Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 2.6e-92 342.0 173 100.0
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 6.1e-49 198.0 157 67.5
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 1.9e-42 176.4 160 60.6
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 2.1e-41 172.9 149 59.7
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 3.6e-41 172.2 137 63.5
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 1.0e-40 170.6 125 68.8
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 3.0e-40 169.1 153 62.1
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 6.7e-40 167.9 142 56.3
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 1.5e-39 166.8 130 63.8
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 3.3e-39 165.6 133 65.4
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 4.3e-39 165.2 138 62.3
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 1.3e-38 163.7 166 57.8
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 2.8e-38 162.5 126 64.3
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 4.8e-38 161.8 143 58.7
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 6.3e-38 161.4 141 55.3
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 8.2e-38 161.0 126 63.5
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 1.8e-37 159.8 142 59.9
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 5.3e-37 158.3 144 59.7
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 1.5e-36 156.8 139 60.4
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 2.6e-36 156.0 127 63.8
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 2.6e-36 156.0 126 62.7
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 4.5e-36 155.2 126 61.9
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 1.0e-35 154.1 140 59.3
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 1.7e-35 153.3 141 54.6
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 1.4e-34 150.2 127 62.2
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 1.9e-34 149.8 127 60.6
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 7.2e-34 147.9 136 55.9
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 7.2e-34 147.9 150 52.0
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 7.2e-34 147.9 150 52.0
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 7.2e-34 147.9 126 58.7
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 1.6e-33 146.7 152 53.3
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 1.4e-32 143.7 126 57.9
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 2.0e-31 139.8 137 54.0
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 9.7e-31 137.5 137 54.7
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 3.7e-30 135.6 160 53.1
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 1.4e-29 133.7 145 50.3
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 1.4e-29 133.7 145 50.3
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 3.1e-29 132.5 158 51.9
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 5.3e-29 131.7 169 46.2
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 7.0e-29 131.3 148 50.7
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 2.0e-28 129.8 133 54.1
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 2.6e-28 129.4 131 51.9
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 1.5e-26 123.6 128 53.9
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 2.7e-25 119.4 162 43.8
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 4.8e-22 108.6 117 56.4
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 8.2e-22 107.8 91 57.1
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 9.1e-21 104.4 133 46.6
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 6.5e-19 98.2 167 41.3
HanXRQChr08g0217441 Helianthus annuus HOM05D008254 ORTHO05D010423 1.1e-18 97.4 79 60.8
Nn3g20147 Nelumbo nucifera HOM05D008254 ORTHO05D010423 1.5e-18 97.1 71 66.2
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 5.7e-15 85.1 75 57.3
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 1.4e-13 80.5 60 60.0
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 6.1e-09 65.1 93 45.2
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 2.3e-08 63.2 81 48.1
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 5.2e-08 62.0 88 42.0
Hma1.2p1_3161F.1_g333460 Hydrangea macrophylla HOM05D008254 ORTHO05D010423 1.7e-06 57.0 89 40.4
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 2.8e-06 56.2 77 44.2


User provided reference genes

Program Settings