Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B00422 Eucalyptus grandis HOM05D005796 ORTHO05D007054 1.8e-146 522.7 285 100.0
TWI60G1143 Tripterygium wilfordii HOM05D005796 ORTHO05D007054 4.0e-74 282.3 162 85.2
FAN18G3372 Fragaria x ananassa HOM05D005796 ORTHO05D007054 5.8e-73 278.5 256 60.5
Duzib084G0674 Durio zibethinus HOM05D005796 ORTHO05D007054 9.9e-73 277.7 162 84.0
Manes.14G074300 Manihot esculenta HOM05D005796 ORTHO05D007054 9.9e-73 277.7 162 82.7
GSVIVG01008066001 Vitis vinifera HOM05D005796 ORTHO05D007054 1.3e-72 277.3 162 84.0
Dinv38663 Davidia involucrata HOM05D005796 ORTHO05D007054 1.7e-72 276.9 162 83.3
Thecc.03G078500 Theobroma cacao HOM05D005796 ORTHO05D007054 3.8e-72 275.8 162 84.6
Prupe.5G185800 Prunus persica HOM05D005796 ORTHO05D007054 1.9e-71 273.5 162 82.1
TAR481G0014 Trochodendron aralioides HOM05D005796 ORTHO05D007054 9.3e-71 271.2 162 82.1
FAN08G2559 Fragaria x ananassa HOM05D005796 ORTHO05D007054 1.6e-70 270.4 164 80.5
Gohir.A07G065400 Gossypium hirsutum HOM05D005796 ORTHO05D007054 2.1e-70 270.0 163 82.2
RcHm_v2.0_Chr7g0180561 Rosa chinensis HOM05D005796 ORTHO05D007054 2.1e-70 270.0 162 80.2
Ciclev10021819m.g Citrus clementina HOM05D005796 ORTHO05D007054 2.7e-70 269.6 162 81.5
Potri.015G065500 Populus trichocarpa HOM05D005796 ORTHO05D007054 2.7e-70 269.6 163 81.0
Atru.chr9.2321 Acer truncatum HOM05D005796 ORTHO05D007054 3.5e-70 269.2 163 82.2
CiPaw.11G037800 Carya illinoinensis HOM05D005796 ORTHO05D007054 3.5e-70 269.2 162 82.7
Gorai.001G073800 Gossypium raimondii HOM05D005796 ORTHO05D007054 3.5e-70 269.2 163 82.2
FAN13G2643 Fragaria x ananassa HOM05D005796 ORTHO05D007054 6.0e-70 268.5 162 79.6
FAN04G0326 Fragaria x ananassa HOM05D005796 ORTHO05D007054 7.8e-70 268.1 164 78.7
Oeu048731.1 Olea europaea HOM05D005796 ORTHO05D007054 3.0e-69 266.2 166 76.5
CANSAT80G0862 Cannabis sativa HOM05D005796 ORTHO05D007054 5.1e-69 265.4 162 80.9
Cpa.g.sc414.2 Carica papaya HOM05D005796 ORTHO05D007054 5.1e-69 265.4 162 81.5
Sabra15G0090700 Salix brachista HOM05D005796 ORTHO05D007054 5.1e-69 265.4 178 74.2
Actinidia04922 Actinidia chinensis HOM05D005796 ORTHO05D007054 1.1e-68 264.2 163 79.8
Sc12g0006170 Simmondsia chinensis HOM05D005796 ORTHO05D007054 7.3e-68 261.5 163 77.9
Peaxi162Scf00009g00426 Petunia axillaris HOM05D005796 ORTHO05D007054 1.6e-67 260.4 162 79.0
AUR62008352 Chenopodium quinoa HOM05D005796 ORTHO05D007054 2.1e-67 260.0 162 75.9
MD14G1193900 Malus domestica HOM05D005796 ORTHO05D007054 2.1e-67 260.0 162 78.4
Hma1.2p1_0002F.1_g003270 Hydrangea macrophylla HOM05D005796 ORTHO05D007054 2.8e-67 259.6 161 77.0
Migut.D01857 Erythranthe guttata HOM05D005796 ORTHO05D007054 3.6e-67 259.2 162 75.9
SGA_v2.0_scaffold7G04086 Striga asiatica HOM05D005796 ORTHO05D007054 3.6e-67 259.2 162 77.2
