Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A02612 Eucalyptus grandis HOM05D000786 ORTHO05D000779 2.9e-57 224.9 110 100.0
Atru.chr5.1054 Acer truncatum HOM05D000786 ORTHO05D000779 1.6e-10 69.7 119 38.7
CiPaw.07G114700 Carya illinoinensis HOM05D000786 ORTHO05D000779 2.7e-10 68.9 116 38.8
TAR365G1099 Trochodendron aralioides HOM05D000786 ORTHO05D000779 3.5e-10 68.6 108 37.0
COL.COLO4_23268 Corchorus olitorius HOM05D000786 ORTHO05D000779 3.0e-09 65.5 73 47.9
Peaxi162Scf00001g00286 Petunia axillaris HOM05D000786 ORTHO05D000779 3.0e-09 65.5 119 37.0
CSS0023598 Camellia sinensis var. sinensis HOM05D000786 ORTHO05D000779 3.9e-09 65.1 115 37.4
MSTRG.21668 Avicennia marina HOM05D000786 ORTHO05D000779 5.1e-09 64.7 64 53.1
THA.LOC104817471 Tarenaya hassleriana HOM05D000786 ORTHO05D000779 6.6e-09 64.3 115 36.5
Cc03_g01160 Coffea canephora HOM05D000786 ORTHO05D000779 8.7e-09 63.9 70 52.9
Migut.O00976 Erythranthe guttata HOM05D000786 ORTHO05D045293 8.7e-09 63.9 60 60.0
Nn3g21623 Nelumbo nucifera HOM05D000786 ORTHO05D000779 1.1e-08 63.5 110 38.2
CSS0019123 Camellia sinensis var. sinensis HOM05D000786 ORTHO05D000779 1.9e-08 62.8 108 38.0
Rhsim04G0232400 Rhododendron simsii HOM05D000786 ORTHO05D000779 2.5e-08 62.4 73 47.9
TAR636G3362 Trochodendron aralioides HOM05D000786 ORTHO05D000779 3.3e-08 62.0 112 37.5
PGR119G0416 Punica granatum HOM05D000786 ORTHO05D000779 4.3e-08 61.6 39 64.1
GSVIVG01035043001 Vitis vinifera HOM05D000786 ORTHO05D000779 4.3e-08 61.6 58 56.9
Migut.O00780 Erythranthe guttata HOM05D000786 ORTHO05D045293 5.6e-08 61.2 58 58.6
Potri.014G123600 Populus trichocarpa HOM05D000786 ORTHO05D000779 7.3e-08 60.8 67 43.3
Sopen09g030450 Solanum pennellii HOM05D000786 ORTHO05D000779 7.3e-08 60.8 65 46.2
Actinidia15584 Actinidia chinensis HOM05D001250 ORTHO05D000627 9.6e-08 60.5 69 46.4
Glyma.19G214700 Glycine max HOM05D000786 ORTHO05D000779 9.6e-08 60.5 96 36.5
Gohir.D12G130300 Gossypium hirsutum HOM05D000786 ORTHO05D000779 9.6e-08 60.5 117 40.2
Ah.11g049440 Amaranthus hybridus HOM05D000786 ORTHO05D000779 1.3e-07 60.1 100 41.0
Cpa.g.sc9.97 Carica papaya HOM05D000786 ORTHO05D000779 1.3e-07 60.1 44 63.6
Haze_05005 Corylus avellana HOM05D000786 ORTHO05D000779 1.3e-07 60.1 117 36.8
EL10As5g23495 Beta vulgaris HOM05D000786 ORTHO05D000779 1.6e-07 59.7 100 37.0
Potri.010G140800 Populus trichocarpa HOM05D000786 ORTHO05D000779 1.6e-07 59.7 72 44.4
Solyc09g075650.3 Solanum lycopersicum HOM05D000786 ORTHO05D000779 1.6e-07 59.7 64 50.0
SGA_v2.0_scaffold376G50264 Striga asiatica HOM05D000786 ORTHO05D000779 1.6e-07 59.7 39 61.5
