Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B01421 Eucalyptus grandis HOM05D006840 ORTHO05D008588 4.6e-169 597.8 306 100.0
Potri.013G085300 Populus trichocarpa HOM05D006840 ORTHO05D008588 3.1e-120 435.6 305 73.4
Manes.13G004800 Manihot esculenta HOM05D006840 ORTHO05D008588 4.0e-120 435.3 303 74.3
CiPaw.08G114500 Carya illinoinensis HOM05D006840 ORTHO05D008588 5.8e-119 431.4 309 73.5
Sabra13G0078300 Salix brachista HOM05D006840 ORTHO05D008588 1.3e-118 430.3 306 72.5
QL01p049413 Quercus lobata HOM05D006840 ORTHO05D008588 1.9e-117 426.4 302 71.9
PGR119G2059 Punica granatum HOM05D006840 ORTHO05D008588 2.7e-116 422.5 314 71.0
Rhsim06G0181200 Rhododendron simsii HOM05D006840 ORTHO05D008588 6.0e-116 421.4 307 72.3
Duzib106G1767 Durio zibethinus HOM05D006840 ORTHO05D008588 3.0e-115 419.1 305 72.5
GSVIVG01019072001 Vitis vinifera HOM05D006840 ORTHO05D008588 1.1e-114 417.2 262 80.2
CSS0048734 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 1.2e-113 413.7 281 74.0
Gohir.D08G247000 Gossypium hirsutum HOM05D006840 ORTHO05D008588 1.6e-113 413.3 297 72.7
Lj1g0027213 Lotus japonicus HOM05D006840 ORTHO05D008588 1.1e-112 410.6 311 69.5
Gohir.A08G226600 Gossypium hirsutum HOM05D006840 ORTHO05D008588 4.0e-112 408.7 309 71.5
Peaxi162Scf00529g00710 Petunia axillaris HOM05D006840 ORTHO05D008588 3.4e-111 405.6 262 76.3
EL10Ac4g09995 Beta vulgaris HOM05D006840 ORTHO05D008588 6.4e-110 401.4 304 68.1
TWI75G0198 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 6.4e-110 401.4 306 68.3
vmacro12041 Vaccinium macrocarpon HOM05D006840 ORTHO05D008588 6.4e-110 401.4 269 75.1
TWI36G0520 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 1.1e-109 400.6 284 70.4
Gorai.004G263500 Gossypium raimondii HOM05D006840 ORTHO05D008588 1.4e-109 400.2 322 67.1
arahy.Tifrunner.gnm1.ann1.SXK3FV Arachis hypogaea HOM05D006840 ORTHO05D008588 1.9e-109 399.8 257 77.4
Glyma.09G249400 Glycine max HOM05D006840 ORTHO05D008588 1.9e-109 399.8 313 69.6
AUR62006644 Chenopodium quinoa HOM05D006840 ORTHO05D008588 2.4e-109 399.4 257 76.7
AUR62000298 Chenopodium quinoa HOM05D006840 ORTHO05D008588 3.2e-109 399.1 300 70.3
Glyma.18G243000 Glycine max HOM05D006840 ORTHO05D008588 7.0e-109 397.9 313 69.6
RcHm_v2.0_Chr3g0447741 Rosa chinensis HOM05D006840 ORTHO05D008588 7.0e-109 397.9 279 71.7
Atru.BG.274.p Acer truncatum HOM05D006840 ORTHO05D008588 1.2e-108 397.1 235 81.7
CANSAT54G1191 Cannabis sativa HOM05D006840 ORTHO05D008588 2.7e-108 396.0 278 72.3
TPR.G23771 Trifolium pratense HOM05D006840 ORTHO05D008588 3.5e-108 395.6 261 76.6
Nitab4.5_0000083g0050 Nicotiana tabacum HOM05D006840 ORTHO05D008588 1.0e-107 394.0 260 73.8
Psat3g102720 Pisum sativum HOM05D006840 ORTHO05D008588 1.7e-107 393.3 308 68.8
Lj1A575G23 Lonicera japonica HOM05D006840 ORTHO05D008588 3.9e-107 392.1 254 74.8
Prupe.6G362300 Prunus persica HOM05D006840 ORTHO05D008588 1.5e-106 390.2 262 72.5
Sc06g0005020 Simmondsia chinensis HOM05D006840 ORTHO05D008588 1.5e-106 390.2 266 73.7
Phvul.008G053500 Phaseolus vulgaris HOM05D006840 ORTHO05D008588 1.9e-106 389.8 260 74.6
Nitab4.5_0009290g0020 Nicotiana tabacum HOM05D006840 ORTHO05D008588 3.3e-106 389.0 272 70.6
ECA232G2794 Erigeron canadensis HOM05D006840 ORTHO05D008588 7.3e-106 387.9 306 65.0
FvH4_6g00410 Fragaria vesca HOM05D006840 ORTHO05D008588 2.1e-105 386.3 270 71.1
Migut.F02113 Erythranthe guttata HOM05D006840 ORTHO05D008588 2.8e-105 386.0 259 71.8
