Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B01204 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.6e-35 151.4 70 100.0
Eucgr.A00047 Eucalyptus grandis HOM05D001383 ORTHO05D000309 7.2e-33 143.3 69 92.8
Eucgr.E03636 Eucalyptus grandis HOM05D001383 ORTHO05D000309 7.2e-33 143.3 69 92.8
Eucgr.L01799 Eucalyptus grandis HOM05D001383 ORTHO05D000309 7.2e-33 143.3 69 92.8
Eucgr.L02287 Eucalyptus grandis HOM05D001383 ORTHO05D000309 7.2e-33 143.3 69 92.8
Eucgr.C02166 Eucalyptus grandis HOM05D001383 ORTHO05D000309 9.3e-33 142.9 69 92.8
Eucgr.L02571 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.6e-32 140.6 69 89.9
Eucgr.L02007 Eucalyptus grandis HOM05D001383 ORTHO05D000309 6.1e-32 140.2 69 91.3
Eucgr.E03477 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.0e-31 137.9 69 89.9
Eucgr.B01060 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.8e-29 131.3 69 88.4
Eucgr.C01025 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.7e-29 131.0 69 88.4
Eucgr.A00957 Eucalyptus grandis HOM05D007774 ORTHO05D000309 9.1e-28 126.3 68 83.8
Eucgr.H00233 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.0e-27 125.2 69 84.1
Eucgr.L00016 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.3e-26 122.5 68 79.4
Eucgr.J01886 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.7e-26 122.1 68 82.4
Eucgr.D00391 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.2e-26 121.7 68 79.4
Eucgr.E01520 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.2e-26 121.7 68 79.4
Eucgr.K02370 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.2e-26 121.7 68 79.4
Eucgr.A01677 Eucalyptus grandis HOM05D001383 ORTHO05D000309 8.5e-26 119.8 68 79.4
Eucgr.A00901 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.1e-25 119.4 68 79.4
Eucgr.H02949 Eucalyptus grandis HOM05D001383 ORTHO05D000309 9.4e-25 116.3 68 77.9
Eucgr.A01387 Eucalyptus grandis HOM05D001383 ORTHO05D000309 6.1e-24 113.6 68 75.0
Eucgr.B01520 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.1e-22 109.4 54 85.2
Eucgr.H02800 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.7e-21 105.5 70 62.9
Eucgr.H02671 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.8e-21 104.0 69 60.9
Eucgr.D00216 Eucalyptus grandis HOM05D001383 ORTHO05D000309 6.3e-21 103.6 69 63.8
Eucgr.B01616 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.4e-20 101.7 69 63.8
Eucgr.D01113 Eucalyptus grandis HOM05D001383 ORTHO05D000309 6.9e-20 100.1 69 60.9
Eucgr.L01275 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.5e-19 99.0 69 60.9
Eucgr.C01434 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.4e-19 97.8 69 62.3
Eucgr.J03169 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.9e-18 94.7 53 71.7
Eucgr.H02341 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.0e-18 94.0 69 55.1
BolC2t09377H Brassica oleracea HOM05D007774 ORTHO05D000309 3.1e-12 74.7 55 56.4
