Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B00425 Eucalyptus grandis HOM05D006349 ORTHO05D008205 4.7e-82 308.1 197 100.0
Gohir.A13G008300 Gossypium hirsutum HOM05D006349 ORTHO05D008205 7.1e-54 214.5 197 73.1
PGR083G1017 Punica granatum HOM05D006349 ORTHO05D008205 1.6e-53 213.4 202 74.3
CANSAT80G2583 Cannabis sativa HOM05D006349 ORTHO05D008205 2.1e-53 213.0 177 79.1
Manes.06G096400 Manihot esculenta HOM05D006349 ORTHO05D008205 2.1e-53 213.0 199 74.9
arahy.Tifrunner.gnm1.ann1.GD5F3R Arachis hypogaea HOM05D006349 ORTHO05D008205 4.6e-53 211.8 200 74.0
Gohir.D13G009000 Gossypium hirsutum HOM05D006349 ORTHO05D008205 4.6e-53 211.8 197 72.6
Gorai.013G009800 Gossypium raimondii HOM05D006349 ORTHO05D008205 4.6e-53 211.8 197 72.6
Duzib068G1139 Durio zibethinus HOM05D006349 ORTHO05D008205 3.9e-52 208.8 197 72.1
GSVIVG01008063001 Vitis vinifera HOM05D006349 ORTHO05D008205 5.1e-52 208.4 198 72.7
QL10p015567 Quercus lobata HOM05D006349 ORTHO05D008205 8.7e-52 207.6 197 72.6
TWI81G0140 Tripterygium wilfordii HOM05D006349 ORTHO05D008205 8.7e-52 207.6 196 71.9
Potri.012G070600 Populus trichocarpa HOM05D006349 ORTHO05D008205 1.5e-51 206.8 200 74.0
arahy.Tifrunner.gnm1.ann1.FR12T1 Arachis hypogaea HOM05D006349 ORTHO05D008205 3.3e-51 205.7 202 73.3
Glyma.04G174400 Glycine max HOM05D006349 ORTHO05D008205 1.3e-50 203.8 197 73.6
Hma1.2p1_0104F.1_g050210 Hydrangea macrophylla HOM05D006349 ORTHO05D008205 1.3e-50 203.8 199 71.4
Lalb_Chr08g0235931 Lupinus albus HOM05D006349 ORTHO05D008205 3.7e-50 202.2 197 72.6
Phvul.009G190100 Phaseolus vulgaris HOM05D006349 ORTHO05D008205 6.2e-50 201.4 199 72.9
Nitab4.5_0000785g0220 Nicotiana tabacum HOM05D006349 ORTHO05D008205 8.1e-50 201.1 164 79.3
HanXRQChr09g0271121 Helianthus annuus HOM05D006349 ORTHO05D008205 1.1e-49 200.7 164 80.5
Glyma.06G190300 Glycine max HOM05D006349 ORTHO05D008205 1.8e-49 199.9 192 73.4
Potri.015G065100 Populus trichocarpa HOM05D006349 ORTHO05D008205 1.8e-49 199.9 199 72.9
Cfa018991 Carpinus fangiana HOM05D006349 ORTHO05D008205 2.4e-49 199.5 189 73.0
Nitab4.5_0004605g0070 Nicotiana tabacum HOM05D006349 ORTHO05D008205 2.4e-49 199.5 164 78.7
Atru.chr9.2318 Acer truncatum HOM05D006349 ORTHO05D008205 9.0e-49 197.6 193 73.6
COL.COLO4_05705 Corchorus olitorius HOM05D006349 ORTHO05D008205 1.2e-48 197.2 197 70.6
ClCG01G014390 Citrullus lanatus HOM05D006349 ORTHO05D008205 2.0e-48 196.4 204 68.1
Cpa.g.sc17.203 Carica papaya HOM05D006349 ORTHO05D008205 3.4e-48 195.7 202 68.8
Ciclev10022359m.g Citrus clementina HOM05D006349 ORTHO05D008205 3.4e-48 195.7 197 69.5