Lsat_1_v5_gn_0_18400 Lactuca sativa HOM05D006840 ORTHO05D008588 4.7e-105 385.2 257 73.2
FAN09G3232 Fragaria x ananassa HOM05D006840 ORTHO05D008588 8.1e-105 384.4 270 70.7
HanXRQChr15g0492181 Helianthus annuus HOM05D006840 ORTHO05D008588 8.1e-105 384.4 258 72.5
MD12G1264100 Malus domestica HOM05D006840 ORTHO05D008588 1.4e-104 383.6 262 73.7
arahy.Tifrunner.gnm1.ann1.1ED5VS Arachis hypogaea HOM05D006840 ORTHO05D008588 1.8e-104 383.3 257 75.1
Lalb_Chr03g0038681 Lupinus albus HOM05D006840 ORTHO05D008588 1.8e-104 383.3 304 67.4
ATR0215G001 Amborella trichopoda HOM05D006840 ORTHO05D008588 5.2e-104 381.7 294 66.0
PGSC0003DMG400010521 Solanum tuberosum HOM05D006840 ORTHO05D008588 5.2e-104 381.7 261 73.2
MSTRG.27397 Avicennia marina HOM05D006840 ORTHO05D008588 1.2e-103 380.6 293 66.9
CAN.G642.5 Capsicum annuum HOM05D006840 ORTHO05D008588 1.5e-103 380.2 270 69.6
MELO3C010008.2 Cucumis melo HOM05D006840 ORTHO05D008588 2.0e-103 379.8 265 69.8
PSO357G0633 Papaver somniferum HOM05D006840 ORTHO05D008588 2.0e-103 379.8 277 70.0
CSS0032443 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 3.4e-103 379.0 232 80.2
Solyc04g056580.3 Solanum lycopersicum HOM05D006840 ORTHO05D008588 4.4e-103 378.6 261 72.4
Cc09_g03780 Coffea canephora HOM05D006840 ORTHO05D008588 7.5e-103 377.9 307 66.1
Oeu020467.1 Olea europaea HOM05D006840 ORTHO05D008588 1.3e-102 377.1 227 81.1
VMungo1383G2163 Vigna mungo HOM05D006840 ORTHO05D008588 1.7e-102 376.7 261 73.2
Sopen04g025500 Solanum pennellii HOM05D006840 ORTHO05D008588 2.2e-102 376.3 261 72.4
CsaV3_1G044150 Cucumis sativus L. HOM05D006840 ORTHO05D008588 3.7e-102 375.6 307 62.9
SGA_v2.0_scaffold62G21495 Striga asiatica HOM05D006840 ORTHO05D008588 1.9e-101 373.2 257 71.2
PSO170G0121 Papaver somniferum HOM05D006840 ORTHO05D008588 2.4e-101 372.9 284 66.5
DCAR_028385 Daucus carota HOM05D006840 ORTHO05D008588 3.2e-101 372.5 287 66.9
Hund21908 Selenicereus undatus HOM05D006840 ORTHO05D008588 3.2e-101 372.5 324 60.8
THA.LOC104821923 Tarenaya hassleriana HOM05D006840 ORTHO05D008588 3.2e-101 372.5 258 71.3
MD04G1245900 Malus domestica HOM05D006840 ORTHO05D008588 5.4e-101 371.7 247 74.1
Medtr7g080220 Medicago truncatula HOM05D006840 ORTHO05D008588 5.4e-101 371.7 279 71.0
HanXRQChr15g0491491 Helianthus annuus HOM05D006840 ORTHO05D008588 2.7e-100 369.4 257 70.4
Thecc.05G192600 Theobroma cacao HOM05D006840 ORTHO05D008588 1.3e-99 367.1 281 67.3
Carub.0002s1076 Capsella rubella HOM05D006840 ORTHO05D008588 1.7e-99 366.7 261 70.1
AL2G20230 Arabidopsis lyrata HOM05D006840 ORTHO05D008588 3.0e-99 365.9 253 72.3
AT1G65230 Arabidopsis thaliana HOM05D006840 ORTHO05D008588 5.1e-99 365.2 266 68.8
ClCG03G011690 Citrullus lanatus HOM05D006840 ORTHO05D008588 3.3e-98 362.5 285 63.9
Haze_04572 Corylus avellana HOM05D006840 ORTHO05D008588 7.3e-98 361.3 266 70.7
Dinv29090 Davidia involucrata HOM05D006840 ORTHO05D008588 2.8e-97 359.4 233 76.0
Sed0002286 Sechium edule HOM05D006840 ORTHO05D008588 2.4e-96 356.3 261 66.3
Thhalv10018969m.g Eutrema salsugineum HOM05D006840 ORTHO05D008588 3.1e-96 355.9 266 67.7
Aa31LG2G2360 Aethionema arabicum HOM05D006840 ORTHO05D008588 4.0e-96 355.5 258 68.6
Os01g0912700 Oryza sativa ssp. japonica HOM05D006840 ORTHO05D008588 5.2e-96 355.1 309 63.1
BcaC03g14685 Brassica carinata HOM05D006840 ORTHO05D008588 1.2e-95 354.0 258 68.6
