Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B00368 Eucalyptus grandis HOM05D006935 ORTHO05D008944 3.4e-175 618.2 317 100.0
PGR083G2867 Punica granatum HOM05D006935 ORTHO05D008944 1.0e-123 447.2 303 75.6
CiPaw.11G027700 Carya illinoinensis HOM05D006935 ORTHO05D008944 1.8e-123 446.4 273 82.4
PGSC0003DMG400024494 Solanum tuberosum HOM05D006935 ORTHO05D008944 3.1e-123 445.7 277 79.1
FvH4_5g05200 Fragaria vesca HOM05D006935 ORTHO05D008944 3.4e-122 442.2 269 83.6
Cpa.g.sc124.48 Carica papaya HOM05D006935 ORTHO05D008944 4.9e-121 438.3 299 76.6
RcHm_v2.0_Chr7g0193711 Rosa chinensis HOM05D006935 ORTHO05D008944 6.4e-121 438.0 302 74.8
Solyc03g114250.4 Solanum lycopersicum HOM05D006935 ORTHO05D008944 6.4e-121 438.0 269 80.3
Actinidia19311 Actinidia chinensis HOM05D006935 ORTHO05D008944 8.3e-121 437.6 269 80.7
Potri.015G074700 Populus trichocarpa HOM05D006935 ORTHO05D008944 8.3e-121 437.6 272 81.6
MD14G1182500 Malus domestica HOM05D006935 ORTHO05D008944 1.1e-120 437.2 279 79.2
QL10p011920 Quercus lobata HOM05D006935 ORTHO05D008944 1.1e-120 437.2 267 83.1
Sabra15G0098700 Salix brachista HOM05D006935 ORTHO05D008944 1.1e-120 437.2 303 74.9
Sopen03g033350 Solanum pennellii HOM05D006935 ORTHO05D008944 1.9e-120 436.4 274 78.5
Ciclev10021410m.g Citrus clementina HOM05D006935 ORTHO05D008944 3.2e-120 435.6 303 74.9
Haze_07457 Corylus avellana HOM05D006935 ORTHO05D008944 1.2e-119 433.7 295 75.9
Thecc.03G010500 Theobroma cacao HOM05D006935 ORTHO05D008944 4.6e-119 431.8 301 74.8
vmacro19376 Vaccinium macrocarpon HOM05D006935 ORTHO05D008944 7.8e-119 431.0 269 78.4
MSTRG.11442 Avicennia marina HOM05D006935 ORTHO05D008944 1.0e-118 430.6 318 69.8
Nitab4.5_0005862g0020 Nicotiana tabacum HOM05D006935 ORTHO05D008944 2.3e-118 429.5 342 67.0
Atru.chr9.2451 Acer truncatum HOM05D006935 ORTHO05D008944 3.0e-118 429.1 297 75.4
CSS0041391 Camellia sinensis var. sinensis HOM05D006935 ORTHO05D008944 3.9e-118 428.7 269 79.6
Cc04_g13740 Coffea canephora HOM05D006935 ORTHO05D008944 3.9e-118 428.7 285 77.2
Duzib068G1137 Durio zibethinus HOM05D006935 ORTHO05D008944 3.9e-118 428.7 270 81.1
GSVIVG01007766001 Vitis vinifera HOM05D006935 ORTHO05D008944 8.6e-118 427.6 267 80.1
Manes.06G104000 Manihot esculenta HOM05D006935 ORTHO05D008944 1.1e-117 427.2 270 78.1
Gorai.007G001900 Gossypium raimondii HOM05D006935 ORTHO05D008944 1.5e-117 426.8 298 73.5
COL.COLO4_04599 Corchorus olitorius HOM05D006935 ORTHO05D008944 2.5e-117 426.0 306 74.2
Rhsim08G0171100 Rhododendron simsii HOM05D006935 ORTHO05D008944 2.5e-117 426.0 281 74.7
TWI81G0925 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 3.3e-117 425.6 297 74.4
TWI81G0947 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 3.3e-117 425.6 297 74.4