Cc04_g15610 Coffea canephora HOM05D005796 ORTHO05D007054 4.8e-67 258.8 162 77.8
Aa31LG11G960 Aethionema arabicum HOM05D005796 ORTHO05D007054 3.1e-66 256.1 162 73.5
MD06G1187500 Malus domestica HOM05D005796 ORTHO05D007054 4.0e-66 255.8 162 77.8
ECA247G3495 Erigeron canadensis HOM05D005796 ORTHO05D007054 5.3e-66 255.4 162 74.1
HanXRQChr02g0045201 Helianthus annuus HOM05D005796 ORTHO05D007054 5.3e-66 255.4 158 77.8
AT5G62720 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 6.9e-66 255.0 166 72.3
AL8G39690 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 9.0e-66 254.6 166 72.9
Carub.0008s2345 Capsella rubella HOM05D005796 ORTHO05D007054 9.0e-66 254.6 166 72.9
arahy.Tifrunner.gnm1.ann1.NXA9BP Arachis hypogaea HOM05D005796 ORTHO05D007054 1.2e-65 254.2 165 76.4
arahy.Tifrunner.gnm1.ann1.U2VSD4 Arachis hypogaea HOM05D005796 ORTHO05D007054 2.0e-65 253.4 165 76.4
EL10Ac5g10940 Beta vulgaris HOM05D005796 ORTHO05D007054 2.0e-65 253.4 163 74.2
Solyc03g113280.3 Solanum lycopersicum HOM05D005796 ORTHO05D007054 2.0e-65 253.4 158 77.2
MSTRG.4407 Avicennia marina HOM05D005796 ORTHO05D007054 3.4e-65 252.7 162 74.7
Hund02671 Selenicereus undatus HOM05D005796 ORTHO05D007054 3.4e-65 252.7 162 75.9
Nitab4.5_0004605g0110 Nicotiana tabacum HOM05D005796 ORTHO05D007054 4.5e-65 252.3 162 75.9
CARHR276510 Cardamine hirsuta HOM05D005796 ORTHO05D007054 5.8e-65 251.9 166 71.7
Carub.0005s1409 Capsella rubella HOM05D005796 ORTHO05D007054 9.9e-65 251.1 156 76.9
Sopen03g032340 Solanum pennellii HOM05D005796 ORTHO05D007054 9.9e-65 251.1 158 77.2
ClCG01G014370 Citrullus lanatus HOM05D005796 ORTHO05D007054 1.3e-64 250.8 162 77.2
BcaB02g09686 Brassica carinata HOM05D005796 ORTHO05D007054 2.9e-64 249.6 167 72.5
AT3G47980 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 3.8e-64 249.2 162 74.7
CARHR156700 Cardamine hirsuta HOM05D005796 ORTHO05D007054 3.8e-64 249.2 156 76.9
Nitab4.5_0005402g0010 Nicotiana tabacum HOM05D005796 ORTHO05D007054 3.8e-64 249.2 162 75.3
PSO017G2472 Papaver somniferum HOM05D005796 ORTHO05D007054 3.8e-64 249.2 158 76.6
AL5G27300 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 4.9e-64 248.8 162 74.1
PGSC0003DMG400025332 Solanum tuberosum HOM05D005796 ORTHO05D007054 1.1e-63 247.7 158 75.9
Lsat_1_v5_gn_1_10700 Lactuca sativa HOM05D005796 ORTHO05D007054 1.4e-63 247.3 170 71.8
MELO3C002210.2 Cucumis melo HOM05D005796 ORTHO05D007054 1.9e-63 246.9 162 76.5
Gohir.D07G069900 Gossypium hirsutum HOM05D005796 ORTHO05D007054 2.4e-63 246.5 163 77.9
BcaB02g09676 Brassica carinata HOM05D005796 ORTHO05D007054 3.2e-63 246.1 165 72.1
Sed0020047 Sechium edule HOM05D005796 ORTHO05D007054 3.2e-63 246.1 162 76.5
CsaV3_1G007940 Cucumis sativus L. HOM05D005796 ORTHO05D007054 4.2e-63 245.7 162 75.9
PSO478G3339 Papaver somniferum HOM05D005796 ORTHO05D007054 4.2e-63 245.7 158 75.9