vmacro03014 Vaccinium macrocarpon HOM05D000786 ORTHO05D000779 1.6e-07 59.7 39 61.5
BcaB02g08768 Brassica carinata HOM05D000786 ORTHO05D000779 2.1e-07 59.3 105 36.2
Duzib133G0956 Durio zibethinus HOM05D000786 ORTHO05D000779 2.1e-07 59.3 67 47.8
Lsat_1_v5_gn_9_25421 Lactuca sativa HOM05D000786 ORTHO05D000779 2.1e-07 59.3 71 43.7
Ca_10303_v3 Cicer arietinum L. HOM05D000786 ORTHO05D000779 2.8e-07 58.9 102 39.2
Gohir.A12G126900 Gossypium hirsutum HOM05D000786 ORTHO05D000779 2.8e-07 58.9 117 39.3
Gorai.008G141600 Gossypium raimondii HOM05D000786 ORTHO05D000779 2.8e-07 58.9 117 39.3
Manes.01G225400 Manihot esculenta HOM05D000786 ORTHO05D000779 2.8e-07 58.9 97 41.2
Psat6g163480 Pisum sativum HOM05D000786 ORTHO05D000779 2.8e-07 58.9 98 33.7
CARHR172910 Cardamine hirsuta HOM05D000786 ORTHO05D000779 3.6e-07 58.5 66 40.9
Cc08_g11850 Coffea canephora HOM05D000786 ORTHO05D000779 3.6e-07 58.5 83 41.0
MELO3C021286.2 Cucumis melo HOM05D000786 ORTHO05D000779 3.6e-07 58.5 63 41.3
Phvul.001G211500 Phaseolus vulgaris HOM05D000786 ORTHO05D000779 3.6e-07 58.5 73 42.5
CANSAT25G1363 Cannabis sativa HOM05D000786 ORTHO05D000779 4.8e-07 58.2 86 39.5
CAN.G668.24 Capsicum annuum HOM05D000786 ORTHO05D000779 4.8e-07 58.2 79 43.0
DCAR_002871 Daucus carota HOM05D000786 ORTHO05D000779 4.8e-07 58.2 120 32.5
Sc13g0006300 Simmondsia chinensis HOM05D000786 ORTHO05D000779 4.8e-07 58.2 39 56.4
PGSC0003DMG400031801 Solanum tuberosum HOM05D000786 ORTHO05D000779 4.8e-07 58.2 67 46.3
SGA_v2.0_scaffold163G38016 Striga asiatica HOM05D000786 ORTHO05D000779 4.8e-07 58.2 38 57.9
Cfa005844 Carpinus fangiana HOM05D000786 ORTHO05D000779 6.2e-07 57.8 70 44.3
Ciclev10022952m.g Citrus clementina HOM05D000786 ORTHO05D000779 6.2e-07 57.8 101 40.6
Medtr1g087730 Medicago truncatula HOM05D000786 ORTHO05D000779 6.2e-07 57.8 59 45.8
Rhsim13G0006500 Rhododendron simsii HOM05D000786 ORTHO05D000779 6.2e-07 57.8 76 46.1
ATR1125G005 Amborella trichopoda HOM05D000786 ORTHO05D000779 8.1e-07 57.4 72 43.1
Carub.0005s2930 Capsella rubella HOM05D000786 ORTHO05D000779 8.1e-07 57.4 117 31.6
Eucgr.H01070 Eucalyptus grandis HOM05D000786 ORTHO05D000779 8.1e-07 57.4 39 59.0
Thhalv10001686m.g Eutrema salsugineum HOM05D000786 ORTHO05D000779 8.1e-07 57.4 72 44.4
Nitab4.5_0004002g0020 Nicotiana tabacum HOM05D000786 ORTHO05D000779 8.1e-07 57.4 118 35.6
TPR.G19780 Trifolium pratense HOM05D000786 ORTHO05D000779 8.1e-07 57.4 110 35.5
HPP92_025190 Vanilla planifolia HOM05D000786 ORTHO05D000779 8.1e-07 57.4 80 41.2
