Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A02670 Eucalyptus grandis HOM05D004948 ORTHO05D005824 2.9e-126 455.3 235 100.0
PGR083G1298 Punica granatum HOM05D004948 ORTHO05D005824 7.1e-93 344.4 236 79.7
Hma1.2p1_0142F.1_g064080 Hydrangea macrophylla HOM05D004948 ORTHO05D005824 1.9e-90 336.3 233 75.1
Thecc.03G191700 Theobroma cacao HOM05D004948 ORTHO05D005824 1.6e-89 333.2 233 75.5
CiPaw.06G006800 Carya illinoinensis HOM05D004948 ORTHO05D005824 8.1e-89 330.9 232 74.6
COL.COLO4_04803 Corchorus olitorius HOM05D004948 ORTHO05D005824 4.0e-88 328.6 233 73.8
Duzib068G0205 Durio zibethinus HOM05D004948 ORTHO05D005824 1.2e-87 327.0 233 73.4
Ciclev10005800m.g Citrus clementina HOM05D004948 ORTHO05D005824 2.0e-87 326.2 232 75.0
QL09p011186 Quercus lobata HOM05D004948 ORTHO05D005824 1.7e-86 323.2 232 74.6
Cpa.g.sc3.41 Carica papaya HOM05D004948 ORTHO05D005824 2.2e-86 322.8 234 73.1
PGR042G1790 Punica granatum HOM05D004948 ORTHO05D005824 2.2e-86 322.8 191 87.4
Migut.F01058 Erythranthe guttata HOM05D004948 ORTHO05D005824 3.2e-85 318.9 231 70.1
Cfa016354 Carpinus fangiana HOM05D004948 ORTHO05D005824 1.6e-84 316.6 232 71.1
Atru.chr1.284 Acer truncatum HOM05D004948 ORTHO05D005824 4.6e-84 315.1 227 76.2
Prupe.2G306200 Prunus persica HOM05D004948 ORTHO05D005824 4.6e-84 315.1 235 72.3
Dinv28347 Davidia involucrata HOM05D004948 ORTHO05D005824 1.0e-83 313.9 232 72.4
Lj1g0018821 Lotus japonicus HOM05D004948 ORTHO05D005824 1.0e-83 313.9 240 71.2
Potri.012G033100 Populus trichocarpa HOM05D004948 ORTHO05D005824 1.0e-83 313.9 233 73.0
GSVIVG01028728001 Vitis vinifera HOM05D004948 ORTHO05D005824 1.3e-83 313.5 233 71.2
Actinidia34187 Actinidia chinensis HOM05D004948 ORTHO05D005824 6.7e-83 311.2 233 70.0
MSTRG.65 Avicennia marina HOM05D004948 ORTHO05D005824 1.1e-82 310.5 219 74.0
Duzib205G0398 Durio zibethinus HOM05D004948 ORTHO05D005824 1.1e-82 310.5 233 72.1
TAR636G2931 Trochodendron aralioides HOM05D004948 ORTHO05D005824 1.5e-82 310.1 233 72.1
SGA_v2.0_scaffold10G05268 Striga asiatica HOM05D004948 ORTHO05D005824 1.9e-82 309.7 228 74.1
MD01G1214200 Malus domestica HOM05D004948 ORTHO05D005824 4.3e-82 308.5 225 72.4
MD07G1283800 Malus domestica HOM05D004948 ORTHO05D005824 4.3e-82 308.5 225 72.0
Manes.06G156200 Manihot esculenta HOM05D004948 ORTHO05D005824 4.3e-82 308.5 233 71.7
Dinv35301 Davidia involucrata HOM05D004948 ORTHO05D005824 4.8e-81 305.1 205 77.6
CANSAT21G0873 Cannabis sativa HOM05D004948 ORTHO05D005824 6.2e-81 304.7 233 68.7
SalBow2G2244 Salvia bowleyana HOM05D004948 ORTHO05D005824 1.1e-80 303.9 233 69.5
FAN10G0476 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.4e-80 303.5 233 69.5
FAN10G0469 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.8e-80 303.1 233 69.5
FAN06G2108 Fragaria x ananassa HOM05D004948 ORTHO05D005824 3.1e-80 302.4 233 69.1
MELO3C005865.2 Cucumis melo HOM05D004948 ORTHO05D005824 4.0e-80 302.0 212 74.1
FAN01G0333 Fragaria x ananassa HOM05D004948 ORTHO05D005824 4.0e-80 302.0 233 70.4
Haze_00103 Corylus avellana HOM05D004948 ORTHO05D005824 5.3e-80 301.6 247 64.8
ClCG01G000640 Citrullus lanatus HOM05D004948 ORTHO05D005824 6.9e-80 301.2 212 73.6
vmacro06582 Vaccinium macrocarpon HOM05D004948 ORTHO05D005824 6.9e-80 301.2 232 69.0
