Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 2.4e-44 182.2 119 100.0
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 3.8e-26 121.7 131 51.9
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 3.8e-26 121.7 131 52.7
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 1.1e-25 120.2 131 51.1
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 1.1e-25 120.2 131 51.9
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 1.9e-25 119.4 131 52.7
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 1.9e-25 119.4 131 53.4
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 2.5e-25 119.0 131 51.9
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 2.5e-25 119.0 131 51.9
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 3.2e-25 118.6 131 54.2
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 5.5e-25 117.9 131 52.7
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 7.2e-25 117.5 132 53.0
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 1.2e-24 116.7 131 50.4
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 1.2e-24 116.7 131 50.4
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 1.2e-24 116.7 131 50.4
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 1.6e-24 116.3 131 50.4
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 2.7e-24 115.5 131 49.6
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 2.7e-24 115.5 131 49.6
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.7e-24 115.5 131 49.6
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.7e-24 115.5 131 49.6
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.7e-24 115.5 131 49.6
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 3.5e-24 115.2 131 50.4
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 3.5e-24 115.2 131 49.6
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 4.6e-24 114.8 134 50.0
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 4.6e-24 114.8 132 52.3
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 4.6e-24 114.8 132 52.3
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 6.1e-24 114.4 131 51.1
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 6.1e-24 114.4 132 51.5
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 7.9e-24 114.0 131 48.9
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 1.0e-23 113.6 131 50.4
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 1.0e-23 113.6 131 48.1
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.0e-23 113.6 131 48.9
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 1.0e-23 113.6 131 49.6
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 1.3e-23 113.2 131 49.6
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 1.3e-23 113.2 131 48.9
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 1.3e-23 113.2 131 48.9
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 1.8e-23 112.8 132 51.5
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.8e-23 112.8 131 48.1
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.8e-23 112.8 131 48.1
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.8e-23 112.8 117 50.4
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 1.8e-23 112.8 131 48.1
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 1.8e-23 112.8 131 49.6
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 1.8e-23 112.8 131 48.1
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 2.3e-23 112.5 132 53.8
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 3.0e-23 112.1 131 48.9
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 3.9e-23 111.7 131 48.1
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 5.1e-23 111.3 131 48.9
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 5.1e-23 111.3 131 47.3
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 5.1e-23 111.3 131 49.6
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 6.7e-23 110.9 131 55.7
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 6.7e-23 110.9 131 49.6
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 6.7e-23 110.9 131 48.1
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 6.7e-23 110.9 131 48.9
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 8.7e-23 110.5 131 49.6
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 8.7e-23 110.5 131 47.3
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 8.7e-23 110.5 131 50.4
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 8.7e-23 110.5 131 48.9
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 1.1e-22 110.2 131 48.1
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 2.5e-22 109.0 136 47.1
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 2.5e-22 109.0 131 47.3
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 3.3e-22 108.6 131 48.1
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 3.3e-22 108.6 131 48.9
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 3.3e-22 108.6 131 48.1
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 3.3e-22 108.6 131 48.9
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 3.3e-22 108.6 131 48.9
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 4.3e-22 108.2 131 48.9
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 1.3e-21 106.7 131 48.9
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 1.3e-21 106.7 131 48.1
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 1.3e-21 106.7 131 48.1
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 1.3e-21 106.7 131 48.1
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 2.2e-21 105.9 131 47.3
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 2.2e-21 105.9 131 48.1
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 2.2e-21 105.9 131 48.1
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 2.2e-21 105.9 131 47.3
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 3.7e-21 105.1 131 47.3
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 3.7e-21 105.1 131 47.3
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 3.7e-21 105.1 131 52.7
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 3.7e-21 105.1 131 47.3
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 3.7e-21 105.1 131 47.3
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 3.7e-21 105.1 131 47.3
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 3.7e-21 105.1 131 47.3
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 3.7e-21 105.1 131 54.2
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 4.8e-21 104.8 131 53.4
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 4.8e-21 104.8 131 53.4
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 4.8e-21 104.8 131 53.4
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 6.3e-21 104.4 131 46.6
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 1.1e-20 103.6 131 50.4
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 1.8e-20 102.8 131 45.8
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 1.8e-20 102.8 131 45.8
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 3.1e-20 102.1 131 47.3
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 6.9e-20 100.9 131 43.5
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 9.0e-20 100.5 131 45.0
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 3.4e-19 98.6 131 44.3
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 1.0e-18 97.1 131 45.8
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 3.2e-17 92.0 131 40.5
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 6.1e-16 87.8 93 54.8
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 6.1e-16 87.8 118 44.1
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 7.9e-16 87.4 130 40.0
Eucgr.B00961 Eucalyptus grandis HOM05D006880 ORTHO05D008638 3.9e-15 85.1 50 82.0
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 1.5e-11 73.2 132 39.4
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 5.9e-11 71.2 106 41.5
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 1.0e-10 70.5 101 50.5
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 1.7e-10 69.7 102 44.1
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 1.7e-10 69.7 102 44.1
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 2.2e-10 69.3 105 41.0
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 6.5e-10 67.8 92 43.5
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 7.2e-09 64.3 131 33.6
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 7.9e-08 60.8 125 32.8
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 1.0e-07 60.5 102 37.3
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 6.7e-07 57.8 131 34.4
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 1.5e-06 56.6 57 52.6


User provided reference genes

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