Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B00218 Eucalyptus grandis HOM05D007505 ORTHO05D009476 6.9e-84 313.9 158 100.0
Cc04_g11490 Coffea canephora HOM05D007505 ORTHO05D009476 1.9e-33 146.4 151 53.0
Oeu023645.1 Olea europaea HOM05D007505 ORTHO05D009476 1.6e-32 143.3 139 57.6
Potri.015G084200 Populus trichocarpa HOM05D007505 ORTHO05D009476 1.6e-32 143.3 156 52.6
Ciclev10022689m.g Citrus clementina HOM05D007505 ORTHO05D009476 2.1e-32 142.9 143 58.0
Prupe.5G165400 Prunus persica HOM05D007505 ORTHO05D009476 2.1e-32 142.9 148 56.1
Migut.O00159 Erythranthe guttata HOM05D007505 ORTHO05D009476 6.1e-32 141.4 154 51.3
Dinv38525 Davidia involucrata HOM05D007505 ORTHO05D009476 1.8e-31 139.8 145 55.2
PGR083G2149 Punica granatum HOM05D007505 ORTHO05D009476 3.0e-31 139.0 148 54.7
Nitab4.5_0010452g0040 Nicotiana tabacum HOM05D002460 ORTHO05D002716 4.0e-31 138.7 132 57.6
CAN.G338.34 Capsicum annuum HOM05D007505 ORTHO05D009476 5.2e-31 138.3 144 54.2
Cfa019219 Carpinus fangiana HOM05D007505 ORTHO05D009476 2.0e-30 136.3 144 52.1
Cfa019221 Carpinus fangiana HOM05D007505 ORTHO05D009476 2.0e-30 136.3 144 52.1
Haze_07589 Corylus avellana HOM05D007505 ORTHO05D009476 2.0e-30 136.3 134 57.5
Peaxi162Scf00089g01341 Petunia axillaris HOM05D002460 ORTHO05D002716 3.4e-30 135.6 147 53.1
Solyc03g112190.4 Solanum lycopersicum HOM05D002460 ORTHO05D002716 3.4e-30 135.6 145 53.1
Gohir.D03G109300 Gossypium hirsutum HOM05D007505 ORTHO05D009476 4.4e-30 135.2 163 51.5
Sabra15G0107300 Salix brachista HOM05D007505 ORTHO05D009476 4.4e-30 135.2 155 52.3
FAN08G0495 Fragaria x ananassa HOM05D007505 ORTHO05D009476 5.7e-30 134.8 148 56.8
Gorai.003G115400 Gossypium raimondii HOM05D007505 ORTHO05D009476 7.5e-30 134.4 163 50.9
FvH4_5g06310 Fragaria vesca HOM05D007505 ORTHO05D009476 9.8e-30 134.0 148 56.1
FAN13G2123 Fragaria x ananassa HOM05D007505 ORTHO05D009476 9.8e-30 134.0 148 56.8
Gohir.A03G057100 Gossypium hirsutum HOM05D007505 ORTHO05D009476 1.3e-29 133.7 155 52.3
Sopen03g031290 Solanum pennellii HOM05D007505 ORTHO05D009476 1.3e-29 133.7 145 52.4
FAN18G1005 Fragaria x ananassa HOM05D007505 ORTHO05D009476 2.2e-29 132.9 148 56.1
PGSC0003DMG400018186 Solanum tuberosum HOM05D007505 ORTHO05D009476 2.9e-29 132.5 145 52.4
VMungo1215G0926 Vigna mungo HOM05D007505 ORTHO05D009476 4.9e-29 131.7 147 51.0
COL.COLO4_36758 Corchorus olitorius HOM05D007505 ORTHO05D009476 6.4e-29 131.3 153 50.3
Glyma.05G041700 Glycine max HOM05D007505 ORTHO05D009476 6.4e-29 131.3 144 50.7
Actinidia19362 Actinidia chinensis HOM05D007505 ORTHO05D009476 8.3e-29 131.0 147 54.4
Glyma.17G084500 Glycine max HOM05D007505 ORTHO05D009476 3.2e-28 129.0 149 51.0
Lalb_Chr12g0201901 Lupinus albus HOM05D007505 ORTHO05D009476 4.1e-28 128.6 149 52.3
MELO3C002298.2 Cucumis melo HOM05D007505 ORTHO05D009476 5.4e-28 128.3 144 54.2
Nitab4.5_0000003g0840 Nicotiana tabacum HOM05D007505 ORTHO05D009476 5.4e-28 128.3 142 53.5
Oeu040858.1 Olea europaea HOM05D007505 ORTHO05D009476 9.2e-28 127.5 144 52.1
RcHm_v2.0_Chr7g0192551 Rosa chinensis HOM05D007505 ORTHO05D009476 9.2e-28 127.5 148 56.1
Atru.chr9.2580 Acer truncatum HOM05D007505 ORTHO05D009476 1.2e-27 127.1 132 55.3
Manes.06G110400 Manihot esculenta HOM05D007505 ORTHO05D009476 1.2e-27 127.1 147 51.7
