Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B00904 Eucalyptus grandis HOM05D006133 ORTHO05D007855 1.7e-83 312.8 174 100.0
Eucgr.B00955 Eucalyptus grandis HOM05D006133 ORTHO05D007855 1.1e-42 177.2 174 66.7
Eucgr.B00901 Eucalyptus grandis HOM05D006133 ORTHO05D007855 7.2e-42 174.5 174 65.5
Eucgr.B00952 Eucalyptus grandis HOM05D006133 ORTHO05D007855 1.0e-40 170.6 91 97.8
Manes.16G026900 Manihot esculenta HOM05D006133 ORTHO05D007855 1.2e-17 94.0 144 43.1
QL05p040164 Quercus lobata HOM05D006133 ORTHO05D007855 1.5e-15 87.0 144 39.6
Thecc.06G188500 Theobroma cacao HOM05D006133 ORTHO05D007855 3.4e-15 85.9 144 38.9
Glyma.13G179800 Glycine max HOM05D006133 ORTHO05D007855 9.8e-15 84.3 144 41.0
Cpa.g.sc27.45 Carica papaya HOM05D006133 ORTHO05D007855 1.3e-14 84.0 140 40.7
Phvul.002G234200 Phaseolus vulgaris HOM05D006133 ORTHO05D007855 2.2e-14 83.2 144 39.6
Atru.chr10.1894 Acer truncatum HOM05D006133 ORTHO05D007855 2.9e-14 82.8 144 38.2
Duzib235G0895 Durio zibethinus HOM05D006133 ORTHO05D007855 3.7e-14 82.4 144 36.8
Prupe.4G046300 Prunus persica HOM05D006133 ORTHO05D007855 3.7e-14 82.4 144 38.2
Gorai.011G027600 Gossypium raimondii HOM05D006133 ORTHO05D007855 4.9e-14 82.0 144 37.5
CSS0047692 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 8.3e-14 81.3 183 33.3
COL.COLO4_31481 Corchorus olitorius HOM05D006133 ORTHO05D007855 8.3e-14 81.3 144 38.2
FvH4_3g09320 Fragaria vesca HOM05D006133 ORTHO05D007855 8.3e-14 81.3 144 37.5
Lj4g0021405 Lotus japonicus HOM05D006133 ORTHO05D007855 8.3e-14 81.3 144 40.3
FAN16G1924 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.1e-13 80.9 181 33.1
RcHm_v2.0_Chr5g0008281 Rosa chinensis HOM05D006133 ORTHO05D007855 1.1e-13 80.9 144 37.5
FAN11G1298 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.8e-13 80.1 175 33.7
ClCG03G006010 Citrullus lanatus HOM05D006133 ORTHO05D007855 3.2e-13 79.3 144 37.5
MELO3C002599.2 Cucumis melo HOM05D006133 ORTHO05D007855 3.2e-13 79.3 144 37.5
CsaV3_1G012270 Cucumis sativus L. HOM05D006133 ORTHO05D007855 3.2e-13 79.3 144 37.5
Gohir.A10G025600 Gossypium hirsutum HOM05D006133 ORTHO05D007855 4.1e-13 79.0 144 36.1
TPR.G12027 Trifolium pratense HOM05D006133 ORTHO05D007855 4.1e-13 79.0 144 38.2
VMungo0251G0712 Vigna mungo HOM05D006133 ORTHO05D007855 4.1e-13 79.0 144 37.5
Cfa000437 Carpinus fangiana HOM05D006133 ORTHO05D007855 7.0e-13 78.2 140 37.9
Haze_06477 Corylus avellana HOM05D006133 ORTHO05D007855 7.0e-13 78.2 140 37.9
Glyma.07G196100 Glycine max HOM05D006133 ORTHO05D007855 7.0e-13 78.2 144 38.2
Medtr4g088855 Medicago truncatula HOM05D006133 ORTHO05D007855 7.0e-13 78.2 144 38.2
CiPaw.09G059200 Carya illinoinensis HOM05D006133 ORTHO05D007855 9.2e-13 77.8 144 37.5