Cfa006254 Carpinus fangiana HOM05D006840 ORTHO05D008588 1.2e-95 354.0 225 76.4
Ciclev10013335m.g Citrus clementina HOM05D006840 ORTHO05D008588 1.5e-95 353.6 310 63.5
BolC2t08265H Brassica oleracea HOM05D006840 ORTHO05D008588 2.0e-95 353.2 258 68.6
SalBow1G4059 Salvia bowleyana HOM05D006840 ORTHO05D008588 4.4e-95 352.1 226 72.6
A02p13110 Brassica napus HOM05D006840 ORTHO05D008588 7.6e-95 351.3 255 68.6
BraA02t06367Z Brassica rapa HOM05D006840 ORTHO05D008588 7.6e-95 351.3 255 68.6
BcaB05g24097 Brassica carinata HOM05D006840 ORTHO05D008588 1.3e-94 350.5 255 68.2
CARHR056840 Cardamine hirsuta HOM05D006840 ORTHO05D008588 1.7e-94 350.1 267 66.3
C02p21250 Brassica napus HOM05D006840 ORTHO05D008588 6.4e-94 348.2 256 68.0
HPP92_000447 Vanilla planifolia HOM05D006840 ORTHO05D008588 8.4e-94 347.8 259 66.0
Nn7g37259 Nelumbo nucifera HOM05D006840 ORTHO05D008588 2.4e-93 346.3 311 60.5
Aqoxy5G00025 Aquilegia oxysepala HOM05D006840 ORTHO05D008588 4.6e-92 342.0 220 74.1
Ca_07995_v3 Cicer arietinum L. HOM05D006840 ORTHO05D008588 6.0e-92 341.7 242 72.3
FAN02G1048 Fragaria x ananassa HOM05D006840 ORTHO05D008588 6.0e-92 341.7 249 69.1
FAN05G5535 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.0e-91 340.9 249 68.7
Sp5g19910 Schrenkiella parvula HOM05D006840 ORTHO05D008588 3.9e-91 339.0 266 66.5
FAN14G4782 Fragaria x ananassa HOM05D006840 ORTHO05D008588 4.3e-90 335.5 239 69.9
Cpa.g.sc39.39 Carica papaya HOM05D006840 ORTHO05D008588 1.3e-86 323.9 284 60.9
CDE02G0188 Ceratophyllum demersum HOM05D006840 ORTHO05D008588 3.8e-86 322.4 235 68.5
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 1.4e-85 320.5 248 66.5
Lj1A595G27 Lonicera japonica HOM05D006840 ORTHO05D008588 1.5e-82 310.5 287 58.9
Actinidia31085 Actinidia chinensis HOM05D006840 ORTHO05D008588 9.0e-80 301.2 217 69.6
Pp3c9_3810 Physcomitrium patens HOM05D006840 ORTHO05D008588 9.3e-77 291.2 273 54.9
SMO353G0271 Selaginella moellendorffii HOM05D006840 ORTHO05D008588 7.9e-76 288.1 260 57.3
MBI19_g03256_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 1.8e-72 276.9 286 54.9
Mapoly0031s0189 Marchantia polymorpha HOM05D006840 ORTHO05D008588 2.4e-72 276.6 253 55.3
unitig_22.g5732 Utricularia gibba HOM05D006840 ORTHO05D008588 1.5e-71 273.9 229 61.6
Pp3c15_10950 Physcomitrium patens HOM05D006840 ORTHO05D008588 4.5e-63 245.7 211 56.4
AagrBONN_evm.TU.Sc2ySwM_228.2548 Anthoceros agrestis HOM05D006840 ORTHO05D008588 7.6e-63 245.0 254 51.2
MBI07_g00615_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 6.7e-59 231.9 148 78.4
SEGI_09257 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 2.6e-55 219.9 197 58.4
CBR_g8822 Chara braunii HOM05D006840 ORTHO05D008588 1.2e-52 211.1 273 45.4
MCO02G353 Micromonas commoda HOM05D006840 ORTHO05D008588 1.0e-27 128.3 226 37.6
Actinidia34706 Actinidia chinensis HOM05D006840 ORTHO05D008588 2.8e-25 120.2 122 54.9
SEGI_35940 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 5.0e-22 109.4 132 50.8
Cre12.g536800 Chlamydomonas reinhardtii HOM05D006840 ORTHO05D008588 3.6e-20 103.2 225 33.3
Zm00001eb424130 Zea mays HOM05D006840 ORTHO05D008588 8.3e-17 92.0 64 67.2
Zm00001eb424170 Zea mays HOM05D006840 ORTHO05D008588 8.3e-17 92.0 64 67.2
PRCOL_00007103 Prasinoderma coloniale HOM05D006840 ORTHO05D008588 1.0e-11 75.1 230 30.0


User provided reference genes

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