Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 0.0e+00 2144.4 1092 100.0
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 1.5e-294 1016.5 1146 52.1
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 4.0e-271 938.7 1157 49.8
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 1.6e-264 916.8 1095 48.8
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 5.2e-263 911.8 1184 48.3
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 5.7e-262 908.3 1141 48.4
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.8e-260 903.3 1141 48.2
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 1.2e-259 900.6 1167 47.3
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 8.6e-258 894.4 1134 47.0
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 1.1e-257 894.0 1180 48.6
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.3e-257 892.5 1145 47.3
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 1.8e-255 886.7 1138 47.6
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 3.0e-255 885.9 1115 48.3
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 9.8e-254 880.9 1215 46.3
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 9.8e-254 880.9 1162 47.4
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 1.8e-252 876.7 1118 47.8
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 2.4e-252 876.3 1119 49.3
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 2.7e-251 872.8 1111 48.1
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 1.5e-249 867.1 1172 46.2
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 3.3e-249 865.9 1113 48.4
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 2.6e-246 856.3 1083 48.6
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 7.5e-246 854.7 1196 44.8
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 4.9e-245 852.0 1174 45.6
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 8.3e-245 851.3 1118 46.2
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 1.9e-244 850.1 1066 48.3
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 4.1e-244 849.0 1117 46.3
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 5.4e-244 848.6 1201 45.1
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 9.2e-244 847.8 1092 47.8
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 6.0e-243 845.1 1179 46.4
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 5.6e-241 838.6 1217 44.6
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 1.8e-239 833.6 1175 44.5
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 7.5e-238 828.2 1185 44.7
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.4e-231 807.4 974 49.2
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 5.8e-230 802.0 1173 44.6
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 6.4e-229 798.5 1134 45.8
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 4.1e-228 795.8 1148 44.8
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 7.8e-227 791.6 1076 45.8
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 1.5e-222 777.3 1217 42.7
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 1.4e-220 770.8 1081 46.4
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 4.2e-220 769.2 1176 43.7
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 7.1e-220 768.5 1175 43.6
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 7.1e-220 768.5 1167 44.0
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 3.5e-219 766.1 898 49.4
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 4.6e-219 765.8 1149 42.8
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 4.6e-219 765.8 1145 44.2
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 1.9e-217 760.4 1104 43.9
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 5.6e-217 758.8 1051 46.1
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 9.6e-217 758.1 1074 45.8
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 1.2e-214 751.1 1070 44.0
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 1.5e-214 750.7 1066 44.7
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 2.6e-214 750.0 1127 42.9
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 6.4e-213 745.3 1074 44.3
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 1.9e-212 743.8 1064 44.1
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 3.2e-212 743.0 1172 43.0
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 1.2e-211 741.1 1140 42.8
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 1.3e-210 737.6 1123 41.9
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 1.1e-209 734.6 1083 45.2
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 1.1e-207 728.0 1120 43.4
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 5.3e-207 725.7 1100 43.7
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 5.3e-207 725.7 1076 43.1
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 1.2e-206 724.5 1095 42.6
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 1.2e-206 724.5 1069 43.6
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 1.5e-206 724.2 1141 42.7
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 5.8e-206 722.2 1152 42.7
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 7.6e-206 721.8 1152 41.8
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 7.6e-206 721.8 563 62.7
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 1.3e-205 721.1 1087 42.8
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 1.9e-204 717.2 562 63.2
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.9e-204 717.2 1130 41.5
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 2.1e-203 713.8 1137 42.2
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 7.9e-203 711.8 1156 41.4
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 2.3e-202 710.3 1124 43.9
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 8.7e-202 708.4 1105 42.4
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 1.1e-201 708.0 989 45.3
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 2.5e-201 706.8 1081 41.6
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 4.3e-201 706.1 1000 43.5
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 7.4e-201 705.3 1074 42.5
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 1.3e-200 704.5 1075 42.4
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 3.7e-200 703.0 1177 41.1
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 3.7e-200 703.0 1075 42.3
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 4.8e-200 702.6 1155 40.8
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 1.8e-199 700.7 1160 40.9
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 3.4e-198 696.4 909 44.9
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 4.5e-198 696.0 1016 44.6
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 5.8e-198 695.7 944 44.8
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 1.0e-197 694.9 1062 42.6
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 8.4e-197 691.8 1054 43.9
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 3.5e-195 686.4 1063 43.2
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 3.9e-194 682.9 1030 43.1
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 8.2e-192 675.2 1060 42.4
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 9.3e-188 661.8 947 43.5
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 4.8e-184 649.4 1143 39.1
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 3.0e-178 630.2 1177 37.4
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 8.8e-178 628.6 939 42.3
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 8.2e-176 622.1 1015 39.7
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 2.0e-174 617.5 1128 38.9
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 2.6e-169 600.5 581 53.2
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 4.2e-164 583.2 1189 36.9
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 7.2e-164 582.4 1029 39.7
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 6.3e-160 569.3 733 45.6
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 3.7e-144 516.9 928 39.2
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 2.9e-128 464.2 1130 32.7
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 9.2e-127 459.1 419 55.8
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.2e-123 448.7 514 48.4
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 3.6e-123 447.2 317 68.8
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 4.0e-122 443.7 865 37.7
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 8.6e-117 426.0 575 41.9
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 1.1e-116 425.6 552 43.5
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 2.8e-115 421.0 506 43.5
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 4.4e-113 413.7 923 35.4
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 4.4e-113 413.7 786 36.3
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 7.6e-113 412.9 744 35.2
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 1.3e-112 412.1 595 40.8
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 1.9e-92 345.1 741 36.8
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 1.7e-72 278.9 229 66.4
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 7.9e-70 270.0 697 33.1
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 1.8e-66 258.8 227 59.5
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 4.1e-66 257.7 700 34.1
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 5.2e-29 134.4 277 33.6
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 2.3e-21 109.0 209 34.4
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 2.0e-20 105.9 80 67.5
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 1.3e-19 103.2 125 52.8
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 1.8e-18 99.4 419 30.5
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 3.2e-18 98.6 119 46.2
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 5.4e-18 97.8 566 27.4
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 2.0e-17 95.9 69 65.2
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 1.3e-16 93.2 57 68.4
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 2.3e-16 92.4 94 50.0
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 3.9e-16 91.7 51 76.5
FAN04G1664 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.3e-15 88.6 113 49.6
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 5.6e-15 87.8 55 69.1
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 5.2e-13 81.3 174 36.2
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 7.0e-10 70.9 154 37.0


User provided reference genes

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