ECA236G1157 Erigeron canadensis HOM05D006935 ORTHO05D008944 1.2e-116 423.7 285 77.2
Gohir.D11G001000 Gossypium hirsutum HOM05D006935 ORTHO05D008944 1.2e-116 423.7 300 73.3
SalBow5G1860 Salvia bowleyana HOM05D006935 ORTHO05D008944 1.6e-116 423.3 300 72.3
SGA_v2.0_scaffold90G27953 Striga asiatica HOM05D006935 ORTHO05D008944 1.6e-116 423.3 278 77.3
Nn4g22789 Nelumbo nucifera HOM05D006935 ORTHO05D008944 2.1e-116 422.9 303 73.3
Lsat_1_v5_gn_5_17180 Lactuca sativa HOM05D006935 ORTHO05D008944 8.1e-116 421.0 325 66.8
Gohir.A11G001400 Gossypium hirsutum HOM05D006935 ORTHO05D008944 1.4e-115 420.2 300 72.7
HanXRQChr16g0517271 Helianthus annuus HOM05D006935 ORTHO05D008944 1.4e-115 420.2 278 76.6
Lalb_Chr07g0182691 Lupinus albus HOM05D006935 ORTHO05D008944 8.9e-115 417.5 245 81.2
FAN04G2667 Fragaria x ananassa HOM05D006935 ORTHO05D008944 2.0e-114 416.4 257 82.9
VMungo1215G2532 Vigna mungo HOM05D006935 ORTHO05D008944 2.0e-114 416.4 241 84.2
BcaB02g09696 Brassica carinata HOM05D006935 ORTHO05D008944 3.4e-114 415.6 296 73.3
Migut.I00022 Erythranthe guttata HOM05D006935 ORTHO05D008944 3.4e-114 415.6 239 84.1
Lj4g0026943 Lotus japonicus HOM05D006935 ORTHO05D008944 3.4e-114 415.6 264 78.4
Cfa019105 Carpinus fangiana HOM05D006935 ORTHO05D004872 4.4e-114 415.2 300 73.7
BcaC01g02525 Brassica carinata HOM05D006935 ORTHO05D008944 5.8e-114 414.8 294 72.8
C03p63900 Brassica napus HOM05D006935 ORTHO05D008944 5.8e-114 414.8 294 72.8
BolC3t18645H Brassica oleracea HOM05D006935 ORTHO05D008944 5.8e-114 414.8 294 72.8
THA.LOC104798977 Tarenaya hassleriana HOM05D006935 ORTHO05D008944 5.8e-114 414.8 265 78.5
Nitab4.5_0000852g0050 Nicotiana tabacum HOM05D006935 ORTHO05D008944 7.5e-114 414.5 300 72.0
Phvul.003G199600 Phaseolus vulgaris HOM05D006935 ORTHO05D008944 9.8e-114 414.1 288 73.6
CsaV3_1G008420 Cucumis sativus L. HOM05D006935 ORTHO05D008944 1.3e-113 413.7 304 69.7
Thhalv10004703m.g Eutrema salsugineum HOM05D006935 ORTHO05D008944 2.2e-113 412.9 266 77.8
FAN18G4193 Fragaria x ananassa HOM05D006935 ORTHO05D004872 2.2e-113 412.9 258 81.8
CANSAT80G0279 Cannabis sativa HOM05D006935 ORTHO05D008944 4.9e-113 411.8 247 81.8
A06p29590 Brassica napus HOM05D006935 ORTHO05D008944 6.4e-113 411.4 294 72.1
TPR.G37522 Trifolium pratense HOM05D006935 ORTHO05D008944 8.3e-113 411.0 268 76.1
Aa31LG11G860 Aethionema arabicum HOM05D006935 ORTHO05D008944 1.1e-112 410.6 265 77.0
Glyma.05G036900 Glycine max HOM05D006935 ORTHO05D008944 1.1e-112 410.6 269 76.6
BraA06t25905Z Brassica rapa HOM05D006935 ORTHO05D008944 2.4e-112 409.5 294 71.8
AL8G39840 Arabidopsis lyrata HOM05D006935 ORTHO05D008944 3.2e-112 409.1 303 70.0
Carub.0008s2355 Capsella rubella HOM05D006935 ORTHO05D008944 3.2e-112 409.1 299 70.9