Sp2g25890 Schrenkiella parvula HOM05D005796 ORTHO05D007054 4.2e-63 245.7 167 71.3
BcaNung01383 Brassica carinata HOM05D005796 ORTHO05D007054 5.4e-63 245.4 165 71.5
ATR0665G316 Amborella trichopoda HOM05D005796 ORTHO05D007054 7.1e-63 245.0 166 72.9
BraA06t25896Z Brassica rapa HOM05D005796 ORTHO05D007054 1.6e-62 243.8 167 70.1
DCAR_026077 Daucus carota HOM05D005796 ORTHO05D007054 1.6e-62 243.8 162 73.5
Sp5g14000 Schrenkiella parvula HOM05D005796 ORTHO05D007054 1.6e-62 243.8 154 76.0
A06p29510 Brassica napus HOM05D000012 ORTHO05D002455 2.7e-62 243.0 165 70.3
BcaB05g22893 Brassica carinata HOM05D005796 ORTHO05D007054 3.5e-62 242.7 156 75.0
C03p64010 Brassica napus HOM05D000012 ORTHO05D002455 3.5e-62 242.7 165 70.3
A09p07830 Brassica napus HOM05D005796 ORTHO05D007054 4.6e-62 242.3 167 70.7
BraA09t36434Z Brassica rapa HOM05D005796 ORTHO05D007054 4.6e-62 242.3 167 70.7
vmacro19431 Vaccinium macrocarpon HOM05D005796 ORTHO05D007054 4.6e-62 242.3 214 61.2
Thhalv10004798m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 7.9e-62 241.5 165 70.3
Lalb_Chr13g0303431 Lupinus albus HOM05D005796 ORTHO05D007054 7.9e-62 241.5 162 72.2
BcaC04g23395 Brassica carinata HOM05D005796 ORTHO05D007054 1.8e-61 240.4 167 70.7
A01p25720 Brassica napus HOM05D005796 ORTHO05D007054 2.3e-61 240.0 156 73.7
BcaC01g02511 Brassica carinata HOM05D005796 ORTHO05D007054 3.0e-61 239.6 167 69.5
BolC3t18656H Brassica oleracea HOM05D005796 ORTHO05D007054 3.0e-61 239.6 167 69.5
THA.LOC104821456 Tarenaya hassleriana HOM05D005796 ORTHO05D007054 5.1e-61 238.8 158 72.2
C01p32410 Brassica napus HOM05D005796 ORTHO05D007054 6.7e-61 238.4 156 73.7
BolC1t03180H Brassica oleracea HOM05D005796 ORTHO05D007054 6.7e-61 238.4 156 73.7
BraA01t02488Z Brassica rapa HOM05D005796 ORTHO05D007054 6.7e-61 238.4 156 73.1
MBI03_g20464_MAGBIO Magnolia biondii HOM05D005796 ORTHO05D007054 1.5e-60 237.3 155 76.1
PGR083G2169 Punica granatum HOM05D005796 ORTHO05D007054 1.9e-60 236.9 146 82.2
Aqoxy3G00785 Aquilegia oxysepala HOM05D005796 ORTHO05D007054 2.5e-60 236.5 163 71.8
Phvul.003G193000 Phaseolus vulgaris HOM05D005796 ORTHO05D007054 2.5e-60 236.5 163 68.1
Ca_21851_v3 Cicer arietinum L. HOM05D005796 ORTHO05D007054 3.3e-60 236.1 163 69.9
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 7.4e-60 235.0 159 68.6
BolC9t53794H Brassica oleracea HOM05D005796 ORTHO05D007054 9.6e-60 234.6 164 69.5
Glyma.17G096600 Glycine max HOM05D005796 ORTHO05D007054 2.1e-59 233.4 163 68.1
Haze_07383 Corylus avellana HOM05D005796 ORTHO05D007054 2.8e-59 233.0 234 58.5
VMungo1215G0702 Vigna mungo HOM05D005796 ORTHO05D007054 2.8e-59 233.0 163 68.1
A06p19660 Brassica napus HOM05D005796 ORTHO05D007054 3.7e-59 232.6 151 74.2
BraA06t25046Z Brassica rapa HOM05D005796 ORTHO05D007054 1.1e-58 231.1 156 71.8
