Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B00447 Eucalyptus grandis HOM05D015373 ORTHO05D013832 1.6e-241 839.0 416 100.0
Eucgr.B00464 Eucalyptus grandis HOM05D015373 ORTHO05D194259 1.2e-140 503.8 407 67.6
Eucgr.F00886 Eucalyptus grandis HOM05D000101 ORTHO05D000089 6.7e-54 215.7 421 37.1
Eucgr.F00831 Eucalyptus grandis HOM05D015373 ORTHO05D017888 6.0e-18 96.3 86 53.5
Eucgr.F00840 Eucalyptus grandis HOM05D015373 ORTHO05D017888 4.7e-15 86.7 94 42.6
Eucgr.F00903 Eucalyptus grandis HOM05D015373 ORTHO05D192503 6.8e-14 82.8 128 39.8
Eucgr.B00444 Eucalyptus grandis HOM05D000101 ORTHO05D000089 2.1e-10 71.2 44 81.8
Eucgr.E02343 Eucalyptus grandis HOM05D000306 ORTHO05D013319 4.6e-10 70.1 64 51.6
QL10p062237 Quercus lobata HOM05D000009 ORTHO05D000008 7.8e-10 69.3 62 48.4
PGR031G1790 Punica granatum HOM05D000023 ORTHO05D013319 1.0e-09 68.9 68 42.6
PGR119G2465 Punica granatum HOM05D000023 ORTHO05D013319 1.3e-09 68.6 64 48.4
PGR142G0116 Punica granatum HOM05D015373 ORTHO05D017888 3.0e-09 67.4 68 42.6
Eucgr.E02624 Eucalyptus grandis HOM05D000023 ORTHO05D013832 3.9e-09 67.0 84 42.9
QL10p043741 Quercus lobata HOM05D015373 ORTHO05D017888 3.9e-09 67.0 62 50.0
QL10p047249 Quercus lobata HOM05D000009 ORTHO05D000008 5.1e-09 66.6 96 38.5
QL10p047264 Quercus lobata HOM05D000009 ORTHO05D000008 5.1e-09 66.6 96 38.5
Eucgr.F00904 Eucalyptus grandis HOM05D000101 ORTHO05D000089 1.1e-08 65.5 68 52.9
QL02p029416 Quercus lobata HOM05D000023 ORTHO05D000014 1.1e-08 65.5 96 34.4
Eucgr.F01654 Eucalyptus grandis HOM05D028058 ORTHO05D029319 1.5e-08 65.1 55 61.8
QL10p066259 Quercus lobata HOM05D000009 ORTHO05D000008 1.5e-08 65.1 103 37.9
QL10p062588 Quercus lobata HOM05D000023 ORTHO05D000014 2.5e-08 64.3 102 32.4
PGR119G1879 Punica granatum HOM05D000023 ORTHO05D013319 4.3e-08 63.5 108 34.3
QL10p062902 Quercus lobata HOM05D000023 ORTHO05D000014 4.3e-08 63.5 96 33.3
QL10p064515 Quercus lobata HOM05D000009 ORTHO05D000008 4.3e-08 63.5 83 39.8
QL10p060986 Quercus lobata HOM05D000009 ORTHO05D000008 9.5e-08 62.4 95 40.0
QL10p062138 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-07 62.0 62 43.5
QL10p062985 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-07 62.0 62 43.5
QL10p066115 Quercus lobata HOM05D006297 ORTHO05D017888 1.2e-07 62.0 103 34.0
QL10p065955 Quercus lobata HOM05D000023 ORTHO05D000014 1.6e-07 61.6 96 33.3
QL10p065989 Quercus lobata HOM05D000009 ORTHO05D000008 1.6e-07 61.6 95 38.9
Potri.019G020500 Populus trichocarpa HOM05D000101 ORTHO05D000089 3.6e-07 60.5 83 38.6
QL02p019173 Quercus lobata HOM05D000009 ORTHO05D000008 3.6e-07 60.5 65 41.5
QL03p022208 Quercus lobata HOM05D000023 ORTHO05D000014 3.6e-07 60.5 96 32.3
QL10p059052 Quercus lobata HOM05D000009 ORTHO05D000008 3.6e-07 60.5 65 41.5
QL10p062952 Quercus lobata HOM05D000009 ORTHO05D000008 3.6e-07 60.5 101 35.6
PGR102G0493 Punica granatum HOM05D000101 ORTHO05D000089 4.7e-07 60.1 112 36.6
QL10p064883 Quercus lobata HOM05D000009 ORTHO05D000008 6.2e-07 59.7 65 46.2
QL10p061279 Quercus lobata HOM05D015373 ORTHO05D017888 8.1e-07 59.3 70 41.4
PGR031G3431 Punica granatum HOM05D000023 ORTHO05D013319 1.1e-06 58.9 68 39.7
Potri.019G013140 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.4e-06 58.5 96 34.4
TAR480G0001 Trochodendron aralioides HOM05D000023 ORTHO05D000014 1.4e-06 58.5 102 32.4
PGR102G0219 Punica granatum HOM05D000023 ORTHO05D013319 1.8e-06 58.2 92 34.8
PGR102G1530 Punica granatum HOM05D000577 ORTHO05D003509 1.8e-06 58.2 92 34.8
PGR119G0670 Punica granatum HOM05D000046 ORTHO05D013319 1.8e-06 58.2 100 34.0
PGR119G1743 Punica granatum HOM05D000046 ORTHO05D013319 1.8e-06 58.2 89 36.0
PGR102G1032 Punica granatum HOM05D000101 ORTHO05D000089 2.4e-06 57.8 172 33.1
QL10p064406 Quercus lobata HOM05D000009 ORTHO05D000008 3.1e-06 57.4 83 36.1
PSO765G0199 Papaver somniferum HOM05D000023 ORTHO05D000014 4.0e-06 57.0 85 34.1
Potri.018G137900 Populus trichocarpa HOM05D000101 ORTHO05D000089 4.0e-06 57.0 89 33.7
Potri.018G145558 Populus trichocarpa HOM05D000101 ORTHO05D000089 4.0e-06 57.0 64 43.8
Potri.T044600 Populus trichocarpa HOM05D000101 ORTHO05D000089 4.0e-06 57.0 83 39.8
Eucgr.G00077 Eucalyptus grandis HOM05D000101 ORTHO05D000089 5.2e-06 56.6 103 33.0
Potri.T046051 Populus trichocarpa HOM05D000101 ORTHO05D026078 5.2e-06 56.6 89 33.7
EL10Ac6g14082 Beta vulgaris HOM05D000023 ORTHO05D000014 6.8e-06 56.2 51 37.3
Eucgr.E02336 Eucalyptus grandis HOM05D000023 ORTHO05D013319 6.8e-06 56.2 86 36.0
PGR102G1278 Punica granatum HOM05D000101 ORTHO05D000089 6.8e-06 56.2 110 35.5
QL10p060013 Quercus lobata HOM05D000023 ORTHO05D000014 6.8e-06 56.2 51 49.0
EL10Ac1g02127 Beta vulgaris HOM05D000023 ORTHO05D000014 8.9e-06 55.8 43 44.2


User provided reference genes

Program Settings