Ca_15820_v3 Cicer arietinum L. HOM05D000786 ORTHO05D000779 1.1e-06 57.0 39 59.0
Ca_15854_v3 Cicer arietinum L. HOM05D000786 ORTHO05D000779 1.1e-06 57.0 39 59.0
Duzib138G1722 Durio zibethinus HOM05D000786 ORTHO05D000779 1.1e-06 57.0 70 45.7
Glyma.07G007500 Glycine max HOM05D000786 ORTHO05D000779 1.1e-06 57.0 38 63.2
Manes.05G001600 Manihot esculenta HOM05D000786 ORTHO05D000779 1.1e-06 57.0 74 44.6
Psat5g036120 Pisum sativum HOM05D000786 ORTHO05D000779 1.1e-06 57.0 39 61.5
TAR362G0003 Trochodendron aralioides HOM05D000786 ORTHO05D000779 1.1e-06 57.0 110 38.2
ATR0706G273 Amborella trichopoda HOM05D000786 ORTHO05D000779 1.4e-06 56.6 39 64.1
AUR62011842 Chenopodium quinoa HOM05D000786 ORTHO05D000779 1.4e-06 56.6 89 36.0
HanXRQChr01g0000881 Helianthus annuus HOM05D000786 ORTHO05D000779 1.4e-06 56.6 62 43.5
Nitab4.5_0000116g0100 Nicotiana tabacum HOM05D000786 ORTHO05D000779 1.4e-06 56.6 68 45.6
vmacro02416 Vaccinium macrocarpon HOM05D000786 ORTHO05D000779 1.4e-06 56.6 77 41.6
CAN.G825.26 Capsicum annuum HOM05D000786 ORTHO05D000779 1.8e-06 56.2 38 60.5
Manes.03G201501 Manihot esculenta HOM05D000786 ORTHO05D000779 1.8e-06 56.2 66 43.9
Phvul.009G079000 Phaseolus vulgaris HOM05D000786 ORTHO05D000779 1.8e-06 56.2 39 61.5
VMungo1309G1255 Vigna mungo HOM05D000786 ORTHO05D000779 1.8e-06 56.2 39 61.5
Zm00001eb396430 Zea mays HOM05D000786 ORTHO05D000779 1.8e-06 56.2 37 67.6
Cpa.g.sc18.2 Carica papaya HOM05D000786 ORTHO05D000779 2.4e-06 55.8 71 47.9
CsaV3_4G001090 Cucumis sativus L. HOM05D000786 ORTHO05D000779 2.4e-06 55.8 39 59.0
Lsat_1_v5_gn_7_34521 Lactuca sativa HOM05D000786 ORTHO05D000779 2.4e-06 55.8 37 62.2
MBI18_g24950_MAGBIO Magnolia biondii HOM05D000786 ORTHO05D000779 2.4e-06 55.8 58 51.7
Medtr3g104640 Medicago truncatula HOM05D000786 ORTHO05D000779 2.4e-06 55.8 39 59.0
Thecc.01G309800 Theobroma cacao HOM05D000786 ORTHO05D000779 2.4e-06 55.8 70 48.6
TPR.G3521 Trifolium pratense HOM05D000786 ORTHO05D000779 2.4e-06 55.8 39 59.0
AT3G62640 Arabidopsis thaliana HOM05D000786 ORTHO05D000779 3.1e-06 55.5 115 28.7
MSTRG.19496 Avicennia marina HOM05D000786 ORTHO05D000779 3.1e-06 55.5 38 55.3
Glyma.04G052800 Glycine max HOM05D000786 ORTHO05D000779 3.1e-06 55.5 39 61.5
Glyma.08G190200 Glycine max HOM05D000786 ORTHO05D000779 3.1e-06 55.5 38 60.5
Glyma.10G015200 Glycine max HOM05D000786 ORTHO05D000779 3.1e-06 55.5 42 54.8
Lj1g0021494 Lotus japonicus HOM05D000786 ORTHO05D000779 3.1e-06 55.5 39 61.5
Medtr2g099630 Medicago truncatula HOM05D000786 ORTHO05D000779 3.1e-06 55.5 37 59.5