Sc12g0005390 Simmondsia chinensis HOM05D006935 ORTHO05D008944 3.2e-112 409.1 268 77.6
Sp2g25990 Schrenkiella parvula HOM05D006935 ORTHO05D008944 9.2e-112 407.5 300 70.7
AT5G62840 Arabidopsis thaliana HOM05D006935 ORTHO05D008944 6.0e-111 404.8 265 76.6
CARHR276620 Cardamine hirsuta HOM05D006935 ORTHO05D008944 6.0e-111 404.8 297 70.4
Medtr4g106970 Medicago truncatula HOM05D006935 ORTHO05D008944 7.8e-111 404.4 268 75.0
Aqoxy3G02966 Aquilegia oxysepala HOM05D006935 ORTHO05D008944 3.0e-110 402.5 269 76.6
MBI16_g05651_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 1.5e-109 400.2 230 83.9
ClCG01G013080 Citrullus lanatus HOM05D006935 ORTHO05D008944 1.9e-109 399.8 289 72.7
TAR622G0425 Trochodendron aralioides HOM05D006935 ORTHO05D008944 3.3e-109 399.1 230 84.8
MELO3C002259.2 Cucumis melo HOM05D006935 ORTHO05D008944 1.6e-108 396.7 255 78.0
MBI16_g32800_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 8.1e-108 394.4 308 68.2
unitig_749.g13472 Utricularia gibba HOM05D006935 ORTHO05D008944 1.4e-107 393.7 299 68.2
Dinv09149 Davidia involucrata HOM05D006935 ORTHO05D008944 5.2e-107 391.7 272 74.3
Ah.02g110460 Amaranthus hybridus HOM05D006935 ORTHO05D008944 2.6e-106 389.4 236 78.0
CAN.G781.17 Capsicum annuum HOM05D006935 ORTHO05D008944 7.1e-104 381.3 257 76.3
AUR62008221 Chenopodium quinoa HOM05D006935 ORTHO05D008944 9.2e-104 380.9 239 79.1
Os01g0660900 Oryza sativa ssp. japonica HOM05D006935 ORTHO05D008944 2.1e-103 379.8 236 77.5
Hund09430 Selenicereus undatus HOM05D006935 ORTHO05D004872 7.8e-103 377.9 277 71.1
EL10Ac5g10748 Beta vulgaris HOM05D006935 ORTHO05D008944 1.0e-102 377.5 223 80.3
PSO302G0172 Papaver somniferum HOM05D006935 ORTHO05D008944 2.3e-102 376.3 302 65.2
Oeu016368.1 Olea europaea HOM05D006935 ORTHO05D008944 6.6e-102 374.8 281 70.1
Zm00001eb359580 Zea mays HOM05D006935 ORTHO05D008944 8.6e-102 374.4 300 65.0
Peaxi162Scf00017g02821 Petunia axillaris HOM05D006935 ORTHO05D008944 4.3e-101 372.1 238 78.2
CDE04G2457 Ceratophyllum demersum HOM05D005049 ORTHO05D004872 4.4e-98 362.1 259 70.3
HPP92_024712 Vanilla planifolia HOM05D006935 ORTHO05D008944 2.9e-97 359.4 266 69.5
AUR62030975 Chenopodium quinoa HOM05D006935 ORTHO05D008944 8.4e-97 357.8 241 73.9
SEGI_12501 Sequoiadendron giganteum HOM05D006935 ORTHO05D008944 9.3e-96 354.4 246 68.3
Ca_21910_v3 Cicer arietinum L. HOM05D006935 ORTHO05D008944 8.7e-94 347.8 254 70.1
Psat4g057680 Pisum sativum HOM05D006935 ORTHO05D008944 1.5e-93 347.1 256 71.1
Pp3c16_7000 Physcomitrium patens HOM05D006935 ORTHO05D008944 2.0e-90 336.7 241 68.0
FAN08G3443 Fragaria x ananassa HOM05D006935 ORTHO05D004872 1.1e-83 314.3 205 79.5
Mapoly0091s0071 Marchantia polymorpha HOM05D006935 ORTHO05D008944 1.1e-83 314.3 276 58.0