BcaB06g26191 Brassica carinata HOM05D007774 ORTHO05D000309 1.2e-11 72.8 61 49.2
BcaB08g36585 Brassica carinata HOM05D007774 ORTHO05D000309 1.2e-11 72.8 61 49.2
BcaB07g33982 Brassica carinata HOM05D007774 ORTHO05D000309 7.7e-11 70.1 61 49.2
BcaB08g35546 Brassica carinata HOM05D007774 ORTHO05D000309 1.0e-10 69.7 54 50.0
BcaC02g10455 Brassica carinata HOM05D007774 ORTHO05D000309 6.5e-10 67.0 53 52.8
BcaC02g10529 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-09 65.5 61 45.9
BolC5t33238H Brassica oleracea HOM05D007774 ORTHO05D000309 2.5e-09 65.1 55 47.3
BolC9t53939H Brassica oleracea HOM05D007774 ORTHO05D000309 2.5e-09 65.1 55 47.3
BolC2t09463H Brassica oleracea HOM05D007774 ORTHO05D000309 3.2e-09 64.7 55 47.3
BraA02t08177Z Brassica rapa HOM05D007774 ORTHO05D000309 3.2e-09 64.7 61 44.3
BolC8t49307H Brassica oleracea HOM05D007774 ORTHO05D000309 4.2e-09 64.3 55 47.3
Medtr1g039350 Medicago truncatula HOM05D001383 ORTHO05D000309 4.2e-09 64.3 63 42.9
DCAR_001137 Daucus carota HOM05D001383 ORTHO05D000309 7.2e-09 63.5 57 49.1
BcaC08g45193 Brassica carinata HOM05D007774 ORTHO05D000309 9.4e-09 63.2 61 42.6
BolC6t37988H Brassica oleracea HOM05D007774 ORTHO05D000309 9.4e-09 63.2 61 42.6
Rhsim11G0046300 Rhododendron simsii HOM05D001383 ORTHO05D000309 9.4e-09 63.2 57 47.4
BolC6t36100H Brassica oleracea HOM05D007774 ORTHO05D000309 1.2e-08 62.8 54 44.4
BraA02t06986Z Brassica rapa HOM05D007774 ORTHO05D000309 1.2e-08 62.8 55 45.5
BcaC06g36173 Brassica carinata HOM05D007774 ORTHO05D000309 2.1e-08 62.0 56 44.6
BcaC08g43835 Brassica carinata HOM05D007774 ORTHO05D000309 2.1e-08 62.0 56 44.6
Ah.04g159280 Amaranthus hybridus HOM05D008388 ORTHO05D000309 2.7e-08 61.6 61 49.2
Medtr2g008290 Medicago truncatula HOM05D001383 ORTHO05D000309 2.7e-08 61.6 62 38.7
Medtr3g045410 Medicago truncatula HOM05D001383 ORTHO05D000309 2.7e-08 61.6 46 50.0
Medtr5g021030 Medicago truncatula HOM05D001383 ORTHO05D000309 2.7e-08 61.6 62 38.7
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 3.6e-08 61.2 57 45.6
BcaC04g22268 Brassica carinata HOM05D007774 ORTHO05D000309 3.6e-08 61.2 64 45.3
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 3.6e-08 61.2 57 45.6
Lsat_1_v5_gn_8_86741 Lactuca sativa HOM05D009585 ORTHO05D000309 3.6e-08 61.2 57 49.1
BcaC01g01743 Brassica carinata HOM05D007774 ORTHO05D000309 4.7e-08 60.8 59 42.4
BcaB02g11205 Brassica carinata HOM05D007774 ORTHO05D000309 6.1e-08 60.5 56 42.9
BcaB02g11517 Brassica carinata HOM05D007774 ORTHO05D000309 6.1e-08 60.5 56 42.9
BcaB06g26754 Brassica carinata HOM05D007774 ORTHO05D000309 6.1e-08 60.5 56 42.9
BcaB06g27138 Brassica carinata HOM05D007774 ORTHO05D000309 6.1e-08 60.5 56 42.9
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 8.0e-08 60.1 57 43.9
Cfa010532 Carpinus fangiana HOM05D016218 ORTHO05D000309 8.0e-08 60.1 63 44.4