FAN06G4897 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.5e-79 300.1 233 68.7
arahy.Tifrunner.gnm1.ann1.LZU7FF Arachis hypogaea HOM05D004948 ORTHO05D005824 2.0e-79 299.7 201 74.6
TAR629G2953 Trochodendron aralioides HOM05D004948 ORTHO05D005824 2.6e-79 299.3 233 68.7
CAN.G108.18 Capsicum annuum HOM05D004948 ORTHO05D005824 4.5e-79 298.5 201 75.6
CsaV3_5G000730 Cucumis sativus L. HOM05D004948 ORTHO05D005824 4.5e-79 298.5 212 73.1
Sed0002242 Sechium edule HOM05D004948 ORTHO05D005824 4.5e-79 298.5 213 72.8
Peaxi162Scf00904g00460 Petunia axillaris HOM05D004948 ORTHO05D005824 7.6e-79 297.7 180 83.9
MBI07_g20438_MAGBIO Magnolia biondii HOM05D004948 ORTHO05D005824 1.3e-78 297.0 181 81.8
PGSC0003DMG400009097 Solanum tuberosum HOM05D004948 ORTHO05D005824 3.8e-78 295.4 201 75.1
Oeu037114.1 Olea europaea HOM05D004948 ORTHO05D005824 1.1e-77 293.9 223 70.9
FvH4_7g30910 Fragaria vesca HOM05D004948 ORTHO05D005824 1.9e-77 293.1 241 67.6
Potri.015G023400 Populus trichocarpa HOM05D004948 ORTHO05D005824 1.9e-77 293.1 226 71.7
Gohir.A12G252400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 2.5e-77 292.7 199 73.9
Solyc03g007480.3 Solanum lycopersicum HOM05D004948 ORTHO05D005824 2.5e-77 292.7 201 74.1
Sopen03g003430 Solanum pennellii HOM05D004948 ORTHO05D005824 2.5e-77 292.7 201 74.1
Rhsim03G0197700 Rhododendron simsii HOM05D004948 ORTHO05D005824 6.0e-76 288.1 223 69.1
Gorai.008G271400 Gossypium raimondii HOM05D004948 ORTHO05D005824 7.9e-76 287.7 211 70.6
RcHm_v2.0_Chr1g0379991 Rosa chinensis HOM05D004948 ORTHO05D005824 1.3e-75 287.0 172 85.5
Glyma.13G040600 Glycine max HOM05D004948 ORTHO05D005824 2.3e-75 286.2 218 70.6
Gohir.D12G253100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 2.3e-75 286.2 211 70.1
Aqoxy5G04108 Aquilegia oxysepala HOM05D004948 ORTHO05D005824 5.1e-75 285.0 201 72.1
Peaxi162Scf00618g00525 Petunia axillaris HOM05D004948 ORTHO05D005824 5.7e-74 281.6 187 78.1
Duzib084G1367 Durio zibethinus HOM05D004948 ORTHO05D005824 1.6e-73 280.0 233 66.1
Sc19g0001090 Simmondsia chinensis HOM05D004948 ORTHO05D005824 4.8e-73 278.5 232 62.9
THA.LOC104800283 Tarenaya hassleriana HOM05D004948 ORTHO05D005824 8.2e-73 277.7 222 67.1
PGSC0003DMG400028892 Solanum tuberosum HOM05D004948 ORTHO05D005824 5.3e-72 275.0 213 70.4
Solyc06g051820.4 Solanum lycopersicum HOM05D004948 ORTHO05D005824 1.2e-71 273.9 200 72.0
Manes.14G019200 Manihot esculenta HOM05D004948 ORTHO05D005824 3.4e-71 272.3 194 72.2
Sp6g15460 Schrenkiella parvula HOM05D004948 ORTHO05D005824 3.4e-71 272.3 235 61.7
AUR62021051 Chenopodium quinoa HOM05D004948 ORTHO05D005824 4.5e-71 271.9 183 72.1
Lalb_Chr04g0263671 Lupinus albus HOM05D004948 ORTHO05D005824 4.5e-71 271.9 192 71.9
AUR62031482 Chenopodium quinoa HOM05D004948 ORTHO05D005824 7.6e-71 271.2 183 71.6
FAN03G1348 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.0e-70 270.8 233 63.9
EL10Ac3g05356 Beta vulgaris HOM05D004948 ORTHO05D005824 1.3e-70 270.4 183 72.1
Sopen06g017830 Solanum pennellii HOM05D004948 ORTHO05D005824 1.3e-70 270.4 201 71.1
TWI23G0483 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 8.4e-70 267.7 181 75.7
DCAR_010636 Daucus carota HOM05D004948 ORTHO05D005824 1.4e-69 266.9 234 62.8
