Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A02962 Eucalyptus grandis HOM05D006369 ORTHO05D007764 2.7e-104 382.1 204 100.0
PGR042G2784 Punica granatum HOM05D006369 ORTHO05D007764 8.1e-61 237.7 202 66.8
Ciclev10021854m.g Citrus clementina HOM05D006369 ORTHO05D007764 6.2e-53 211.5 198 57.6
Thecc.03G000800 Theobroma cacao HOM05D006369 ORTHO05D007764 2.4e-52 209.5 188 58.0
CiPaw.05G237500 Carya illinoinensis HOM05D006369 ORTHO05D007764 1.2e-51 207.2 195 56.4
Manes.08G163800 Manihot esculenta HOM05D006369 ORTHO05D007764 2.0e-51 206.5 194 58.2
Dinv29169 Davidia involucrata HOM05D006369 ORTHO05D007764 1.0e-50 204.1 195 55.4
Prupe.2G324400 Prunus persica HOM05D006369 ORTHO05D007764 1.3e-50 203.8 193 56.5
Gohir.D07G184401 Gossypium hirsutum HOM05D006369 ORTHO05D007764 2.2e-50 203.0 191 59.2
Gohir.A07G176900 Gossypium hirsutum HOM05D006369 ORTHO05D007764 3.8e-50 202.2 191 58.6
Gorai.001G204600 Gossypium raimondii HOM05D006369 ORTHO05D007764 4.9e-50 201.8 191 59.2
RcHm_v2.0_Chr1g0383921 Rosa chinensis HOM05D006369 ORTHO05D007764 4.9e-50 201.8 193 55.4
CiPaw.06G019700 Carya illinoinensis HOM05D006369 ORTHO05D007764 1.1e-49 200.7 193 55.4
CANSAT21G0373 Cannabis sativa HOM05D006369 ORTHO05D007764 6.0e-48 194.9 206 54.9
THA.LOC104820876 Tarenaya hassleriana HOM05D006369 ORTHO05D007764 1.0e-47 194.1 196 54.6
FvH4_7g33790 Fragaria vesca HOM05D006369 ORTHO05D007764 1.8e-47 193.4 193 54.4
FAN03G1142 Fragaria x ananassa HOM05D006369 ORTHO05D007764 3.0e-47 192.6 193 54.4
FAN03G2967 Fragaria x ananassa HOM05D006369 ORTHO05D007764 3.0e-47 192.6 193 54.4
TAR365G0740 Trochodendron aralioides HOM05D006369 ORTHO05D007764 3.0e-47 192.6 195 53.8
ClCG10G009050 Citrullus lanatus HOM05D006369 ORTHO05D007764 3.9e-47 192.2 201 56.2
Potri.019G052400 Populus trichocarpa HOM05D006369 ORTHO05D007764 3.9e-47 192.2 189 54.5
Duzib211G0044 Durio zibethinus HOM05D006369 ORTHO05D007764 5.1e-47 191.8 195 53.8
FAN01G2653 Fragaria x ananassa HOM05D006369 ORTHO05D007764 6.7e-47 191.4 193 54.4
Cfa015892 Carpinus fangiana HOM05D006369 ORTHO05D007764 8.7e-47 191.0 198 57.1
FAN10G1961 Fragaria x ananassa HOM05D006369 ORTHO05D007764 8.7e-47 191.0 193 53.9
FAN10G2535 Fragaria x ananassa HOM05D006369 ORTHO05D007764 8.7e-47 191.0 193 53.9
Atru.chr7.1119 Acer truncatum HOM05D006369 ORTHO05D007764 1.1e-46 190.7 194 55.7
MD01G1234200 Malus domestica HOM05D006369 ORTHO05D007764 1.5e-46 190.3 194 55.7
MELO3C024871.2 Cucumis melo HOM05D006369 ORTHO05D007764 1.9e-46 189.9 198 57.1
