Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B00851 Eucalyptus grandis HOM05D006376 ORTHO05D008046 4.7e-146 521.2 260 100.0
Prupe.5G228200 Prunus persica HOM05D006376 ORTHO05D008046 1.6e-93 346.7 257 68.9
CiPaw.15G138400 Carya illinoinensis HOM05D006376 ORTHO05D008046 6.0e-93 344.7 209 78.9
GSVIVG01008377001 Vitis vinifera HOM05D006376 ORTHO05D008046 1.8e-92 343.2 207 78.3
CiPaw.15G139000 Carya illinoinensis HOM05D006376 ORTHO05D008046 4.8e-90 335.1 270 65.9
Dinv13549 Davidia involucrata HOM05D006376 ORTHO05D008046 9.0e-89 330.9 215 74.4
QL10p027316 Quercus lobata HOM05D006376 ORTHO05D008046 1.2e-88 330.5 205 78.0
arahy.Tifrunner.gnm1.ann1.5Y9SE5 Arachis hypogaea HOM05D006376 ORTHO05D008046 2.0e-88 329.7 207 75.4
PGR083G0770 Punica granatum HOM05D006376 ORTHO05D008046 3.4e-88 328.9 242 69.0
MELO3C017340.2 Cucumis melo HOM05D006376 ORTHO05D008046 9.9e-88 327.4 216 74.5
Atru.chr9.942 Acer truncatum HOM05D006376 ORTHO05D008046 4.9e-87 325.1 221 72.9
Cc04_g06670 Coffea canephora HOM05D006376 ORTHO05D008046 6.4e-87 324.7 244 63.5
Thecc.03G047000 Theobroma cacao HOM05D006376 ORTHO05D008046 6.4e-87 324.7 241 66.8
CANSAT21G0790 Cannabis sativa HOM05D006376 ORTHO05D008046 1.4e-86 323.6 209 75.6
Cpa.g.sc3.442 Carica papaya HOM05D006376 ORTHO05D008046 1.4e-86 323.6 267 64.8
TPR.G12760 Trifolium pratense HOM05D006376 ORTHO05D008046 1.4e-86 323.6 204 74.0
TWI81G0521 Tripterygium wilfordii HOM05D006376 ORTHO05D008046 1.9e-86 323.2 200 78.0
Manes.14G168100 Manihot esculenta HOM05D006376 ORTHO05D008046 2.4e-86 322.8 280 63.6
Ciclev10009207m.g Citrus clementina HOM05D006376 ORTHO05D008046 3.2e-86 322.4 203 77.8
Gohir.D12G268200 Gossypium hirsutum HOM05D006376 ORTHO05D008046 3.2e-86 322.4 262 64.5
Psat7g004120 Pisum sativum HOM05D006376 ORTHO05D008046 3.2e-86 322.4 206 73.8
Gorai.008G288200 Gossypium raimondii HOM05D006376 ORTHO05D008046 4.2e-86 322.0 262 64.5
TAR629G1456 Trochodendron aralioides HOM05D006376 ORTHO05D008046 4.2e-86 322.0 199 75.4
Oeu024338.1 Olea europaea HOM05D006376 ORTHO05D008046 7.1e-86 321.2 206 73.8
FvH4_5g16950 Fragaria vesca HOM05D006376 ORTHO05D008046 9.3e-86 320.9 243 67.9
FAN18G1549 Fragaria x ananassa HOM05D006376 ORTHO05D008046 9.3e-86 320.9 243 67.9
FAN08G1323 Fragaria x ananassa HOM05D006376 ORTHO05D008046 1.2e-85 320.5 243 68.7
Phvul.002G327000 Phaseolus vulgaris HOM05D006376 ORTHO05D008046 1.2e-85 320.5 258 65.1
RhsimUnG0086600 Rhododendron simsii HOM05D006376 ORTHO05D008046 1.2e-85 320.5 203 74.9
arahy.Tifrunner.gnm1.ann1.CZ5T9B Arachis hypogaea HOM05D006376 ORTHO05D008046 1.6e-85 320.1 267 63.3
Lj9A422G67 Lonicera japonica HOM05D006376 ORTHO05D008046 2.1e-85 319.7 200 76.0
Lalb_Chr09g0330601 Lupinus albus HOM05D006376 ORTHO05D008046 2.1e-85 319.7 204 75.0