ATR1132G055 Amborella trichopoda HOM05D004948 ORTHO05D005824 2.5e-69 266.2 185 69.2
Aa31LG5G23580 Aethionema arabicum HOM05D004948 ORTHO05D005824 4.2e-69 265.4 178 73.6
Carub.0008s1349 Capsella rubella HOM05D004948 ORTHO05D005824 5.5e-69 265.0 222 63.5
Aa31sc29G60 Aethionema arabicum HOM05D004948 ORTHO05D005824 7.2e-69 264.6 178 73.6
Sabra12G0022300 Salix brachista HOM05D004948 ORTHO05D005824 7.2e-69 264.6 203 71.4
Thhalv10014692m.g Eutrema salsugineum HOM05D004948 ORTHO05D005824 1.2e-68 263.8 217 65.4
AL8G28010 Arabidopsis lyrata HOM05D004948 ORTHO05D005824 2.1e-68 263.1 222 63.5
HanXRQChr13g0392981 Helianthus annuus HOM05D004948 ORTHO05D005824 3.5e-68 262.3 199 70.9
Nitab4.5_0001331g0180 Nicotiana tabacum HOM05D004948 ORTHO05D005824 6.1e-68 261.5 191 74.3
Lsat_1_v5_gn_8_6120 Lactuca sativa HOM05D004948 ORTHO05D005824 1.3e-67 260.4 187 70.1
AT5G53310 Arabidopsis thaliana HOM05D004948 ORTHO05D005824 2.3e-67 259.6 235 60.9
ECA233G3864 Erigeron canadensis HOM05D004948 ORTHO05D005824 3.0e-67 259.2 202 67.8
A02p11140 Brassica napus HOM05D004948 ORTHO05D005824 5.1e-67 258.5 235 59.6
BraA02t06177Z Brassica rapa HOM05D004948 ORTHO05D005824 5.1e-67 258.5 235 59.6
BcaC03g14431 Brassica carinata HOM05D004948 ORTHO05D005824 8.7e-67 257.7 235 60.0
C02p18470 Brassica napus HOM05D004948 ORTHO05D005824 8.7e-67 257.7 235 60.0
BolC2t07987H Brassica oleracea HOM05D004948 ORTHO05D005824 8.7e-67 257.7 235 60.0
BcaB05g22031 Brassica carinata HOM05D004948 ORTHO05D005824 2.5e-66 256.1 236 60.2
Aa31LG3G9220 Aethionema arabicum HOM05D004948 ORTHO05D005824 9.7e-66 254.2 176 69.9
CARHR266350 Cardamine hirsuta HOM05D004948 ORTHO05D005824 9.7e-66 254.2 222 60.8
Nitab4.5_0000472g0200 Nicotiana tabacum HOM05D004948 ORTHO05D005824 9.7e-66 254.2 191 72.8
arahy.Tifrunner.gnm1.ann1.MD6354 Arachis hypogaea HOM05D004948 ORTHO05D005824 1.6e-65 253.4 171 73.7
Lj3A912T42 Lonicera japonica HOM05D004948 ORTHO05D005824 2.4e-64 249.6 202 64.4
Nn2g13651 Nelumbo nucifera HOM05D004948 ORTHO05D005824 2.4e-64 249.6 162 78.4
Lj1g0003063 Lotus japonicus HOM05D004948 ORTHO05D005824 4.5e-63 245.4 157 80.3
Actinidia31860 Actinidia chinensis HOM05D004948 ORTHO05D005824 3.8e-62 242.3 233 60.5
CAN.G204.5 Capsicum annuum HOM05D004948 ORTHO05D005824 1.1e-61 240.7 178 71.3
Gohir.D09G178100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.4e-61 240.4 164 74.4
Gorai.006G200200 Gossypium raimondii HOM05D004948 ORTHO05D005824 1.4e-61 240.4 164 74.4
Gohir.A09G183400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 2.5e-61 239.6 164 73.8
Cc02_g01980 Coffea canephora HOM05D004948 ORTHO05D005824 3.2e-61 239.2 158 77.8
Ca_16670_v3 Cicer arietinum L. HOM05D004948 ORTHO05D005824 1.2e-60 237.3 157 77.7
Os01g0621700 Oryza sativa ssp. japonica HOM05D004948 ORTHO05D005824 1.6e-60 236.9 171 68.4
Hund27721 Selenicereus undatus HOM05D004948 ORTHO05D005824 2.7e-60 236.1 216 59.7
Hund27734 Selenicereus undatus HOM05D004948 ORTHO05D005824 2.7e-60 236.1 216 59.7
TPR.G33862 Trifolium pratense HOM05D004948 ORTHO05D005824 2.5e-58 229.6 157 73.2
Glyma.04G238900 Glycine max HOM05D004948 ORTHO05D005824 5.7e-58 228.4 157 76.4
Psat0s97g0080 Pisum sativum HOM05D004948 ORTHO05D005824 9.7e-58 227.6 157 75.2
Glyma.06G124800 Glycine max HOM05D004948 ORTHO05D005824 6.3e-57 224.9 157 76.4