ClCG03G003000 Citrullus lanatus HOM05D007505 ORTHO05D009476 1.6e-27 126.7 143 55.9
Potri.012G086000 Populus trichocarpa HOM05D007505 ORTHO05D009476 1.6e-27 126.7 154 48.1
DCAR_021591 Daucus carota HOM05D007505 ORTHO05D009476 2.0e-27 126.3 143 52.4
vmacro19295 Vaccinium macrocarpon HOM05D007505 ORTHO05D009476 2.7e-27 125.9 149 53.0
Psat4g060840 Pisum sativum HOM05D007505 ORTHO05D009476 4.6e-27 125.2 145 52.4
QL10p006874 Quercus lobata HOM05D007505 ORTHO05D009476 5.9e-27 124.8 143 53.1
TWI23G0126 Tripterygium wilfordii HOM05D007505 ORTHO05D009476 5.9e-27 124.8 146 51.4
SGA_v2.0_scaffold90G27839 Striga asiatica HOM05D007505 ORTHO05D009476 1.0e-26 124.0 142 55.6
ECA247G3499 Erigeron canadensis HOM05D007505 ORTHO05D009476 1.7e-26 123.2 140 48.6
TPR.G37551 Trifolium pratense HOM05D007505 ORTHO05D009476 2.3e-26 122.9 144 50.0
AUR62008143 Chenopodium quinoa HOM05D007505 ORTHO05D009476 3.0e-26 122.5 130 53.8
Nitab4.5_0008713g0030 Nicotiana tabacum HOM05D007505 ORTHO05D009476 3.9e-26 122.1 146 52.1
Medtr4g104870 Medicago truncatula HOM05D007505 ORTHO05D009476 6.6e-26 121.3 144 50.7
EL10Ac5g10655 Beta vulgaris HOM05D007505 ORTHO05D009476 8.6e-26 120.9 132 49.2
Thecc.03G026000 Theobroma cacao HOM05D007505 ORTHO05D009476 1.1e-25 120.6 147 50.3
Nitab4.5_0001793g0050 Nicotiana tabacum HOM05D002460 ORTHO05D002716 2.5e-25 119.4 137 48.9
CsaV3_1G008840 Cucumis sativus L. HOM05D007505 ORTHO05D009476 3.3e-25 119.0 142 50.0
SalBow5G2951 Salvia bowleyana HOM05D007505 ORTHO05D009476 4.3e-25 118.6 131 50.4
AUR62028725 Chenopodium quinoa HOM05D007505 ORTHO05D009476 7.3e-25 117.9 142 48.6
Aqoxy5G03745 Aquilegia oxysepala HOM05D007505 ORTHO05D009476 6.2e-24 114.8 125 50.4
Sed0000715 Sechium edule HOM05D007505 ORTHO05D009476 6.2e-24 114.8 143 50.3
TAR371G0969 Trochodendron aralioides HOM05D007505 ORTHO05D009476 8.0e-24 114.4 148 46.6
MD06G1165700 Malus domestica HOM05D007505 ORTHO05D009476 1.8e-23 113.2 135 51.1
Cpa.g.sc159.18 Carica papaya HOM05D007505 ORTHO05D009476 2.3e-23 112.8 151 46.4
Hma1.2p1_0046F.1_g027150 Hydrangea macrophylla HOM05D007505 ORTHO05D009476 2.3e-23 112.8 143 49.7
Potri.012G086300 Populus trichocarpa HOM05D007505 ORTHO05D009476 6.8e-23 111.3 125 49.6
arahy.Tifrunner.gnm1.ann1.33YNZL Arachis hypogaea HOM05D007505 ORTHO05D009476 8.9e-23 110.9 128 52.3
Rhsim08G0177900 Rhododendron simsii HOM05D007505 ORTHO05D009476 1.5e-22 110.2 149 45.0
MD14G1171300 Malus domestica HOM05D007505 ORTHO05D009476 2.0e-22 109.8 145 48.3
CSS0021026 Camellia sinensis var. sinensis HOM05D007505 ORTHO05D009476 2.6e-22 109.4 135 49.6
Lsat_1_v5_gn_1_27760 Lactuca sativa HOM05D007505 ORTHO05D009476 2.6e-22 109.4 130 49.2
CiPaw.11G019500 Carya illinoinensis HOM05D007505 ORTHO05D009476 4.4e-22 108.6 147 50.3
Rhsim12G0168000 Rhododendron simsii HOM05D007505 ORTHO05D009476 5.8e-22 108.2 121 49.6
HanXRQChr02g0035811 Helianthus annuus HOM05D007505 ORTHO05D009476 9.8e-22 107.5 140 47.1
Duzib205G0367 Durio zibethinus HOM05D007505 ORTHO05D009476 1.3e-21 107.1 108 57.4
Lj4g0014699 Lotus japonicus HOM05D007505 ORTHO05D009476 1.3e-21 107.1 138 48.6
PSO541G6268 Papaver somniferum HOM05D007505 ORTHO05D009476 1.7e-21 106.7 155 43.9
PSO675G7842 Papaver somniferum HOM05D007505 ORTHO05D009476 6.4e-21 104.8 155 43.9