Hma1.2p1_0785F.1_g217580 Hydrangea macrophylla HOM05D006133 ORTHO05D007855 9.2e-13 77.8 144 38.2
Oeu057904.1 Olea europaea HOM05D006133 ORTHO05D007855 9.2e-13 77.8 181 37.6
Dinv40551 Davidia involucrata HOM05D006133 ORTHO05D007855 1.2e-12 77.4 140 39.3
Ca_18541_v3 Cicer arietinum L. HOM05D006133 ORTHO05D007855 2.7e-12 76.3 144 36.8
Potri.004G042800 Populus trichocarpa HOM05D006133 ORTHO05D007855 2.7e-12 76.3 144 37.5
ECA234G2723 Erigeron canadensis HOM05D006133 ORTHO05D007855 6.0e-12 75.1 144 36.1
PSO478G5317 Papaver somniferum HOM05D006133 ORTHO05D007855 6.0e-12 75.1 144 35.4
PSO478G1675 Papaver somniferum HOM05D006133 ORTHO05D007855 7.8e-12 74.7 144 35.4
Cc01_g03530 Coffea canephora HOM05D006133 ORTHO05D007855 1.0e-11 74.3 144 34.0
Lj1A1206T67 Lonicera japonica HOM05D006133 ORTHO05D007855 1.0e-11 74.3 144 37.5
Ciclev10017918m.g Citrus clementina HOM05D006133 ORTHO05D007855 1.7e-11 73.6 119 40.3
AUR62014816 Chenopodium quinoa HOM05D006133 ORTHO05D007855 2.3e-11 73.2 144 35.4
AUR62017011 Chenopodium quinoa HOM05D006133 ORTHO05D007855 2.3e-11 73.2 144 35.4
Cc02_g13300 Coffea canephora HOM05D006133 ORTHO05D007855 2.3e-11 73.2 144 34.0
Migut.M01145 Erythranthe guttata HOM05D006133 ORTHO05D007855 2.3e-11 73.2 144 35.4
THA.LOC104814218 Tarenaya hassleriana HOM05D006133 ORTHO05D007855 2.3e-11 73.2 144 38.2
ATR0584G083 Amborella trichopoda HOM05D006133 ORTHO05D007855 3.0e-11 72.8 144 38.2
Carub.0004s1546 Capsella rubella HOM05D006133 ORTHO05D007855 3.0e-11 72.8 144 36.1
Actinidia05630 Actinidia chinensis HOM05D006133 ORTHO05D007855 5.0e-11 72.0 144 35.4
arahy.Tifrunner.gnm1.ann1.YAJ938 Arachis hypogaea HOM05D006133 ORTHO05D007855 5.0e-11 72.0 156 36.5
MBI09_g12165_MAGBIO Magnolia biondii HOM05D006133 ORTHO05D007855 5.0e-11 72.0 144 36.1
unitig_22.g6229 Utricularia gibba HOM05D006133 ORTHO05D007855 8.6e-11 71.2 144 34.0
BcaC02g07769 Brassica carinata HOM05D006133 ORTHO05D007855 1.5e-10 70.5 144 38.9
BolC4t27810H Brassica oleracea HOM05D006133 ORTHO05D007855 1.9e-10 70.1 144 38.9
FAN21G1061 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.9e-10 70.1 119 38.7
Peaxi162Scf00736g00427 Petunia axillaris HOM05D006133 ORTHO05D007855 1.9e-10 70.1 180 31.1
Hund23730 Selenicereus undatus HOM05D006133 ORTHO05D007855 1.9e-10 70.1 144 34.7
Hund23731 Selenicereus undatus HOM05D006133 ORTHO05D007855 1.9e-10 70.1 144 34.7
FAN25G2154 Fragaria x ananassa HOM05D006133 ORTHO05D007855 4.3e-10 68.9 122 37.7
AT2G33793 Arabidopsis thaliana HOM05D006133 ORTHO05D007855 9.5e-10 67.8 144 36.8
Sopen02g023140 Solanum pennellii HOM05D006133 ORTHO05D007855 1.2e-09 67.4 144 34.7
TAR628G0719 Trochodendron aralioides HOM05D006133 ORTHO05D007855 1.2e-09 67.4 144 33.3
