Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B00958 Eucalyptus grandis HOM05D002099 ORTHO05D002080 4.0e-54 214.5 110 100.0
MD11G1267400 Malus domestica HOM05D002099 ORTHO05D002080 4.4e-13 78.2 80 57.5
Ciclev10024123m.g Citrus clementina HOM05D002099 ORTHO05D002080 1.7e-12 76.3 78 55.1
Cpa.g.c47488 Carica papaya HOM05D002099 ORTHO05D002080 2.2e-12 75.9 78 56.4
Dinv18388 Davidia involucrata HOM05D002099 ORTHO05D002080 2.9e-12 75.5 80 55.0
FAN16G3110 Fragaria x ananassa HOM05D002099 ORTHO05D002080 4.9e-12 74.7 78 55.1
FvH4_3g17960 Fragaria vesca HOM05D002099 ORTHO05D002080 6.4e-12 74.3 78 53.8
TAR626G1033 Trochodendron aralioides HOM05D002099 ORTHO05D002080 1.9e-11 72.8 80 52.5
Aqoxy4G00213 Aquilegia oxysepala HOM05D002099 ORTHO05D002080 2.4e-11 72.4 80 55.0
FAN21G3358 Fragaria x ananassa HOM05D002099 ORTHO05D002080 7.1e-11 70.9 78 50.0
DCAR_019606 Daucus carota HOM05D002099 ORTHO05D002080 1.6e-10 69.7 80 48.8
FAN25G0224 Fragaria x ananassa HOM05D002099 ORTHO05D002080 2.1e-10 69.3 79 53.2
TAR629G0376 Trochodendron aralioides HOM05D002099 ORTHO05D002080 3.5e-10 68.6 78 51.3
Nn3g21047 Nelumbo nucifera HOM05D002099 ORTHO05D002080 4.6e-10 68.2 78 52.6
COL.COLO4_17524 Corchorus olitorius HOM05D004232 ORTHO05D004909 1.7e-09 66.2 80 53.8
Actinidia12596 Actinidia chinensis HOM05D002099 ORTHO05D002080 3.9e-09 65.1 80 47.5
TAR627G0673 Trochodendron aralioides HOM05D002099 ORTHO05D002080 3.9e-09 65.1 78 51.3
GSVIVG01014151001 Vitis vinifera HOM05D002099 ORTHO05D002080 5.1e-09 64.7 71 50.7
TWI39G0758 Tripterygium wilfordii HOM05D002099 ORTHO05D002080 8.7e-09 63.9 79 49.4
vmacro11962 Vaccinium macrocarpon HOM05D002099 ORTHO05D002080 8.7e-09 63.9 80 50.0
Aqoxy1G01946 Aquilegia oxysepala HOM05D002099 ORTHO05D002080 1.1e-08 63.5 78 47.4
MBI06_g16566_MAGBIO Magnolia biondii HOM05D002099 ORTHO05D002080 1.5e-08 63.2 78 48.7
Manes.03G091800 Manihot esculenta HOM05D002099 ORTHO05D002080 1.5e-08 63.2 78 48.7
CDE02G2274 Ceratophyllum demersum HOM05D002099 ORTHO05D002080 1.9e-08 62.8 78 47.4
Rhsim06G0211000 Rhododendron simsii HOM05D002099 ORTHO05D002080 1.9e-08 62.8 77 48.1
Solyc07g062230.4 Solanum lycopersicum HOM05D002099 ORTHO05D002080 3.3e-08 62.0 80 47.5
Sopen07g030510 Solanum pennellii HOM05D002099 ORTHO05D002080 3.3e-08 62.0 80 47.5
PGSC0003DMG400007064 Solanum tuberosum HOM05D002099 ORTHO05D002080 3.3e-08 62.0 80 47.5
MD03G1246800 Malus domestica HOM05D002099 ORTHO05D002080 4.3e-08 61.6 78 52.6
PSO782G0530 Papaver somniferum HOM05D002099 ORTHO05D002080 5.6e-08 61.2 78 51.3
Migut.M00702 Erythranthe guttata HOM05D002099 ORTHO05D002080 7.3e-08 60.8 78 50.0
Nitab4.5_0004191g0010 Nicotiana tabacum HOM05D002099 ORTHO05D002080 9.6e-08 60.5 81 45.7
PSO170G6085 Papaver somniferum HOM05D002099 ORTHO05D002080 9.6e-08 60.5 78 51.3
Duzib213G1096 Durio zibethinus HOM05D004150 ORTHO05D005087 1.3e-07 60.1 80 47.5
Lj1A826G60 Lonicera japonica HOM05D002099 ORTHO05D002080 1.3e-07 60.1 80 45.0
Oeu010026.1 Olea europaea HOM05D002099 ORTHO05D002080 1.3e-07 60.1 78 47.4
CAN.G375.41 Capsicum annuum HOM05D002099 ORTHO05D002080 1.6e-07 59.7 80 46.2
arahy.Tifrunner.gnm1.ann1.8WY03U Arachis hypogaea HOM05D002099 ORTHO05D002080 2.1e-07 59.3 79 45.6
Ciclev10014980m.g Citrus clementina HOM05D002099 ORTHO05D002080 2.1e-07 59.3 80 45.0
Peaxi162Scf00111g01452 Petunia axillaris HOM05D002099 ORTHO05D002080 2.1e-07 59.3 80 45.0
arahy.Tifrunner.gnm1.ann1.68LYJE Arachis hypogaea HOM05D002099 ORTHO05D002080 2.8e-07 58.9 79 45.6
CSS0029955 Camellia sinensis var. sinensis HOM05D002099 ORTHO05D002080 2.8e-07 58.9 54 57.4
Nitab4.5_0000347g0160 Nicotiana tabacum HOM05D002099 ORTHO05D002080 6.2e-07 57.8 80 45.0
Prupe.4G158200 Prunus persica HOM05D002099 ORTHO05D002080 1.4e-06 56.6 61 54.1
Hma1.2p1_0050F.1_g028950 Hydrangea macrophylla HOM05D002099 ORTHO05D002080 3.1e-06 55.5 81 44.4
Lsat_1_v5_gn_4_49340 Lactuca sativa HOM05D002099 ORTHO05D002080 4.0e-06 55.1 78 43.6
TWI53G0885 Tripterygium wilfordii HOM05D002099 ORTHO05D002080 5.3e-06 54.7 78 42.3
Cc05_g10880 Coffea canephora HOM05D002099 ORTHO05D002080 6.9e-06 54.3 78 46.2
Hma1.2p1_1150F.1_g261800 Hydrangea macrophylla HOM05D002099 ORTHO05D002080 6.9e-06 54.3 78 44.9
Phvul.006G170800 Phaseolus vulgaris HOM05D002099 ORTHO05D002080 6.9e-06 54.3 80 42.5


User provided reference genes

Program Settings