A02p03940 Brassica napus HOM05D006369 ORTHO05D007764 2.5e-46 189.5 192 54.7
C02p08760 Brassica napus HOM05D006369 ORTHO05D007764 4.3e-46 188.7 190 55.3
BcaC03g18532 Brassica carinata HOM05D006369 ORTHO05D007764 7.4e-46 188.0 190 55.3
BolC2t06790H Brassica oleracea HOM05D006369 ORTHO05D007764 7.4e-46 188.0 190 55.3
CARHR196110 Cardamine hirsuta HOM05D006369 ORTHO05D007764 9.6e-46 187.6 200 54.5
MD07G1306400 Malus domestica HOM05D006369 ORTHO05D007764 9.6e-46 187.6 195 54.9
BcaNung00427 Brassica carinata HOM05D006369 ORTHO05D007764 1.3e-45 187.2 188 57.4
Carub.0006s1525 Capsella rubella HOM05D006369 ORTHO05D007764 1.3e-45 187.2 190 55.3
CsaV3_4G008720 Cucumis sativus L. HOM05D006369 ORTHO05D007764 1.3e-45 187.2 198 55.6
Thhalv10014449m.g Eutrema salsugineum HOM05D006369 ORTHO05D007764 1.6e-45 186.8 194 55.2
BraA02t05358Z Brassica rapa HOM05D006369 ORTHO05D007764 2.1e-45 186.4 193 54.9
AL6G28090 Arabidopsis lyrata HOM05D006369 ORTHO05D007764 1.4e-44 183.7 185 55.7
AT5G17070 Arabidopsis thaliana HOM05D006369 ORTHO05D007764 1.4e-44 183.7 190 55.3
Actinidia00694 Actinidia chinensis HOM05D006369 ORTHO05D007764 1.8e-44 183.3 199 53.8
Migut.F00102 Erythranthe guttata HOM05D006369 ORTHO05D007764 1.8e-44 183.3 189 54.0
Lalb_Chr19g0139881 Lupinus albus HOM05D006369 ORTHO05D007764 2.4e-44 183.0 192 55.2
Sp6g27090 Schrenkiella parvula HOM05D006369 ORTHO05D007764 5.3e-44 181.8 200 51.5
Aa31LG11G12610 Aethionema arabicum HOM05D006369 ORTHO05D007764 9.0e-44 181.0 196 55.1
Lj1A1033G61 Lonicera japonica HOM05D006369 ORTHO05D007764 9.0e-44 181.0 194 54.1
Cc02_g00390 Coffea canephora HOM05D006369 ORTHO05D007764 2.0e-43 179.9 203 51.2
GSVIVG01024423001 Vitis vinifera HOM05D006369 ORTHO05D007764 2.6e-43 179.5 163 59.5
CSS0035893 Camellia sinensis var. sinensis HOM05D006369 ORTHO05D007764 5.9e-43 178.3 212 50.0
BcaB01g04960 Brassica carinata HOM05D006369 ORTHO05D007764 1.3e-42 177.2 190 54.7
SalBow4G3280 Salvia bowleyana HOM05D006369 ORTHO05D007764 1.3e-42 177.2 201 49.8
MSTRG.8579 Avicennia marina HOM05D006369 ORTHO05D007764 2.2e-42 176.4 201 52.2
Sed0025457 Sechium edule HOM05D006369 ORTHO05D007764 8.5e-42 174.5 203 52.2
Haze_00598 Corylus avellana HOM05D006369 ORTHO05D007764 1.1e-41 174.1 174 59.8
Nitab4.5_0000820g0010 Nicotiana tabacum HOM05D006369 ORTHO05D007764 1.4e-41 173.7 199 51.3
Aqoxy2G03109 Aquilegia oxysepala HOM05D006369 ORTHO05D007764 2.5e-41 172.9 193 52.3
Phvul.011G021200 Phaseolus vulgaris HOM05D006369 ORTHO05D007764 2.5e-41 172.9 193 52.8