CsaV3_1G007920 Cucumis sativus L. HOM05D006349 ORTHO05D008205 4.5e-48 195.3 206 68.0
Lj1g0000266 Lotus japonicus HOM05D006349 ORTHO05D008205 4.5e-48 195.3 202 71.3
vmacro19434 Vaccinium macrocarpon HOM05D006349 ORTHO05D008205 4.5e-48 195.3 154 83.8
CiPaw.11G038000 Carya illinoinensis HOM05D006349 ORTHO05D008205 7.6e-48 194.5 198 70.7
Psat7g112120 Pisum sativum HOM05D006349 ORTHO05D008205 1.0e-47 194.1 198 69.2
MELO3C002208.2 Cucumis melo HOM05D006349 ORTHO05D008205 1.3e-47 193.7 205 67.8
Nn4g23038 Nelumbo nucifera HOM05D006349 ORTHO05D008205 1.3e-47 193.7 191 71.2
AUR62021741 Chenopodium quinoa HOM05D006349 ORTHO05D008205 3.8e-47 192.2 196 70.9
MD06G1188100 Malus domestica HOM05D006349 ORTHO05D008205 3.8e-47 192.2 202 69.3
EL10Ac5g10944 Beta vulgaris HOM05D006349 ORTHO05D008205 6.5e-47 191.4 170 76.5
CSS0001294 Camellia sinensis var. sinensis HOM05D006349 ORTHO05D008205 1.9e-46 189.9 149 82.6
TPR.G11993 Trifolium pratense HOM05D006349 ORTHO05D008205 1.9e-46 189.9 172 75.0
Sabra15G0090500 Salix brachista HOM05D006349 ORTHO05D008205 2.5e-46 189.5 190 71.6
ECA232G0565 Erigeron canadensis HOM05D006349 ORTHO05D008205 3.2e-46 189.1 198 68.7
Oeu006473.1 Olea europaea HOM05D006349 ORTHO05D008205 3.2e-46 189.1 154 81.2
FAN04G0897 Fragaria x ananassa HOM05D006349 ORTHO05D008205 4.2e-46 188.7 166 77.7
RcHm_v2.0_Chr7g0180591 Rosa chinensis HOM05D006349 ORTHO05D008205 4.2e-46 188.7 201 68.2
Thecc.03G079100 Theobroma cacao HOM05D006349 ORTHO05D008205 4.2e-46 188.7 197 67.0
Ca_25734_v3 Cicer arietinum L. HOM05D006349 ORTHO05D008205 7.1e-46 188.0 197 68.5
Peaxi162Scf00009g00321 Petunia axillaris HOM05D006349 ORTHO05D008205 7.1e-46 188.0 164 74.4
PGSC0003DMG400025345 Solanum tuberosum HOM05D006349 ORTHO05D008205 7.1e-46 188.0 164 75.0
Actinidia37657 Actinidia chinensis HOM05D006349 ORTHO05D008205 1.2e-45 187.2 151 82.1
Dinv38665 Davidia involucrata HOM05D006349 ORTHO05D008205 1.6e-45 186.8 146 84.2
Solyc03g113240.3 Solanum lycopersicum HOM05D006349 ORTHO05D008205 2.1e-45 186.4 164 74.4
Sopen03g032300 Solanum pennellii HOM05D006349 ORTHO05D008205 2.1e-45 186.4 164 74.4
FAN13G0390 Fragaria x ananassa HOM05D006349 ORTHO05D008205 2.7e-45 186.0 197 69.0
Sp5g29850 Schrenkiella parvula HOM05D006349 ORTHO05D008205 3.5e-45 185.7 200 69.5
Sed0016194 Sechium edule HOM05D006349 ORTHO05D008205 4.6e-45 185.3 201 68.2
Sc12g0006210 Simmondsia chinensis HOM05D006349 ORTHO05D008205 6.0e-45 184.9 161 75.2
MBI19_g30284_MAGBIO Magnolia biondii HOM05D006349 ORTHO05D008205 7.9e-45 184.5 197 67.5
FvH4_5g15500 Fragaria vesca HOM05D006349 ORTHO05D008205 1.0e-44 184.1 199 67.3
