Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 3.7e-140 501.5 252 100.0
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 2.5e-104 382.5 244 79.5
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 7.3e-104 380.9 242 78.9
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 9.6e-104 380.6 244 78.3
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 6.2e-103 377.9 250 76.8
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 3.1e-102 375.6 244 77.0
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 3.1e-102 375.6 242 78.1
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 4.0e-102 375.2 250 74.8
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 5.3e-102 374.8 243 77.0
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 6.9e-102 374.4 252 73.8
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 6.9e-102 374.4 242 78.5
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 6.9e-102 374.4 251 74.1
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 9.0e-102 374.0 242 77.3
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 1.2e-101 373.6 251 74.5
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.6e-101 372.5 248 77.0
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 3.4e-101 372.1 241 78.4
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 5.8e-101 371.3 242 77.7
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 8.4e-100 367.5 243 75.7
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 1.1e-99 367.1 218 80.3
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.4e-99 366.7 246 76.8
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 1.4e-99 366.7 251 74.9
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 3.2e-99 365.5 251 74.9
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 4.2e-99 365.2 241 76.8
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 4.2e-99 365.2 225 78.2
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 5.4e-99 364.8 246 76.4
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 5.4e-99 364.8 218 80.7
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 7.1e-99 364.4 245 74.3
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 1.2e-98 363.6 223 80.3
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 1.6e-98 363.2 242 76.0
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 1.6e-98 363.2 246 74.4
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 4.6e-98 361.7 242 74.0
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 4.6e-98 361.7 245 73.1
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 4.6e-98 361.7 242 76.0
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 6.0e-98 361.3 255 72.5
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 7.9e-98 360.9 245 75.1
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 5.1e-97 358.2 242 75.2
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 6.7e-97 357.8 241 75.1
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 8.7e-97 357.5 225 76.0
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 1.5e-96 356.7 226 77.4
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 2.5e-96 355.9 255 70.6
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 9.6e-96 354.0 217 78.3
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 1.3e-95 353.6 252 71.4
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 3.7e-95 352.1 248 71.0
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 4.8e-95 351.7 242 71.9
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 6.2e-95 351.3 252 70.2
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 1.1e-94 350.5 240 73.8
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 1.1e-94 350.5 243 71.6
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.4e-94 350.1 218 77.5
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 1.4e-94 350.1 245 71.4
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 5.3e-94 348.2 230 75.2
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 6.9e-94 347.8 245 71.4
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 1.5e-93 346.7 221 76.0
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 1.5e-93 346.7 233 75.5
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 4.5e-93 345.1 218 77.5
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 9.9e-93 344.0 236 72.5
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 1.3e-92 343.6 245 70.6
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 6.4e-92 341.3 244 71.7
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 1.1e-91 340.5 242 70.7
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 1.4e-91 340.1 242 70.7
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 2.5e-91 339.3 242 70.2
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 5.5e-91 338.2 218 76.1
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 9.3e-91 337.4 220 73.2
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 1.6e-90 336.7 311 59.2
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 2.1e-90 336.3 242 69.8
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 3.5e-90 335.5 217 74.7
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 6.0e-90 334.7 225 72.0
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 7.9e-90 334.3 244 68.4
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 1.8e-89 333.2 218 75.2
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 1.8e-89 333.2 235 70.6
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 3.9e-89 332.0 218 73.9
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 6.7e-89 331.3 244 68.0
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.9e-88 329.7 229 72.5
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 4.3e-88 328.6 244 67.6
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 7.4e-88 327.8 243 69.1
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 2.1e-87 326.2 209 74.6
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 2.8e-87 325.9 195 81.0
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 3.7e-87 325.5 245 69.0
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 1.1e-86 323.9 252 65.5
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 1.4e-86 323.6 231 68.4
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 2.4e-86 322.8 199 79.4
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 2.0e-85 319.7 221 71.5
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 7.6e-85 317.8 242 67.4
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 1.0e-84 317.4 195 79.5
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 1.3e-84 317.0 195 80.5
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 8.4e-84 314.3 220 71.4
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 4.2e-83 312.0 208 73.6
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 1.2e-82 310.5 223 65.5
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 7.9e-82 307.8 218 68.8
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 1.8e-81 306.6 220 68.2
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 2.3e-81 306.2 220 70.0
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 2.3e-81 306.2 243 65.4
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 2.3e-81 306.2 243 65.4
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 2.3e-81 306.2 243 65.4
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 1.1e-80 303.9 245 64.1
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 1.1e-80 303.9 245 64.1
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 2.5e-80 302.8 220 69.1
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 5.7e-80 301.6 236 65.7
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 1.6e-79 300.1 229 65.9
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 1.1e-78 297.4 243 61.7
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 1.8e-78 296.6 204 71.1
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 1.2e-77 293.9 185 78.4
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 1.6e-74 283.5 245 61.6
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 1.0e-73 280.8 194 68.6
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 1.5e-72 276.9 199 68.8
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 3.3e-72 275.8 210 67.1
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 3.3e-72 275.8 181 73.5
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 9.1e-70 267.7 203 70.0
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 1.3e-68 263.8 283 56.5
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 5.7e-64 248.4 232 56.0
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 3.5e-61 239.2 220 52.7
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.9e-60 236.1 142 79.6
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 1.5e-56 223.8 187 59.4
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 2.0e-56 223.4 235 51.1
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 2.6e-56 223.0 193 58.5
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 5.7e-56 221.9 141 78.7
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 7.4e-56 221.5 234 50.4
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 5.0e-52 208.8 128 78.1
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 4.7e-34 149.1 184 44.6
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 9.5e-27 124.8 208 38.0
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.2e-26 124.4 102 61.8
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 1.8e-25 120.6 254 33.5
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 1.4e-22 110.9 202 34.2
PRCOL_00006636 Prasinoderma coloniale HOM05D006286 ORTHO05D007741 9.2e-22 108.2 184 39.7
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 7.5e-16 88.6 61 70.5
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 9.8e-16 88.2 47 87.2
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 4.1e-14 82.8 49 77.6
MCO03G036 Micromonas commoda HOM05D037152 ORTHO05D034124 7.6e-08 62.0 222 27.5
SEGI_15131 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 1.3e-07 61.2 34 79.4


User provided reference genes

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