Nn3g21321 Nelumbo nucifera HOM05D006369 ORTHO05D007764 3.2e-41 172.6 210 50.5
CAN.G317.12 Capsicum annuum HOM05D006369 ORTHO05D007764 7.2e-41 171.4 197 52.3
Solyc03g062680.3 Solanum lycopersicum HOM05D006369 ORTHO05D007764 2.1e-40 169.9 206 52.9
Glyma.11G092500 Glycine max HOM05D006369 ORTHO05D007764 2.7e-40 169.5 196 52.0
VMungo1127G0993 Vigna mungo HOM05D006369 ORTHO05D007764 2.7e-40 169.5 200 51.0
Sopen03g015000 Solanum pennellii HOM05D006369 ORTHO05D007764 3.6e-40 169.1 204 52.0
Glyma.12G018800 Glycine max HOM05D006369 ORTHO05D007764 4.6e-40 168.7 195 50.8
Ca_04928_v3 Cicer arietinum L. HOM05D006369 ORTHO05D007764 6.1e-40 168.3 194 48.5
Hund18049 Selenicereus undatus HOM05D006369 ORTHO05D007764 7.9e-40 167.9 202 49.0
Medtr4g077610 Medicago truncatula HOM05D006369 ORTHO05D007764 3.0e-39 166.0 153 57.5
Nitab4.5_0000001g0150 Nicotiana tabacum HOM05D006369 ORTHO05D007764 3.9e-39 165.6 198 51.0
Psat7g171520 Pisum sativum HOM05D006369 ORTHO05D007764 3.9e-39 165.6 197 49.2
SGA_v2.0_scaffold18G08505 Striga asiatica HOM05D006369 ORTHO05D007764 5.1e-39 165.2 194 52.1
Lj3g0017971 Lotus japonicus HOM05D006369 ORTHO05D007764 5.7e-38 161.8 217 47.9
Oeu005324.1 Olea europaea HOM05D006369 ORTHO05D007764 9.7e-38 161.0 168 57.1
MBI06_g08525_MAGBIO Magnolia biondii HOM05D006369 ORTHO05D007764 2.2e-37 159.8 182 51.6
arahy.Tifrunner.gnm1.ann1.WFP97B Arachis hypogaea HOM05D006369 ORTHO05D007764 2.8e-37 159.5 221 46.6
Peaxi162Scf00076g00928 Petunia axillaris HOM05D006369 ORTHO05D007764 1.1e-36 157.5 133 62.4
HanXRQChr17g0541681 Helianthus annuus HOM05D006369 ORTHO05D007764 1.4e-36 157.1 198 48.0
Ah.08g212670 Amaranthus hybridus HOM05D006369 ORTHO05D007764 5.3e-36 155.2 197 47.2
Psat1g047200 Pisum sativum HOM05D006369 ORTHO05D007764 5.3e-36 155.2 144 56.9
vmacro02505 Vaccinium macrocarpon HOM05D006369 ORTHO05D007764 9.0e-36 154.5 230 43.0
EL10Ac7g17391 Beta vulgaris HOM05D006369 ORTHO05D007764 1.5e-35 153.7 207 45.4
TPR.G39567 Trifolium pratense HOM05D006369 ORTHO05D007764 2.0e-35 153.3 204 48.5
Psat1g047280 Pisum sativum HOM05D006369 ORTHO05D007764 5.9e-35 151.8 136 58.8
arahy.Tifrunner.gnm1.ann1.F9R2PF Arachis hypogaea HOM05D006369 ORTHO05D007764 7.7e-35 151.4 236 44.1
PSO210G6912 Papaver somniferum HOM05D006369 ORTHO05D007764 6.5e-34 148.3 200 47.0
PSO170G0520 Papaver somniferum HOM05D006369 ORTHO05D007764 8.5e-34 147.9 200 47.0
Sc05g0004440 Simmondsia chinensis HOM05D006369 ORTHO05D007764 1.4e-33 147.1 160 52.5