Rhsim07G0069700 Rhododendron simsii HOM05D006376 ORTHO05D008046 2.1e-85 319.7 203 74.9
FAN04G0856 Fragaria x ananassa HOM05D006376 ORTHO05D008046 2.7e-85 319.3 243 68.3
Glyma.05G243300 Glycine max HOM05D006376 ORTHO05D008046 3.5e-85 318.9 206 74.3
COL.COLO4_37647 Corchorus olitorius HOM05D006376 ORTHO05D008046 6.0e-85 318.2 211 73.0
RcHm_v2.0_Chr7g0179071 Rosa chinensis HOM05D006376 ORTHO05D008046 6.0e-85 318.2 243 67.5
CsaV3_1G004140 Cucumis sativus L. HOM05D006376 ORTHO05D008046 7.9e-85 317.8 263 65.8
VMungo0251G1463 Vigna mungo HOM05D006376 ORTHO05D008046 7.9e-85 317.8 258 64.3
Glyma.08G051100 Glycine max HOM05D006376 ORTHO05D008046 1.8e-84 316.6 206 74.3
Hma1.2p1_0660F.1_g197700 Hydrangea macrophylla HOM05D006376 ORTHO05D008046 3.9e-84 315.5 201 74.1
FAN13G1861 Fragaria x ananassa HOM05D006376 ORTHO05D008046 6.7e-84 314.7 243 67.1
Lj4g0006852 Lotus japonicus HOM05D006376 ORTHO05D008046 1.1e-83 313.9 203 73.4
Nn3g18015 Nelumbo nucifera HOM05D006376 ORTHO05D008046 1.5e-83 313.5 210 71.4
Rhsim07G0070500 Rhododendron simsii HOM05D006376 ORTHO05D008046 2.5e-83 312.8 205 72.7
DCAR_014774 Daucus carota HOM05D006376 ORTHO05D008046 1.3e-82 310.5 219 67.6
AUR62029950 Chenopodium quinoa HOM05D006376 ORTHO05D008046 2.1e-82 309.7 203 71.9
Duzib205G0506 Durio zibethinus HOM05D006376 ORTHO05D008046 2.1e-82 309.7 273 63.0
Thhalv10008687m.g Eutrema salsugineum HOM05D006376 ORTHO05D008046 2.1e-82 309.7 221 69.7
Hund02337 Selenicereus undatus HOM05D006376 ORTHO05D008046 4.8e-82 308.5 207 71.5
THA.LOC104813912 Tarenaya hassleriana HOM05D006376 ORTHO05D008046 1.1e-81 307.4 202 71.8
Medtr8g106690 Medicago truncatula HOM05D006376 ORTHO05D008046 1.4e-81 307.0 216 71.8
Lsat_1_v5_gn_8_3561 Lactuca sativa HOM05D006376 ORTHO05D008046 6.9e-81 304.7 214 67.3
Haze_18787 Corylus avellana HOM05D006376 ORTHO05D008046 1.2e-80 303.9 174 81.6
EL10Ac5g11519 Beta vulgaris HOM05D006376 ORTHO05D008046 1.5e-80 303.5 225 65.3
A08p30580 Brassica napus HOM05D006376 ORTHO05D008046 1.5e-80 303.5 202 71.8
Carub.0001s1773 Capsella rubella HOM05D006376 ORTHO05D008046 1.5e-80 303.5 202 71.8
Cfa019704 Carpinus fangiana HOM05D006376 ORTHO05D008046 2.6e-80 302.8 173 82.1
C08p18330 Brassica napus HOM05D006376 ORTHO05D008046 3.4e-80 302.4 202 71.8
BolC8t49467H Brassica oleracea HOM05D006376 ORTHO05D008046 3.4e-80 302.4 202 71.8
Potri.012G052300 Populus trichocarpa HOM05D006376 ORTHO05D008046 3.4e-80 302.4 276 61.2
Sabra12G0035600 Salix brachista HOM05D006376 ORTHO05D008046 3.4e-80 302.4 275 61.8
Actinidia02655 Actinidia chinensis HOM05D006376 ORTHO05D008046 7.6e-80 301.2 263 61.6
CARHR018640 Cardamine hirsuta HOM05D006376 ORTHO05D008046 1.0e-79 300.8 202 71.3
AUR62033755 Chenopodium quinoa HOM05D006376 ORTHO05D008046 1.0e-79 300.8 203 70.4
