Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 8.0e-115 417.2 219 100.0
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 1.9e-76 289.7 177 80.2
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 5.3e-74 281.6 187 73.3
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 6.9e-74 281.2 188 73.9
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 9.9e-73 277.3 188 72.9
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 1.3e-72 276.9 198 70.2
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 2.9e-72 275.8 215 67.0
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 3.8e-72 275.4 188 73.4
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 3.2e-71 272.3 188 71.8
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 1.2e-70 270.4 216 63.0
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 1.2e-70 270.4 187 70.6
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 4.6e-70 268.5 188 71.3
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 5.1e-69 265.0 193 70.5
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 8.7e-69 264.2 188 71.3
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 8.7e-69 264.2 212 63.7
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 1.1e-68 263.8 188 70.7
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 1.1e-68 263.8 188 71.3
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 1.5e-68 263.5 188 70.7
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 1.9e-68 263.1 210 62.4
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 1.9e-68 263.1 212 63.7
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 3.3e-68 262.3 193 69.9
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 3.3e-68 262.3 188 67.6
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 4.3e-68 261.9 194 70.1
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 7.4e-68 261.2 187 70.1
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 1.3e-67 260.4 195 66.2
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 1.3e-67 260.4 188 69.7
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 1.3e-67 260.4 188 67.0
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 1.6e-67 260.0 197 68.5
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 3.7e-67 258.8 193 67.4
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 3.7e-67 258.8 191 68.1
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 3.7e-67 258.8 194 69.6
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 3.7e-67 258.8 218 63.3
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 4.8e-67 258.5 191 67.5
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 4.8e-67 258.5 195 66.7
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 1.1e-66 257.3 187 69.0
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 1.4e-66 256.9 212 64.6
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 3.1e-66 255.8 191 68.6
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 5.3e-66 255.0 188 69.1
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 6.9e-66 254.6 188 66.5
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 9.0e-66 254.2 189 68.3
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 9.0e-66 254.2 189 66.7
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 1.5e-65 253.4 191 67.0
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.5e-65 253.4 191 67.0
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.5e-65 253.4 191 67.0
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 2.0e-65 253.1 218 60.1
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 2.6e-65 252.7 175 72.6
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 7.6e-65 251.1 191 66.5
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 7.6e-65 251.1 189 69.3
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 7.6e-65 251.1 194 66.0
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 7.6e-65 251.1 191 66.0
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 1.0e-64 250.8 191 66.0
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 2.2e-64 249.6 193 65.8
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 2.9e-64 249.2 188 67.0
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 4.9e-64 248.4 189 67.7
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.9e-63 246.5 191 66.0
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 2.5e-63 246.1 189 65.1
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 2.5e-63 246.1 197 62.4
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 2.5e-63 246.1 194 63.9
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 2.5e-63 246.1 191 65.4
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 3.2e-63 245.7 195 63.6
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 4.2e-63 245.4 189 66.7
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 4.2e-63 245.4 192 65.6
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 1.6e-62 243.4 175 67.4
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 1.6e-62 243.4 239 56.5
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 3.5e-62 242.3 192 64.1
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 6.0e-62 241.5 195 63.6
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 6.0e-62 241.5 191 64.4
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 7.9e-62 241.1 194 65.5
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 1.0e-61 240.7 187 64.7
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 1.8e-61 240.0 191 63.9
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 3.9e-61 238.8 190 64.7
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 1.9e-60 236.5 155 71.0
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 2.5e-60 236.1 190 64.7
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 3.3e-60 235.7 191 62.3
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 1.3e-59 233.8 177 67.2
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 1.6e-59 233.4 190 63.7
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 1.6e-59 233.4 190 63.7
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 2.1e-59 233.0 177 67.8
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 1.1e-58 230.7 190 63.2
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 1.1e-58 230.7 188 61.2
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 1.4e-58 230.3 177 66.7
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 6.9e-58 228.0 176 65.9
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 6.9e-58 228.0 192 63.0
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 9.0e-58 227.6 190 63.2
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 9.0e-58 227.6 136 77.9
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 1.5e-57 226.9 187 63.1
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 2.6e-57 226.1 193 59.1
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 7.6e-57 224.6 152 73.7
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 1.3e-53 213.8 220 54.5
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 2.0e-49 199.9 244 46.7
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 1.1e-44 184.1 198 51.0
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 5.9e-41 171.8 192 52.6
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 9.4e-39 164.5 97 78.4
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 1.0e-37 161.0 159 51.6
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 1.4e-37 160.6 97 75.3
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 9.7e-36 154.5 159 49.7
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 1.7e-32 143.7 153 47.7
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 2.0e-28 130.2 106 64.2
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 1.8e-26 123.6 119 57.1
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 1.2e-25 120.9 121 57.0
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 1.7e-24 117.1 64 79.7
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 5.5e-23 112.1 62 83.9
Sed0002696 Sechium edule HOM05D007115 ORTHO05D008923 8.3e-19 98.2 90 60.0
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 2.7e-17 93.2 121 43.8
Ah.02g114850 Amaranthus hybridus HOM05D007115 ORTHO05D008923 7.7e-17 91.7 130 43.1
Cre17.g714900 Chlamydomonas reinhardtii HOM05D007115 ORTHO05D008923 9.8e-12 74.7 161 27.3
Sabra12G0072200 Salix brachista HOM05D007115 ORTHO05D008923 9.8e-12 74.7 60 63.3
Actinidia18341 Actinidia chinensis HOM05D000804 ORTHO05D000989 3.1e-10 69.7 72 56.9
FAN18G1815 Fragaria x ananassa HOM05D007115 ORTHO05D008923 5.4e-10 68.9 50 64.0
AL6G46780 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 1.2e-09 67.8 89 48.3
FAN13G2062 Fragaria x ananassa HOM05D007115 ORTHO05D008923 4.5e-09 65.9 52 63.5
PRCOL_00005130 Prasinoderma coloniale HOM05D003314 ORTHO05D004164 5.0e-08 62.4 83 38.6


User provided reference genes

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