Sc05g0007700 Simmondsia chinensis HOM05D006133 ORTHO05D007855 2.1e-09 66.6 144 35.4
EL10Ac8g20377 Beta vulgaris HOM05D006133 ORTHO05D007855 2.8e-09 66.2 119 39.5
BraA04t18104Z Brassica rapa HOM05D006133 ORTHO05D007855 3.6e-09 65.9 127 38.6
C04p63360 Brassica napus HOM05D006133 ORTHO05D007855 1.1e-08 64.3 127 40.2
CARHR127900 Cardamine hirsuta HOM05D006133 ORTHO05D007855 1.4e-08 63.9 144 34.0
Thhalv10017234m.g Eutrema salsugineum HOM05D006133 ORTHO05D007855 1.4e-08 63.9 144 39.6
AagrBONN_evm.TU.Sc2ySwM_228.202 Anthoceros agrestis HOM05D006133 ORTHO05D007855 1.8e-08 63.5 140 30.0
A04p26010 Brassica napus HOM05D006133 ORTHO05D007855 1.8e-08 63.5 113 39.8
Ah.09g237330 Amaranthus hybridus HOM05D006133 ORTHO05D007855 2.3e-08 63.2 115 35.7
AL4G29540 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 4.0e-08 62.4 144 33.3
arahy.Tifrunner.gnm1.ann1.Y5A5WX Arachis hypogaea HOM05D006133 ORTHO05D007855 4.0e-08 62.4 144 34.0
CAN.G1164.26 Capsicum annuum HOM05D006133 ORTHO05D007855 4.0e-08 62.4 144 33.3
Os03g0837800 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 8.9e-08 61.2 144 27.8
Solyc02g078280.3 Solanum lycopersicum HOM05D006133 ORTHO05D007855 1.2e-07 60.8 105 39.0
MD05G1313300 Malus domestica HOM05D006133 ORTHO05D007855 2.0e-07 60.1 101 37.6
C04p15330 Brassica napus HOM05D006133 ORTHO05D007855 2.6e-07 59.7 154 32.5
CDE04G1633 Ceratophyllum demersum HOM05D006133 ORTHO05D007855 3.4e-07 59.3 119 33.6
Solyc02g078290.4 Solanum lycopersicum HOM05D006133 ORTHO05D007855 3.4e-07 59.3 152 32.9
PGSC0003DMG400029689 Solanum tuberosum HOM05D006133 ORTHO05D007855 3.4e-07 59.3 141 31.9
BolC4t23106H Brassica oleracea HOM05D006133 ORTHO05D007855 4.4e-07 58.9 143 38.5
Sed0025328 Sechium edule HOM05D006133 ORTHO05D007855 4.4e-07 58.9 101 39.6
SMO353G0258 Selaginella moellendorffii HOM05D006133 ORTHO05D007855 4.4e-07 58.9 140 27.9
BcaC02g11457 Brassica carinata HOM05D006133 ORTHO05D007855 5.8e-07 58.5 144 33.3
Psat7g113640 Pisum sativum HOM05D006133 ORTHO05D007855 7.5e-07 58.2 143 31.5
Zm00001eb063880 Zea mays HOM05D006133 ORTHO05D007855 9.8e-07 57.8 144 29.9
Gohir.D10G026300 Gossypium hirsutum HOM05D006133 ORTHO05D007855 1.3e-06 57.4 101 34.7
CSS0042278 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 1.7e-06 57.0 144 31.2
Dinv07556 Davidia involucrata HOM05D006133 ORTHO05D007855 2.9e-06 56.2 100 37.0
AL4G11580 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 4.9e-06 55.5 86 39.5
Rhsim13G0177600 Rhododendron simsii HOM05D006133 ORTHO05D007855 6.4e-06 55.1 183 33.9
Lsat_1_v5_gn_4_52940 Lactuca sativa HOM05D006133 ORTHO05D007855 8.3e-06 54.7 144 31.2


User provided reference genes

Program Settings