unitig_0.g783 Utricularia gibba HOM05D005796 ORTHO05D007054 1.4e-58 230.7 157 70.7
CDE02G2117 Ceratophyllum demersum HOM05D005796 ORTHO05D007054 1.8e-58 230.3 162 69.1
TPR.G38380 Trifolium pratense HOM05D005796 ORTHO05D007054 2.0e-57 226.9 163 65.6
Lj4g0017253 Lotus japonicus HOM05D005796 ORTHO05D007054 4.9e-56 222.2 163 65.0
Medtr4g107630 Medicago truncatula HOM05D005796 ORTHO05D007054 1.1e-55 221.1 163 66.3
AUR62021745 Chenopodium quinoa HOM05D005796 ORTHO05D007054 1.6e-54 217.2 130 80.0
Os03g0684700 Oryza sativa ssp. japonica HOM05D005796 ORTHO05D007054 2.1e-54 216.9 140 73.6
SEGI_40570 Sequoiadendron giganteum HOM05D005796 ORTHO05D007054 8.7e-53 211.5 159 62.9
COL.COLO4_37386 Corchorus olitorius HOM05D005796 ORTHO05D007054 1.1e-52 211.1 126 84.1
PGR083G0992 Punica granatum HOM05D005796 ORTHO05D007054 4.0e-50 202.6 128 80.5
Zm00001eb217240 Zea mays HOM05D005796 ORTHO05D007054 4.0e-50 202.6 156 65.4
Thhalv10010656m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 4.5e-49 199.1 127 78.7
C09p08810 Brassica napus HOM05D005796 ORTHO05D007054 7.6e-49 198.4 144 70.8
SalBow7G0869 Salvia bowleyana HOM05D005796 ORTHO05D007054 3.8e-48 196.1 126 75.4
Lj9A459G48 Lonicera japonica HOM05D005796 ORTHO05D007054 2.5e-47 193.4 127 75.6
Aa31LG4G16620 Aethionema arabicum HOM05D005796 ORTHO05D007054 5.5e-47 192.2 118 78.0
BcaB01g00857 Brassica carinata HOM05D005796 ORTHO05D007054 1.0e-45 188.0 120 76.7
BcaC09g49836 Brassica carinata HOM05D005796 ORTHO05D007054 5.1e-45 185.7 120 75.8
BcaNung07157 Brassica carinata HOM05D005796 ORTHO05D007054 5.1e-45 185.7 120 75.8
SMO356G0151 Selaginella moellendorffii HOM05D005796 ORTHO05D007054 4.3e-44 182.6 147 58.5
Mapoly0029s0058 Marchantia polymorpha HOM05D005796 ORTHO05D007054 8.5e-40 168.3 145 51.7
Sabra12G0050500 Salix brachista HOM05D005796 ORTHO05D007054 7.9e-38 161.8 170 54.7
AagrBONN_evm.TU.Sc2ySwM_228.2536 Anthoceros agrestis HOM05D005796 ORTHO05D007054 2.3e-37 160.2 145 53.8
QL10p015509 Quercus lobata HOM05D005796 ORTHO05D007054 2.2e-35 153.7 82 90.2
Zm00001eb053360 Zea mays HOM05D005796 ORTHO05D007054 1.4e-34 151.0 109 68.8
CAN.G4519.1 Capsicum annuum HOM05D005796 ORTHO05D007054 9.1e-34 148.3 88 78.4
FvH4_5g15530 Fragaria vesca HOM05D005796 ORTHO05D007054 1.5e-25 120.9 169 46.2
QL10p015507 Quercus lobata HOM05D005796 ORTHO05D007054 5.9e-25 119.0 77 77.9
Sed0018874 Sechium edule HOM05D005796 ORTHO05D007054 1.4e-21 107.8 83 68.7
Nn4g23032 Nelumbo nucifera HOM05D005796 ORTHO05D007054 1.0e-16 91.7 103 49.5
Glyma.05G030200 Glycine max HOM05D005796 ORTHO05D007054 1.2e-12 78.2 50 70.0
MCO14G168 Micromonas commoda HOM05D005796 ORTHO05D007054 7.0e-10 68.9 134 29.1
Rhsim08G0160200 Rhododendron simsii HOM05D005796 ORTHO05D007054 4.5e-09 66.2 47 68.1


User provided reference genes

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