DCAR_017403 Daucus carota HOM05D027571 ORTHO05D000309 8.0e-08 60.1 57 47.4
Hma1.2p1_1051F.1_g252070 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 8.0e-08 60.1 57 45.6
Cfa020977 Carpinus fangiana HOM05D016218 ORTHO05D000309 1.0e-07 59.7 63 42.9
Ah.01g011000 Amaranthus hybridus HOM05D008388 ORTHO05D000309 1.4e-07 59.3 49 51.0
Ah.03g139560 Amaranthus hybridus HOM05D008388 ORTHO05D000309 1.4e-07 59.3 61 47.5
BcaB06g26683 Brassica carinata HOM05D007774 ORTHO05D000309 1.4e-07 59.3 56 42.9
Cfa012747 Carpinus fangiana HOM05D016218 ORTHO05D000309 1.4e-07 59.3 63 42.9
Lj2P1096T11 Lonicera japonica HOM05D008126 ORTHO05D000309 1.4e-07 59.3 57 47.4
Cfa017775 Carpinus fangiana HOM05D016218 ORTHO05D000309 1.8e-07 58.9 65 41.5
Dinv26432 Davidia involucrata HOM05D001383 ORTHO05D000309 1.8e-07 58.9 63 41.3
Hma1.2p1_0283F.1_g113450 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.8e-07 58.9 46 47.8
Nitab4.5_0001839g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.8e-07 58.9 44 54.5
Nitab4.5_0011664g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.8e-07 58.9 45 53.3
Nitab4.5_0029094g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.8e-07 58.9 45 53.3
Cfa014980 Carpinus fangiana HOM05D016218 ORTHO05D000309 2.3e-07 58.5 65 41.5
COL.COLO4_06499 Corchorus olitorius HOM05D015200 ORTHO05D000309 2.3e-07 58.5 47 48.9
COL.COLO4_15560 Corchorus olitorius HOM05D015200 ORTHO05D000309 2.3e-07 58.5 47 48.9
Hma1.2p1_1219F.1_g267960 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.3e-07 58.5 46 47.8
Lsat_1_v5_gn_3_138160 Lactuca sativa HOM05D009585 ORTHO05D000309 2.3e-07 58.5 64 46.9
Peaxi162Scf00562g00008 Petunia axillaris HOM05D004040 ORTHO05D000309 2.3e-07 58.5 46 52.2
Peaxi162Scf01167g00009 Petunia axillaris HOM05D004040 ORTHO05D000309 2.3e-07 58.5 46 52.2
BcaB02g11208 Brassica carinata HOM05D007774 ORTHO05D000309 3.0e-07 58.2 56 41.1
BcaC02g10427 Brassica carinata HOM05D007774 ORTHO05D000309 3.0e-07 58.2 46 47.8
BcaC04g20915 Brassica carinata HOM05D007774 ORTHO05D000309 3.0e-07 58.2 64 43.8
Cfa010691 Carpinus fangiana HOM05D016218 ORTHO05D000309 3.0e-07 58.2 65 43.1
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.0e-07 58.2 64 37.5
Lsat_1_v5_gn_3_24321 Lactuca sativa HOM05D009585 ORTHO05D000309 3.0e-07 58.2 54 48.1
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 3.0e-07 58.2 57 47.4
BcaB06g26508 Brassica carinata HOM05D007774 ORTHO05D000309 4.0e-07 57.8 56 41.1
DCAR_028160 Daucus carota HOM05D001383 ORTHO05D000309 4.0e-07 57.8 64 46.9
Eucgr.G02031 Eucalyptus grandis HOM05D015495 ORTHO05D000309 4.0e-07 57.8 66 39.4
BcaB06g26646 Brassica carinata HOM05D007774 ORTHO05D000309 5.2e-07 57.4 56 42.9
BcaB06g27506 Brassica carinata HOM05D007774 ORTHO05D000309 5.2e-07 57.4 53 43.4
BcaB07g33250 Brassica carinata HOM05D007774 ORTHO05D000309 5.2e-07 57.4 52 42.3