Lalb_Chr08g0240671 Lupinus albus HOM05D004948 ORTHO05D005824 6.3e-57 224.9 157 75.2
Phvul.009G135700 Phaseolus vulgaris HOM05D004948 ORTHO05D005824 2.4e-56 223.0 157 73.2
arahy.Tifrunner.gnm1.ann1.NIM4HJ Arachis hypogaea HOM05D004948 ORTHO05D005824 3.1e-56 222.6 157 70.7
CDE04G0161 Ceratophyllum demersum HOM05D004948 ORTHO05D005824 6.9e-56 221.5 179 61.5
HPP92_024433 Vanilla planifolia HOM05D004948 ORTHO05D005824 5.9e-55 218.4 155 67.1
DCAR_008996 Daucus carota HOM05D002473 ORTHO05D005824 1.0e-54 217.6 174 65.5
VMungo1309G3087 Vigna mungo HOM05D004948 ORTHO05D005824 2.2e-54 216.5 168 66.1
DCAR_014528 Daucus carota HOM05D000121 ORTHO05D005824 3.8e-54 215.7 155 69.0
Medtr3g090670 Medicago truncatula HOM05D004948 ORTHO05D005824 6.5e-54 214.9 147 74.8
unitig_747.g21853 Utricularia gibba HOM05D004948 ORTHO05D005824 6.5e-54 214.9 156 73.1
TWI39G0355 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 8.5e-54 214.5 137 79.6
arahy.Tifrunner.gnm1.ann1.AMC2P5 Arachis hypogaea HOM05D004948 ORTHO05D005824 1.9e-53 213.4 172 65.1
Zm00001eb432120 Zea mays HOM05D004948 ORTHO05D005824 1.6e-52 210.3 146 73.3
Actinidia08617 Actinidia chinensis HOM05D004948 ORTHO05D005824 2.0e-50 203.4 144 76.4
Nitab4.5_0002176g0030 Nicotiana tabacum HOM05D004948 ORTHO05D005824 5.7e-50 201.8 125 83.2
Ah.07g206090 Amaranthus hybridus HOM05D004948 ORTHO05D005824 2.2e-49 199.9 136 72.1
SHI54648 Sapria himalayana HOM05D004948 ORTHO05D005824 2.8e-49 199.5 219 56.2
SHI54754 Sapria himalayana HOM05D004948 ORTHO05D005824 2.8e-49 199.5 219 56.2
Mapoly0143s0028 Marchantia polymorpha HOM05D004948 ORTHO05D005824 3.1e-48 196.1 196 54.6
CSS0002011 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.2e-47 194.1 118 83.9
AagrBONN_evm.TU.Sc2ySwM_362.1882 Anthoceros agrestis HOM05D004948 ORTHO05D005824 5.0e-46 188.7 197 53.3
SMO361G0401 Selaginella moellendorffii HOM05D004948 ORTHO05D005824 5.0e-46 188.7 196 53.6
Pp3c8_900 Physcomitrium patens HOM05D004948 ORTHO05D005824 1.6e-44 183.7 183 53.6
CSS0025713 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.2e-41 173.3 106 82.1
SEGI_09652 Sequoiadendron giganteum HOM05D004948 ORTHO05D005824 2.2e-41 173.3 137 65.7
CSS0008262 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 6.3e-41 171.8 106 81.1
BolC9t57186H Brassica oleracea HOM05D004948 ORTHO05D005824 9.1e-40 167.9 180 53.3
BcaC04g20470 Brassica carinata HOM05D004948 ORTHO05D005824 2.0e-39 166.8 180 52.8
C09p43150 Brassica napus HOM05D004948 ORTHO05D005824 3.8e-38 162.5 170 54.1
CBR_g39340 Chara braunii HOM05D004948 ORTHO05D005824 4.2e-37 159.1 161 51.6
Lj1P1012T60 Lonicera japonica HOM05D004948 ORTHO05D005824 2.1e-36 156.8 108 75.0
BcaB08g35692 Brassica carinata HOM05D004948 ORTHO05D005824 3.0e-27 126.3 87 70.1
Lalb_Chr23g0271431 Lupinus albus HOM05D004948 ORTHO05D005824 1.4e-24 117.5 157 47.8
MCO05G504 Micromonas commoda HOM05D004948 ORTHO05D005824 3.6e-20 102.8 204 32.8
CSS0007759 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 6.2e-12 75.5 91 44.0
CSS0011379 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 4.0e-11 72.8 108 42.6
CSS0022164 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 8.9e-11 71.6 108 42.6


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