BcaC08g46899 Brassica carinata HOM05D006349 ORTHO05D008205 1.3e-44 183.7 197 66.5
C06p48760 Brassica napus HOM05D006349 ORTHO05D008205 1.3e-44 183.7 197 66.5
BcaC03g15525 Brassica carinata HOM05D006349 ORTHO05D008205 1.8e-44 183.3 200 68.5
A07p40410 Brassica napus HOM05D006349 ORTHO05D008205 1.8e-44 183.3 197 67.0
C02p32090 Brassica napus HOM05D006349 ORTHO05D008205 1.8e-44 183.3 200 68.5
BraA02t06992Z Brassica rapa HOM05D006349 ORTHO05D008205 1.8e-44 183.3 197 67.0
ATR1120G128 Amborella trichopoda HOM05D006349 ORTHO05D008205 2.3e-44 183.0 195 65.1
BraA07t31583Z Brassica rapa HOM05D006349 ORTHO05D008205 2.3e-44 183.0 197 66.5
BolC6t39912H Brassica oleracea HOM05D006349 ORTHO05D008205 3.0e-44 182.6 197 66.5
FAN18G4547 Fragaria x ananassa HOM05D006349 ORTHO05D008205 3.0e-44 182.6 199 66.8
AUR62008355 Chenopodium quinoa HOM05D006349 ORTHO05D008205 3.9e-44 182.2 150 81.3
HPP92_022919 Vanilla planifolia HOM05D006349 ORTHO05D008205 3.9e-44 182.2 162 73.5
HPP92_022931 Vanilla planifolia HOM05D006349 ORTHO05D008205 3.9e-44 182.2 162 73.5
CAN.G999.48 Capsicum annuum HOM05D006349 ORTHO05D008205 5.1e-44 181.8 164 72.0
Zm00001eb160550 Zea mays HOM05D006349 ORTHO05D008205 5.1e-44 181.8 166 73.5
BolC2t09244H Brassica oleracea HOM05D006349 ORTHO05D008205 6.7e-44 181.4 200 67.5
Cc04_g15550 Coffea canephora HOM05D006349 ORTHO05D008205 6.7e-44 181.4 156 76.3
Hund02668 Selenicereus undatus HOM05D006349 ORTHO05D008205 1.1e-43 180.6 198 65.2
Lsat_1_v5_gn_4_107320 Lactuca sativa HOM05D006349 ORTHO05D008205 3.3e-43 179.1 196 66.8
Ah.02g113210 Amaranthus hybridus HOM05D006349 ORTHO05D008205 5.7e-43 178.3 148 78.4
AT1G74730 Arabidopsis thaliana HOM05D006349 ORTHO05D008205 5.7e-43 178.3 192 66.7
CARHR068050 Cardamine hirsuta HOM05D006349 ORTHO05D008205 1.3e-42 177.2 199 65.8
Lj9P459T48 Lonicera japonica HOM05D006349 ORTHO05D008205 1.6e-42 176.8 149 79.2
Carub.0002s2152 Capsella rubella HOM05D006349 ORTHO05D008205 2.1e-42 176.4 192 65.1
Migut.D01854 Erythranthe guttata HOM05D006349 ORTHO05D008205 2.1e-42 176.4 163 73.0
AL2G34620 Arabidopsis lyrata HOM05D006349 ORTHO05D008205 4.8e-42 175.3 191 65.4
BcaB05g24870 Brassica carinata HOM05D003553 ORTHO05D005072 6.2e-42 174.9 200 66.5
Medtr4g089080 Medicago truncatula HOM05D006349 ORTHO05D008205 1.1e-41 174.1 197 64.0
CDE07G1088 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 1.8e-41 173.3 197 64.0
Os01g0585300 Oryza sativa ssp. japonica HOM05D006349 ORTHO05D008205 1.8e-41 173.3 157 74.5
DCAR_015995 Daucus carota HOM05D006349 ORTHO05D008205 4.0e-41 172.2 199 62.3
Aqoxy3G03265 Aquilegia oxysepala HOM05D006349 ORTHO05D008205 5.3e-41 171.8 197 61.9