BcaNung03185 Brassica carinata HOM05D007774 ORTHO05D000309 5.2e-07 57.4 60 46.7
Lj4P203T20 Lonicera japonica HOM05D008126 ORTHO05D000309 5.2e-07 57.4 57 47.4
Medtr1g070405 Medicago truncatula HOM05D001383 ORTHO05D000309 5.2e-07 57.4 62 33.9
BcaB03g16083 Brassica carinata HOM05D007774 ORTHO05D000309 6.7e-07 57.0 57 42.1
BcaB06g27901 Brassica carinata HOM05D007774 ORTHO05D000309 6.7e-07 57.0 52 42.3
Eucgr.H03328 Eucalyptus grandis HOM05D015495 ORTHO05D000309 6.7e-07 57.0 66 39.4
Hma1.2p1_0362F.1_g136570 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.7e-07 57.0 46 47.8
Hma1.2p1_1382F.1_g279350 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 6.7e-07 57.0 57 40.4
Lsat_1_v5_gn_3_72860 Lactuca sativa HOM05D009585 ORTHO05D000309 6.7e-07 57.0 57 47.4
Lj4E150G0 Lonicera japonica HOM05D008126 ORTHO05D000309 6.7e-07 57.0 57 47.4
Lj5P426T12 Lonicera japonica HOM05D008126 ORTHO05D000309 6.7e-07 57.0 57 47.4
Nitab4.5_0001839g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.7e-07 57.0 44 52.3
Nitab4.5_0003518g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.7e-07 57.0 44 52.3
Peaxi162Scf00914g00516 Petunia axillaris HOM05D004040 ORTHO05D000309 6.7e-07 57.0 46 50.0
SalBow6G0195 Salvia bowleyana HOM05D008544 ORTHO05D010680 6.7e-07 57.0 47 53.2
SalBow7G1419 Salvia bowleyana HOM05D008544 ORTHO05D010680 6.7e-07 57.0 47 53.2
SalBow7G2169 Salvia bowleyana HOM05D008544 ORTHO05D010680 6.7e-07 57.0 47 53.2
BcaB02g11020 Brassica carinata HOM05D007774 ORTHO05D000309 8.8e-07 56.6 56 46.4
BcaB05g24508 Brassica carinata HOM05D001224 ORTHO05D000309 8.8e-07 56.6 46 43.5
BcaC06g34090 Brassica carinata HOM05D007774 ORTHO05D000309 8.8e-07 56.6 61 42.6
Dinv05615 Davidia involucrata HOM05D001383 ORTHO05D000309 8.8e-07 56.6 43 48.8
Dinv14680 Davidia involucrata HOM05D008126 ORTHO05D000309 8.8e-07 56.6 64 46.9
Lsat_1_v5_gn_2_57141 Lactuca sativa HOM05D009585 ORTHO05D000309 8.8e-07 56.6 57 47.4
COL.COLO4_10433 Corchorus olitorius HOM05D023691 ORTHO05D000309 1.2e-06 56.2 62 40.3
COL.COLO4_30330 Corchorus olitorius HOM05D015200 ORTHO05D000309 1.2e-06 56.2 47 46.8
DCAR_000258 Daucus carota HOM05D027571 ORTHO05D000309 1.2e-06 56.2 57 45.6
DCAR_018536 Daucus carota HOM05D027571 ORTHO05D000309 1.2e-06 56.2 57 45.6
Dinv09832 Davidia involucrata HOM05D001383 ORTHO05D000309 1.2e-06 56.2 41 51.2
Cfa008132 Carpinus fangiana HOM05D016218 ORTHO05D000309 1.5e-06 55.8 63 39.7
Dinv22727 Davidia involucrata HOM05D008126 ORTHO05D000309 1.5e-06 55.8 66 43.9
Hma1.2p1_0785F.1_g217480 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.5e-06 55.8 65 40.0
Hma1.2p1_1041F.1_g251030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.5e-06 55.8 41 48.8
Lsat_1_v5_gn_2_16641 Lactuca sativa HOM05D009585 ORTHO05D000309 1.5e-06 55.8 51 47.1
Lj3P238T23 Lonicera japonica HOM05D008126 ORTHO05D000309 1.5e-06 55.8 57 45.6