Phvul.003G205200 Phaseolus vulgaris HOM05D007505 ORTHO05D009476 4.1e-20 102.1 113 49.6
Nn4g22591 Nelumbo nucifera HOM05D007505 ORTHO05D009476 9.2e-20 100.9 141 45.4
CANSAT80G2368 Cannabis sativa HOM05D007505 ORTHO05D009476 2.0e-19 99.8 170 41.8
Sabra12G0061800 Salix brachista HOM05D007505 ORTHO05D009476 1.0e-18 97.4 125 46.4
unitig_61.g26472 Utricularia gibba HOM05D007505 ORTHO05D009476 5.0e-18 95.1 137 46.0
THA.LOC104825178 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 5.6e-17 91.7 151 41.7
Hma1.2p1_1092F.1_g255960 Hydrangea macrophylla HOM05D007505 ORTHO05D009476 7.3e-17 91.3 83 56.6
MBI16_g31776_MAGBIO Magnolia biondii HOM05D007505 ORTHO05D009476 7.3e-17 91.3 135 43.7
Sc04g0001500 Simmondsia chinensis HOM05D007505 ORTHO05D009476 7.3e-17 91.3 125 43.2
THA.LOC104800396 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 1.2e-16 90.5 150 41.3
THA.LOC104800397 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 1.2e-16 90.5 150 41.3
BcaNung07358 Brassica carinata HOM05D007505 ORTHO05D009476 2.8e-16 89.4 146 42.5
ATR0824G199 Amborella trichopoda HOM05D007505 ORTHO05D009476 3.6e-16 89.0 123 43.9
C01p20030 Brassica napus HOM05D006209 ORTHO05D007645 3.6e-16 89.0 128 45.3
BcaC09g50839 Brassica carinata HOM05D007505 ORTHO05D009476 4.7e-16 88.6 128 45.3
A01p16040 Brassica napus HOM05D006209 ORTHO05D007645 4.7e-16 88.6 128 45.3
BraA01t01538Z Brassica rapa HOM05D007505 ORTHO05D009476 6.2e-16 88.2 128 45.3
Nn3g16691 Nelumbo nucifera HOM05D007505 ORTHO05D009476 6.2e-16 88.2 137 46.7
Thhalv10026466m.g Eutrema salsugineum HOM05D007505 ORTHO05D009476 1.1e-15 87.4 140 42.1
AL7G28500 Arabidopsis lyrata HOM05D007505 ORTHO05D009476 1.4e-15 87.0 128 43.8
Dinv20598 Davidia involucrata HOM05D007505 ORTHO05D009476 1.4e-15 87.0 80 56.2
TAR629G2155 Trochodendron aralioides HOM05D001124 ORTHO05D001004 4.0e-15 85.5 108 50.9
BolC1t01930H Brassica oleracea HOM05D006209 ORTHO05D007645 5.2e-15 85.1 128 43.8
AT4G24700 Arabidopsis thaliana HOM05D007505 ORTHO05D009476 1.5e-14 83.6 131 44.3
Carub.0007s1636 Capsella rubella HOM05D007505 ORTHO05D009476 1.5e-14 83.6 129 43.4
BolC7t45867H Brassica oleracea HOM05D000464 ORTHO05D000408 1.3e-13 80.5 127 40.2
Duzib068G0261 Durio zibethinus HOM05D007505 ORTHO05D009476 1.7e-13 80.1 96 50.0
BraA03t14621Z Brassica rapa HOM05D000464 ORTHO05D000408 3.7e-13 79.0 140 37.9
Os02g0595200 Oryza sativa ssp. japonica HOM05D007505 ORTHO05D009476 1.4e-12 77.0 166 34.9
A03p55480 Brassica napus HOM05D007505 ORTHO05D009476 5.4e-12 75.1 127 37.8
Zm00001eb246040 Zea mays HOM05D007505 ORTHO05D009476 7.8e-11 71.2 163 35.0
CARHR232080 Cardamine hirsuta HOM05D007505 ORTHO05D009476 1.7e-10 70.1 130 39.2
HPP92_004606 Vanilla planifolia HOM05D007505 ORTHO05D009476 5.1e-10 68.6 132 40.9
Medtr3g065210 Medicago truncatula HOM05D008015 ORTHO05D009180 1.8e-07 60.1 105 35.2
VMungo1383G2632 Vigna mungo HOM05D008015 ORTHO05D009180 1.2e-06 57.4 128 32.0
Duzib268G1603 Durio zibethinus HOM05D008015 ORTHO05D009180 2.0e-06 56.6 85 41.2
LjContig00141g0001505 Lotus japonicus HOM05D008015 ORTHO05D009180 7.6e-06 54.7 99 37.4
MSTRG.3702 Avicennia marina HOM05D008015 ORTHO05D009180 9.9e-06 54.3 104 33.7


User provided reference genes

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