-08 61.2 86 40.7
Rhsim05G0092400 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.1e-08 61.2 81 37.0
FvH4_4g14721 Fragaria vesca HOM05D000002 ORTHO05D000001 8.6e-08 60.5 81 40.7
EL10Ac6g13881 Beta vulgaris HOM05D000002 ORTHO05D000001 1.1e-07 60.1 81 34.6
MSTRG.5642 Avicennia marina HOM05D000002 ORTHO05D000001 1.5e-07 59.7 81 40.7
Rhsim01G0160700 Rhododendron simsii HOM05D000559 ORTHO05D000001 1.9e-07 59.3 81 35.8
ECA248G2857 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-07 58.9 90 32.2
FvH4_1g10046 Fragaria vesca HOM05D000002 ORTHO05D000001 3.3e-07 58.5 75 42.7
CANSAT25G2321 Cannabis sativa HOM05D000002 ORTHO05D000001 7.3e-07 57.4 77 35.1
Sopen01g026120 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-07 57.4 87 34.5
Sopen01g030020 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-07 57.4 87 34.5
Sopen01g042300 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-07 57.4 87 34.5
Sopen03g011940 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-07 57.4 87 34.5
Sopen05g025670 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-07 57.4 87 34.5
Sopen05g027760 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-07 57.4 87 34.5
Sopen05g030340 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-07 57.4 87 34.5
Sopen06g018130 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-07 57.4 87 34.5
Sopen08g010410 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-07 57.4 87 34.5
Sopen12g010360 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-07 57.4 87 34.5
Sopen12g019780 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-07 57.4 87 34.5
RcHm_v2.0_Chr1g0381111 Rosa chinensis HOM05D000002 ORTHO05D000001 9.5e-07 57.0 81 37.0
FvH4_7g22584 Fragaria vesca HOM05D000002 ORTHO05D000001 1.2e-06 56.6 83 34.9
Rhsim11G0162300 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.2e-06 56.6 86 40.7
SHI52671 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-06 55.8 78 33.3
EL10Ac7g17311 Beta vulgaris HOM05D000002 ORTHO05D000001 2.8e-06 55.5 85 32.9
Rhsim03G0193900 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.6e-06 55.1 82 41.5
Sopen02g009570 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.1 81 34.6
CSS0038878 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.7e-06 54.7 75 38.7
HanXRQChr13g0415071 Helianthus annuus HOM05D000002 ORTHO05D000001 4.7e-06 54.7 82 31.7
SHI50152 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.7 82 31.7
SHI53840 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.7 82 32.9
Ca_26532_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.2e-06 54.3 84 34.5
Thhalv10000595m.g Eutrema salsugineum HOM05D000002 ORTHO05D000001 6.2e-06 54.3 80 38.8


User provided reference genes

Program Settings