Peaxi162Scf00017g02830 Petunia axillaris HOM05D006935 ORTHO05D008944 1.8e-83 313.5 209 76.6
ATR0730G238 Amborella trichopoda HOM05D006935 ORTHO05D008944 5.5e-80 302.0 277 58.8
SMO141G0200 Selaginella moellendorffii HOM05D006935 ORTHO05D008944 5.8e-74 282.0 182 75.8
AagrBONN_evm.TU.Sc2ySwM_117.38 Anthoceros agrestis HOM05D006935 ORTHO05D008944 3.5e-71 272.7 193 71.0
EL10Ac5g10761 Beta vulgaris HOM05D006935 ORTHO05D008944 6.0e-71 271.9 219 65.3
Prupe.5G175000 Prunus persica HOM05D006935 ORTHO05D008944 2.6e-66 256.5 301 51.2
Hma1.2p1_0176F.1_g077560 Hydrangea macrophylla HOM05D006935 ORTHO05D008944 3.3e-61 239.6 162 73.5
Cre06.g272300 Chlamydomonas reinhardtii HOM05D006935 ORTHO05D008944 1.1e-56 224.6 269 48.7
Sed0005822 Sechium edule HOM05D006935 ORTHO05D008944 5.5e-56 222.2 163 70.6
arahy.Tifrunner.gnm1.ann1.0F4FSZ Arachis hypogaea HOM05D006935 ORTHO05D008944 7.7e-50 201.8 113 83.2
arahy.Tifrunner.gnm1.ann1.209TGD Arachis hypogaea HOM05D006935 ORTHO05D008944 1.7e-49 200.7 115 80.9
Actinidia20183 Actinidia chinensis HOM05D006935 ORTHO05D008944 1.1e-48 198.0 117 83.8
Psat4g057640 Pisum sativum HOM05D006935 ORTHO05D008944 1.4e-43 181.0 218 48.2
Lj5C123T7 Lonicera japonica HOM05D006935 ORTHO05D008944 2.9e-41 173.3 109 76.1
MD06G1175700 Malus domestica HOM05D006935 ORTHO05D008944 1.8e-35 154.1 221 43.9
Lj5C123T8 Lonicera japonica HOM05D006935 ORTHO05D008944 1.9e-32 144.1 77 88.3
PRCOL_00001554 Prasinoderma coloniale HOM05D006935 ORTHO05D008944 1.2e-23 114.8 210 37.6
MCO16G270 Micromonas commoda HOM05D006935 ORTHO05D008944 3.5e-18 96.7 237 32.5
Actinidia01759 Actinidia chinensis HOM05D006935 ORTHO05D008944 4.5e-18 96.3 63 76.2
Hund09427 Selenicereus undatus HOM05D006935 ORTHO05D008944 3.0e-09 67.0 44 72.7
Cre13.g564000 Chlamydomonas reinhardtii HOM05D006820 ORTHO05D008526 3.3e-08 63.5 205 28.8
PGSC0003DMG400014660 Solanum tuberosum HOM05D006820 ORTHO05D008526 3.6e-07 60.1 226 28.3
Nn4g24775 Nelumbo nucifera HOM05D006935 ORTHO05D008944 1.1e-06 58.5 33 75.8
Os04g0224600 Oryza sativa ssp. japonica HOM05D006820 ORTHO05D008526 1.1e-06 58.5 229 26.6
Sopen01g054210 Solanum pennellii HOM05D006820 ORTHO05D008526 4.0e-06 56.6 226 27.4
FAN24G1561 Fragaria x ananassa HOM05D006820 ORTHO05D008526 5.2e-06 56.2 179 30.7
CSS0042496 Camellia sinensis var. sinensis HOM05D006820 ORTHO05D008526 6.8e-06 55.8 231 27.3
FvH4_2g16540 Fragaria vesca HOM05D006820 ORTHO05D008526 8.9e-06 55.5 179 30.7
FAN15G1990 Fragaria x ananassa HOM05D006820 ORTHO05D008526 8.9e-06 55.5 182 30.2
Solyc01g112160.4 Solanum lycopersicum HOM05D006820 ORTHO05D008526 8.9e-06 55.5 226 27.4


User provided reference genes

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