Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B00040 Eucalyptus grandis HOM05D008046 ORTHO05D004477 1.4e-77 293.1 181 100.0
CiPaw.15G046100 Carya illinoinensis HOM05D008046 ORTHO05D004477 6.0e-15 85.1 183 44.8
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 5.1e-14 82.0 163 41.1
PGR031G3049 Punica granatum HOM05D008046 ORTHO05D004477 1.9e-13 80.1 171 46.2
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 2.5e-13 79.7 182 40.1
Sc23g0000380 Simmondsia chinensis HOM05D008046 ORTHO05D004477 4.3e-13 79.0 148 39.2
QL02p002440 Quercus lobata HOM05D008046 ORTHO05D004477 1.2e-12 77.4 165 44.8
COL.COLO4_12009 Corchorus olitorius HOM05D008046 ORTHO05D004477 2.8e-12 76.3 161 46.6
Potri.002G100500 Populus trichocarpa HOM05D008046 ORTHO05D004477 2.8e-12 76.3 166 42.2
Duzib116G0877 Durio zibethinus HOM05D008046 ORTHO05D004477 1.1e-11 74.3 162 45.7
Thecc.08G102400 Theobroma cacao HOM05D008046 ORTHO05D004477 1.1e-11 74.3 175 44.6
Haze_18268 Corylus avellana HOM05D008046 ORTHO05D004477 1.4e-11 73.9 168 49.4
Haze_18269 Corylus avellana HOM05D008046 ORTHO05D004477 1.4e-11 73.9 168 49.4
GSVIVG01009081001 Vitis vinifera HOM05D008046 ORTHO05D004477 1.4e-11 73.9 165 45.5
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 2.4e-11 73.2 142 40.8
Hma1.2p1_1148F.1_g261600 Hydrangea macrophylla HOM05D008046 ORTHO05D004477 1.2e-10 70.9 157 41.4
Nn1g05455 Nelumbo nucifera HOM05D008046 ORTHO05D004477 1.2e-10 70.9 161 45.3
Oeu048965.1 Olea europaea HOM05D008046 ORTHO05D004477 2.0e-10 70.1 168 42.3
Sabra02G0078700 Salix brachista HOM05D008046 ORTHO05D004477 3.4e-10 69.3 166 42.8
CSS0041686 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.3e-09 67.4 171 40.9
Gohir.A05G265833 Gossypium hirsutum HOM05D008046 ORTHO05D004477 1.3e-09 67.4 151 37.1
Gohir.A11G051100 Gossypium hirsutum HOM05D008176 ORTHO05D004477 2.2e-09 66.6 163 36.8
CSS0034401 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.9e-09 66.2 174 35.6
CSS0046665 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.9e-09 66.2 171 40.9
Gorai.007G059700 Gossypium raimondii HOM05D008176 ORTHO05D004477 3.8e-09 65.9 160 38.1
CSS0039341 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 6.4e-09 65.1 174 35.1
Potri.005G161700 Populus trichocarpa HOM05D008046 ORTHO05D004477 6.4e-09 65.1 166 44.6
Lj1g0004298 Lotus japonicus HOM05D008046 ORTHO05D004477 8.4e-09 64.7 163 44.8
MSTRG.3689 Avicennia marina HOM05D008046 ORTHO05D004477 1.9e-08 63.5 158 44.9
Duzib041G0197 Durio zibethinus HOM05D008046 ORTHO05D004477 1.9e-08 63.5 176 43.2
Ciclev10002675m.g Citrus clementina HOM05D008046 ORTHO05D004477 2.4e-08 63.2 176 38.6
Gohir.D05G267950 Gossypium hirsutum HOM05D008046 ORTHO05D004477 2.4e-08 63.2 154 40.9
Manes.02G149300 Manihot esculenta HOM05D008046 ORTHO05D004477 3.2e-08 62.8 174 42.0
Gorai.009G280100 Gossypium raimondii HOM05D008046 ORTHO05D004477 4.2e-08 62.4 155 39.4
DCAR_019289 Daucus carota HOM05D008046 ORTHO05D004477 7.1e-08 61.6 158 44.9
Lsat_1_v5_gn_6_104300 Lactuca sativa HOM05D008046 ORTHO05D004477 7.1e-08 61.6 147 44.2
TAR381G0533 Trochodendron aralioides HOM05D008046 ORTHO05D004477 7.1e-08 61.6 173 43.4
Sopen05g029890 Solanum pennellii HOM05D008176 ORTHO05D004477 1.2e-07 60.8 137 38.7
THA.LOC104800226 Tarenaya hassleriana HOM05D009138 ORTHO05D011294 2.7e-07 59.7 100 40.0
TPR.G24247 Trifolium pratense HOM05D008046 ORTHO05D004477 2.7e-07 59.7 159 39.6
Cpa.g.sc36.179 Carica papaya HOM05D008046 ORTHO05D004477 3.5e-07 59.3 140 45.7
Glyma.04G099200 Glycine max HOM05D008046 ORTHO05D004477 3.5e-07 59.3 166 46.4
QL06p048130 Quercus lobata HOM05D008176 ORTHO05D004477 3.5e-07 59.3 135 33.3
Prupe.1G522800 Prunus persica HOM05D018381 ORTHO05D004477 4.6e-07 58.9 171 38.0
SalBow5G1479 Salvia bowleyana HOM05D008046 ORTHO05D004477 4.6e-07 58.9 163 41.1
Migut.K01109 Erythranthe guttata HOM05D008046 ORTHO05D004477 6.0e-07 58.5 180 32.8
CiPaw.03G145800 Carya illinoinensis HOM05D008176 ORTHO05D004477 7.8e-07 58.2 145 38.6
CiPaw.04G103600 Carya illinoinensis HOM05D008176 ORTHO05D004477 7.8e-07 58.2 153 37.3
Sopen11g005030 Solanum pennellii HOM05D008176 ORTHO05D004477 7.8e-07 58.2 143 35.7
TAR628G0226 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.3e-06 57.4 167 35.9
Aqoxy6G00716 Aquilegia oxysepala HOM05D008046 ORTHO05D004477 1.7e-06 57.0 134 44.0
Lsat_1_v5_gn_1_3180 Lactuca sativa HOM05D008046 ORTHO05D004477 2.3e-06 56.6 168 40.5
Thecc.01G095600 Theobroma cacao HOM05D008176 ORTHO05D004477 3.0e-06 56.2 165 32.7
Medtr5g064640 Medicago truncatula HOM05D008046 ORTHO05D004477 5.1e-06 55.5 139 43.2
SGA_v2.0_scaffold115G32090 Striga asiatica HOM05D010872 ORTHO05D004477 5.1e-06 55.5 107 41.1
Haze_24851 Corylus avellana HOM05D008176 ORTHO05D004477 6.6e-06 55.1 147 44.2
Glyma.06G100900 Glycine max HOM05D008046 ORTHO05D004477 6.6e-06 55.1 168 39.9
Phvul.009G032900 Phaseolus vulgaris HOM05D008046 ORTHO05D004477 8.7e-06 54.7 164 39.0


User provided reference genes

Program Settings