Sc04g0003270 Simmondsia chinensis HOM05D006376 ORTHO05D008046 1.3e-79 300.4 176 79.0
AL1G30420 Arabidopsis lyrata HOM05D006376 ORTHO05D008046 2.2e-79 299.7 202 69.8
HanXRQChr05g0144491 Helianthus annuus HOM05D006376 ORTHO05D008046 2.2e-79 299.7 208 68.8
Aqoxy3G03987 Aquilegia oxysepala HOM05D006376 ORTHO05D008046 3.8e-79 298.9 203 70.9
MBI16_g21168_MAGBIO Magnolia biondii HOM05D006376 ORTHO05D008046 3.8e-79 298.9 195 72.3
MSTRG.4559 Avicennia marina HOM05D006376 ORTHO05D008046 1.4e-78 297.0 265 61.9
vmacro17793 Vaccinium macrocarpon HOM05D006376 ORTHO05D008046 1.4e-78 297.0 237 64.6
AT1G18060 Arabidopsis thaliana HOM05D006376 ORTHO05D008046 5.5e-78 295.0 202 69.3
ECA233G1742 Erigeron canadensis HOM05D006376 ORTHO05D008046 9.3e-78 294.3 216 64.8
Nitab4.5_0012340g0010 Nicotiana tabacum HOM05D006376 ORTHO05D008046 1.6e-77 293.5 223 64.6
BraA08t34989Z Brassica rapa HOM05D000280 ORTHO05D004091 2.1e-77 293.1 177 78.0
Nitab4.5_0001194g0140 Nicotiana tabacum HOM05D006376 ORTHO05D008046 8.7e-76 287.7 223 62.3
Zm00001eb334810 Zea mays HOM05D006376 ORTHO05D008046 1.5e-75 287.0 210 66.2
Solyc06g069030.3 Solanum lycopersicum HOM05D006376 ORTHO05D008046 9.7e-75 284.3 203 67.0
SGA_v2.0_scaffold171G38935 Striga asiatica HOM05D006376 ORTHO05D008046 1.3e-74 283.9 252 58.3
PSO675G4918 Papaver somniferum HOM05D006376 ORTHO05D008046 1.6e-74 283.5 191 70.7
PSO717G0073 Papaver somniferum HOM05D006376 ORTHO05D008046 2.1e-74 283.1 191 70.7
CDE03G0312 Ceratophyllum demersum HOM05D006376 ORTHO05D008046 2.8e-74 282.7 195 67.2
Peaxi162Scf00332g00023 Petunia axillaris HOM05D006376 ORTHO05D008046 2.8e-74 282.7 204 66.7
Aa31LG6G2990 Aethionema arabicum HOM05D006376 ORTHO05D008046 1.1e-73 280.8 205 68.3
Os01g0120500 Oryza sativa ssp. japonica HOM05D006376 ORTHO05D008046 3.1e-73 279.3 233 60.9
PGSC0003DMG400028793 Solanum tuberosum HOM05D006376 ORTHO05D008046 4.1e-73 278.9 214 63.1
ClCG06G014480 Citrullus lanatus HOM05D006376 ORTHO05D008046 5.3e-73 278.5 260 60.4
CAN.G423.18 Capsicum annuum HOM05D006376 ORTHO05D008046 9.0e-73 277.7 219 63.0
Ca_17222_v3 Cicer arietinum L. HOM05D006376 ORTHO05D008046 3.4e-72 275.8 162 77.8
Sopen06g026320 Solanum pennellii HOM05D006376 ORTHO05D008046 3.4e-72 275.8 200 66.5
BcaC07g38909 Brassica carinata HOM05D006376 ORTHO05D008046 1.7e-71 273.5 161 79.5
Duzib084G1315 Durio zibethinus HOM05D006376 ORTHO05D008046 8.5e-71 271.2 199 65.8
Lj3g0018404 Lotus japonicus HOM05D006376 ORTHO05D008046 8.5e-71 271.2 176 75.0
ATR0691G291 Amborella trichopoda HOM05D006376 ORTHO05D008046 3.2e-70 269.2 203 64.5
Sp1g16080 Schrenkiella parvula HOM05D006376 ORTHO05D008046 1.3e-68 263.8 149 81.2
Gohir.A12G267700 Gossypium hirsutum HOM05D006376 ORTHO05D008046 1.2e-64 250.8 262 55.0
HPP92_000150 Vanilla planifolia HOM05D006376 ORTHO05D008046 1.5e-64 250.4 174 67.2