HPP92_007652 Vanilla planifolia HOM05D000786 ORTHO05D000779 3.1e-06 55.5 121 33.1
VMungo0331G1400 Vigna mungo HOM05D000786 ORTHO05D000779 3.1e-06 55.5 38 60.5
Ciclev10026799m.g Citrus clementina HOM05D000786 ORTHO05D000779 4.0e-06 55.1 38 55.3
Glyma.06G053300 Glycine max HOM05D000786 ORTHO05D000779 4.0e-06 55.1 39 59.0
Lsat_1_v5_gn_5_143041 Lactuca sativa HOM05D000786 ORTHO05D000779 4.0e-06 55.1 37 62.2
Lj5g0012143 Lotus japonicus HOM05D000786 ORTHO05D000779 4.0e-06 55.1 63 44.4
Lalb_Chr08g0244991 Lupinus albus HOM05D000786 ORTHO05D000779 4.0e-06 55.1 108 38.0
Oeu025238.1 Olea europaea HOM05D000786 ORTHO05D000779 4.0e-06 55.1 38 55.3
Psat5g095920 Pisum sativum HOM05D000786 ORTHO05D000779 4.0e-06 55.1 114 29.8
AUR62024685 Chenopodium quinoa HOM05D000786 ORTHO05D000779 5.3e-06 54.7 89 34.8
MELO3C017928.2 Cucumis melo HOM05D000786 ORTHO05D000779 5.3e-06 54.7 39 56.4
Hma1.2p1_0544F.1_g175620 Hydrangea macrophylla HOM05D000786 ORTHO05D000779 5.3e-06 54.7 39 53.8
Sp5g00870 Schrenkiella parvula HOM05D000786 ORTHO05D000779 5.3e-06 54.7 118 28.0
TWI12G0435 Tripterygium wilfordii HOM05D000786 ORTHO05D000779 5.3e-06 54.7 39 56.4
Zm00001eb014190 Zea mays HOM05D000786 ORTHO05D000779 5.3e-06 54.7 37 64.9
Aqoxy2G02520 Aquilegia oxysepala HOM05D000786 ORTHO05D000779 6.9e-06 54.3 39 59.0
Duzib177G0463 Durio zibethinus HOM05D000786 ORTHO05D000779 6.9e-06 54.3 39 56.4
HanXRQChr09g0238031 Helianthus annuus HOM05D000786 ORTHO05D000779 6.9e-06 54.3 37 59.5
Nn4g25661 Nelumbo nucifera HOM05D000786 ORTHO05D000779 6.9e-06 54.3 42 57.1
Os03g0302500 Oryza sativa ssp. japonica HOM05D000786 ORTHO05D000779 6.9e-06 54.3 37 62.2
Os05g0356800 Oryza sativa ssp. japonica HOM05D000786 ORTHO05D000779 6.9e-06 54.3 39 61.5
Phvul.010G136400 Phaseolus vulgaris HOM05D000786 ORTHO05D000779 6.9e-06 54.3 38 60.5
PGR044G0298 Punica granatum HOM05D000786 ORTHO05D000779 6.9e-06 54.3 38 52.6
Sc18g0002250 Simmondsia chinensis HOM05D000786 ORTHO05D000779 6.9e-06 54.3 39 59.0
Sopen06g022250 Solanum pennellii HOM05D000786 ORTHO05D000779 6.9e-06 54.3 37 62.2
Zm00001eb159980 Zea mays HOM05D000786 ORTHO05D000779 6.9e-06 54.3 38 52.6
AL5G45390 Arabidopsis lyrata HOM05D000786 ORTHO05D000779 9.0e-06 53.9 111 28.8
CSS0020676 Camellia sinensis var. sinensis HOM05D000786 ORTHO05D000779 9.0e-06 53.9 38 55.3
MD15G1056600 Malus domestica HOM05D000786 ORTHO05D000779 9.0e-06 53.9 68 38.2
Thecc.04G295200 Theobroma cacao HOM05D015449 ORTHO05D017881 9.0e-06 53.9 39 56.4


User provided reference genes

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