Lj8P545T2 Lonicera japonica HOM05D008126 ORTHO05D000309 1.5e-06 55.8 57 47.4
Atru.chr1.3458 Acer truncatum HOM05D001383 ORTHO05D000309 2.0e-06 55.5 41 46.3
DCAR_017399 Daucus carota HOM05D001383 ORTHO05D000309 2.0e-06 55.5 49 44.9
Nitab4.5_0000100g0180 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.0e-06 55.5 50 46.0
Nitab4.5_0001041g0150 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.0e-06 55.5 47 48.9
SGA_v2.0_scaffold38G14998 Striga asiatica HOM05D011630 ORTHO05D014269 2.0e-06 55.5 58 46.6
Lj9P287T24 Lonicera japonica HOM05D008126 ORTHO05D000309 2.6e-06 55.1 57 45.6
Lj6P93T3 Lonicera japonica HOM05D008126 ORTHO05D000309 3.3e-06 54.7 41 51.2
Hma1.2p1_2466F.1_g322651 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.4e-06 54.3 65 43.1
Lsat_1_v5_gn_1_95961 Lactuca sativa HOM05D009585 ORTHO05D000309 4.4e-06 54.3 44 50.0
Lsat_1_v5_gn_4_160641 Lactuca sativa HOM05D009585 ORTHO05D000309 4.4e-06 54.3 44 50.0
Lj2P78T23 Lonicera japonica HOM05D008126 ORTHO05D000309 4.4e-06 54.3 57 43.9
Lj7P745T14 Lonicera japonica HOM05D008126 ORTHO05D000309 4.4e-06 54.3 41 51.2
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 4.4e-06 54.3 41 51.2
Nitab4.5_0001288g0050 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.4e-06 54.3 44 47.7
Peaxi162Scf00562g00026 Petunia axillaris HOM05D004040 ORTHO05D000309 4.4e-06 54.3 46 47.8
vmacro12616 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 4.4e-06 54.3 41 48.8
CAN.G1459.18 Capsicum annuum HOM05D009408 ORTHO05D000309 5.7e-06 53.9 58 41.4
Lsat_1_v5_gn_4_135900 Lactuca sativa HOM05D009585 ORTHO05D000309 5.7e-06 53.9 70 45.7
EL10Ac6g14557 Beta vulgaris HOM05D007123 ORTHO05D000309 7.5e-06 53.5 49 49.0
BcaB02g11463 Brassica carinata HOM05D001224 ORTHO05D000309 7.5e-06 53.5 46 41.3
Hma1.2p1_0012F.1_g007370 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.5e-06 53.5 61 45.9
vmacro21229 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 7.5e-06 53.5 41 48.8
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 9.7e-06 53.1 61 41.0
Carub.0029s0002 Capsella rubella HOM05D010286 ORTHO05D011981 9.7e-06 53.1 43 53.5
Carub.0029s0004 Capsella rubella HOM05D010286 ORTHO05D011981 9.7e-06 53.1 43 53.5
Hma1.2p1_2569F.1_g324543 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 9.7e-06 53.1 69 39.1
Peaxi162Scf01302g00024 Petunia axillaris HOM05D001383 ORTHO05D000309 9.7e-06 53.1 51 41.2
QL08p000935 Quercus lobata HOM05D022142 ORTHO05D000309 9.7e-06 53.1 57 38.6
QL09p032030 Quercus lobata HOM05D001383 ORTHO05D000309 9.7e-06 53.1 58 43.1
Rhsim01G0020400 Rhododendron simsii HOM05D001383 ORTHO05D000309 9.7e-06 53.1 62 33.9
vmacro15909 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 9.7e-06 53.1 41 48.8


User provided reference genes

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