SEGI_27865 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 4.6e-61 238.8 177 64.4
Migut.D01443 Erythranthe guttata HOM05D006376 ORTHO05D008046 2.6e-59 233.0 176 63.6
unitig_21.g20431 Utricularia gibba HOM05D006376 ORTHO05D008046 4.1e-57 225.7 202 60.9
Pp3c8_21790 Physcomitrium patens HOM05D006376 ORTHO05D008046 1.1e-54 217.6 190 55.8
MD06G1223100 Malus domestica HOM05D006376 ORTHO05D008046 1.9e-54 216.9 120 79.2
AagrBONN_evm.TU.Sc2ySwM_340.32 Anthoceros agrestis HOM05D006376 ORTHO05D008046 3.2e-54 216.1 209 49.8
Mapoly0001s0324 Marchantia polymorpha HOM05D006376 ORTHO05D008046 3.1e-49 199.5 262 41.6
SMO116G0316 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 4.7e-45 185.7 192 46.9
SMO164G0083 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 9.7e-43 177.9 177 48.6
MD14G1232300 Malus domestica HOM05D006376 ORTHO05D008046 3.0e-36 156.4 160 56.9
SEGI_30520 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 2.0e-35 153.7 94 72.3
Thecc.03G047400 Theobroma cacao HOM05D006376 ORTHO05D008046 5.9e-32 142.1 156 55.1
Rhsim07G0070600 Rhododendron simsii HOM05D006376 ORTHO05D008046 1.8e-28 130.6 99 68.7
Hma1.2p1_0660F.1_g197690 Hydrangea macrophylla HOM05D006376 ORTHO05D008046 1.1e-25 121.3 89 70.8
arahy.Tifrunner.gnm1.ann1.8TB400 Arachis hypogaea HOM05D006376 ORTHO05D008046 3.8e-23 112.8 90 65.6
arahy.Tifrunner.gnm1.ann1.Y3IZ58 Arachis hypogaea HOM05D006376 ORTHO05D008046 8.6e-23 111.7 90 64.4
arahy.Tifrunner.gnm1.ann1.W819WZ Arachis hypogaea HOM05D006376 ORTHO05D008046 4.3e-22 109.4 90 63.3
arahy.Tifrunner.gnm1.ann1.FQ3MGU Arachis hypogaea HOM05D006376 ORTHO05D008046 7.3e-22 108.6 90 63.3
arahy.Tifrunner.gnm1.ann1.VLX8JM Arachis hypogaea HOM05D006376 ORTHO05D008046 1.2e-21 107.8 129 51.9
Cre09.g401350 Chlamydomonas reinhardtii HOM05D006376 ORTHO05D008046 1.0e-20 104.8 174 36.8
PRCOL_00002665 Prasinoderma coloniale HOM05D006376 ORTHO05D008046 1.2e-19 101.3 171 35.1
SEGI_17791 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 1.3e-15 87.8 60 61.7
arahy.Tifrunner.gnm1.ann1.XS5A0Y Arachis hypogaea HOM05D006376 ORTHO05D008046 8.6e-15 85.1 70 64.3
arahy.Tifrunner.gnm1.ann1.PN4BM4 Arachis hypogaea HOM05D001163 ORTHO05D001769 2.8e-13 80.1 76 56.6
arahy.Tifrunner.gnm1.ann1.QNQ2AZ Arachis hypogaea HOM05D006376 ORTHO05D008046 1.4e-12 77.8 76 55.3
Dinv17636 Davidia involucrata HOM05D012663 ORTHO05D004533 1.9e-09 67.4 47 68.1
SMO137G0132 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 2.7e-08 63.5 81 44.4
SMO170G0025 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 1.9e-06 57.4 138 33.3
VMungo0647G1967 Vigna mungo HOM05D006376 ORTHO05D008046 7.3e-06 55.5 39 71.8


User provided reference genes

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