PSO781G0309 Papaver somniferum HOM05D006349 ORTHO05D008205 9.0e-41 171.0 197 61.4
Prupe.5G186300 Prunus persica HOM05D006349 ORTHO05D008205 9.0e-41 171.0 175 70.9
SalBow7G1566 Salvia bowleyana HOM05D006349 ORTHO05D008205 1.2e-40 170.6 156 73.1
MD14G1194200 Malus domestica HOM05D006349 ORTHO05D008205 4.5e-40 168.7 202 63.9
SGA_v2.0_scaffold7G04081 Striga asiatica HOM05D006349 ORTHO05D008205 1.3e-39 167.2 198 64.6
CDE04G3639 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 6.5e-39 164.9 197 61.9
TAR622G0703 Trochodendron aralioides HOM05D006349 ORTHO05D008205 1.9e-38 163.3 197 62.4
unitig_46.g18468 Utricularia gibba HOM05D006349 ORTHO05D008205 7.1e-38 161.4 196 60.2
MSTRG.4410 Avicennia marina HOM05D006349 ORTHO05D008205 9.3e-38 161.0 164 67.7
Thhalv10019168m.g Eutrema salsugineum HOM05D006349 ORTHO05D008205 4.6e-37 158.7 200 62.5
BcaC08g46920 Brassica carinata HOM05D006349 ORTHO05D008205 7.9e-37 157.9 132 79.5
Haze_07380 Corylus avellana HOM05D006349 ORTHO05D008205 5.1e-36 155.2 198 62.6
PSO541G4605 Papaver somniferum HOM05D006349 ORTHO05D008205 3.1e-33 146.0 197 54.8
Aa31LG4G4960 Aethionema arabicum HOM05D006349 ORTHO05D008205 5.3e-33 145.2 199 55.3
Pp3c20_23180 Physcomitrium patens HOM05D006349 ORTHO05D008205 5.1e-28 128.6 168 56.5
FAN08G2244 Fragaria x ananassa HOM05D006349 ORTHO05D008205 5.7e-27 125.2 197 54.8
SEGI_24937 Sequoiadendron giganteum HOM05D006349 ORTHO05D008205 5.3e-25 118.6 165 55.8
Actinidia04919 Actinidia chinensis HOM05D006349 ORTHO05D008205 3.8e-23 112.5 107 59.8
Mapoly0105s0011 Marchantia polymorpha HOM05D006349 ORTHO05D008205 2.7e-21 106.3 195 49.7
Pp3c25_12400 Physcomitrium patens HOM05D006349 ORTHO05D008205 8.8e-20 101.3 112 64.3
SMO340G0151 Selaginella moellendorffii HOM05D006349 ORTHO05D008205 8.8e-20 101.3 150 53.3
AagrBONN_evm.TU.Sc2ySwM_362.857 Anthoceros agrestis HOM05D006349 ORTHO05D008205 2.0e-19 100.1 191 47.6
SGA_v2.0_scaffold294G47475 Striga asiatica HOM05D006349 ORTHO05D008205 5.7e-19 98.6 127 52.8
A02p19550 Brassica napus HOM05D006349 ORTHO05D008205 1.3e-18 97.4 97 61.9
CARHR103880 Cardamine hirsuta HOM05D006349 ORTHO05D008205 5.3e-17 92.0 140 55.7
BcaC03g15526 Brassica carinata HOM05D006349 ORTHO05D008205 3.2e-14 82.8 110 53.6
CBR_g48703 Chara braunii HOM05D006349 ORTHO05D008205 4.2e-14 82.4 171 45.6
Nn8g40820 Nelumbo nucifera HOM05D006349 ORTHO05D008205 1.8e-12 77.0 119 52.1
Pp3c24_420 Physcomitrium patens HOM05D006349 ORTHO05D008205 9.1e-09 64.7 168 41.7


User provided reference genes

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