Lsat_1_v5_gn_3_37940 Lactuca sativa HOM05D006369 ORTHO05D007764 7.2e-33 144.8 210 44.8
Psat1g047240 Pisum sativum HOM05D006369 ORTHO05D007764 2.7e-32 142.9 128 59.4
CDE02G3455 Ceratophyllum demersum HOM05D006369 ORTHO05D007764 7.9e-32 141.4 208 42.8
ECA246G2850 Erigeron canadensis HOM05D006369 ORTHO05D007764 5.7e-30 135.2 184 44.0
HPP92_026820 Vanilla planifolia HOM05D006369 ORTHO05D007764 1.8e-28 130.2 188 45.2
DCAR_020401 Daucus carota HOM05D006369 ORTHO05D007764 4.1e-28 129.0 200 43.0
unitig_747.g21708 Utricularia gibba HOM05D006369 ORTHO05D007764 4.1e-28 129.0 254 39.0
Os06g0300700 Oryza sativa ssp. japonica HOM05D006369 ORTHO05D007764 1.5e-27 127.1 228 40.8
Rhsim13G0016700 Rhododendron simsii HOM05D006369 ORTHO05D007764 7.7e-27 124.8 270 36.3
BraA03t10137Z Brassica rapa HOM05D006369 ORTHO05D007764 2.9e-26 122.9 162 50.0
Zm00001eb381130 Zea mays HOM05D006369 ORTHO05D007764 1.9e-25 120.2 125 50.4
SEGI_01011 Sequoiadendron giganteum HOM05D006369 ORTHO05D007764 7.2e-25 118.2 115 54.8
ATR0213G006 Amborella trichopoda HOM05D006369 ORTHO05D007764 1.4e-23 114.0 174 44.3
AagrBONN_evm.TU.Sc2ySwM_344.1770 Anthoceros agrestis HOM05D006369 ORTHO05D007764 2.0e-19 100.1 117 47.0
COL.COLO4_13442 Corchorus olitorius HOM05D006369 ORTHO05D007764 2.9e-18 96.3 184 40.8
CBR_g17900 Chara braunii HOM05D006369 ORTHO05D007764 8.5e-18 94.7 117 45.3
Pp3c20_5600 Physcomitrium patens HOM05D006369 ORTHO05D007764 1.1e-17 94.4 113 46.9
Mapoly0084s0069 Marchantia polymorpha HOM05D006369 ORTHO05D007764 1.3e-13 80.9 181 33.1
Cpa.g.sc39.77 Carica papaya HOM05D006369 ORTHO05D007764 2.2e-13 80.1 50 76.0
C03p09390 Brassica napus HOM05D006369 ORTHO05D007764 8.2e-13 78.2 102 52.9
BcaB01g05232 Brassica carinata HOM05D006369 ORTHO05D007764 1.4e-12 77.4 102 52.9
Dinv06133 Davidia involucrata HOM05D006369 ORTHO05D007764 4.1e-12 75.9 60 58.3
SMO141G0301 Selaginella moellendorffii HOM05D006369 ORTHO05D007764 4.1e-12 75.9 117 39.3
BolC3t13440H Brassica oleracea HOM05D006369 ORTHO05D007764 1.3e-10 70.9 105 48.6
Hma1.2p1_1235F.1_g269100 Hydrangea macrophylla HOM05D006369 ORTHO05D007764 8.5e-10 68.2 140 37.1
RcHm_v2.0_Chr5g0041771 Rosa chinensis HOM05D006369 ORTHO05D007764 2.5e-09 66.6 64 46.9
Sabra19G0056200 Salix brachista HOM05D006369 ORTHO05D007764 2.5e-09 66.6 44 77.3
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 4.2e-09 65.9 51 58.8
Sabra19G0056300 Salix brachista HOM05D006369 ORTHO05D007764 4.4e-06 55.8 86 40.7


User provided reference genes

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