Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A02534 Eucalyptus grandis HOM05D007404 ORTHO05D009281 1.5e-144 516.2 259 100.0
Duzib093G1799 Durio zibethinus HOM05D007404 ORTHO05D009281 1.8e-49 200.3 259 43.6
Atru.chr8.1254 Acer truncatum HOM05D007404 ORTHO05D009281 3.1e-49 199.5 255 47.5
CiPaw.09G024800 Carya illinoinensis HOM05D007404 ORTHO05D009281 1.5e-48 197.2 232 49.6
Manes.08G038100 Manihot esculenta HOM05D007404 ORTHO05D009281 2.0e-48 196.8 249 45.8
COL.COLO4_29466 Corchorus olitorius HOM05D007404 ORTHO05D009281 3.4e-48 196.1 264 44.7
Prupe.7G088400 Prunus persica HOM05D007404 ORTHO05D009281 3.4e-48 196.1 256 46.1
Cfa020098 Carpinus fangiana HOM05D007404 ORTHO05D009281 5.9e-48 195.3 250 46.0
VMungo1383G2609 Vigna mungo HOM05D007404 ORTHO05D009281 5.9e-48 195.3 224 48.2
Haze_20093 Corylus avellana HOM05D007404 ORTHO05D009281 2.2e-47 193.4 250 46.0
Dinv25087 Davidia involucrata HOM05D007404 ORTHO05D009281 2.9e-47 193.0 253 45.1
QL07p025963 Quercus lobata HOM05D007404 ORTHO05D009281 1.1e-46 191.0 245 45.3
Phvul.001G199200 Phaseolus vulgaris HOM05D007404 ORTHO05D009281 3.2e-46 189.5 259 43.2
MD14G1045900 Malus domestica HOM05D007404 ORTHO05D009281 7.2e-46 188.3 260 44.6
CiPaw.10G021900 Carya illinoinensis HOM05D007404 ORTHO05D009281 9.4e-46 188.0 241 48.5
TWI74G0134 Tripterygium wilfordii HOM05D007404 ORTHO05D009281 9.4e-46 188.0 249 45.0
Thecc.05G182600 Theobroma cacao HOM05D007404 ORTHO05D009281 1.2e-45 187.6 258 42.2
Glyma.19G203100 Glycine max HOM05D007404 ORTHO05D009281 1.6e-45 187.2 258 43.4
Ciclev10012555m.g Citrus clementina HOM05D007404 ORTHO05D009281 7.9e-45 184.9 245 45.3
Glyma.03G205600 Glycine max HOM05D007404 ORTHO05D009281 7.9e-45 184.9 258 43.8
PGR004G0377 Punica granatum HOM05D007404 ORTHO05D009281 8.8e-44 181.4 249 44.2
Actinidia03848 Actinidia chinensis HOM05D007404 ORTHO05D009281 1.1e-43 181.0 254 44.9
CANSAT64G1742 Cannabis sativa HOM05D007404 ORTHO05D009281 1.1e-43 181.0 226 49.1
Cpa.g.sc222.4 Carica papaya HOM05D007404 ORTHO05D009281 1.5e-43 180.6 248 45.2
Ca_09089_v3 Cicer arietinum L. HOM05D007404 ORTHO05D009281 2.2e-42 176.8 221 45.7
Lj1g0004547 Lotus japonicus HOM05D007404 ORTHO05D009281 6.3e-42 175.3 227 48.9
Medtr7g107080 Medicago truncatula HOM05D007404 ORTHO05D009281 6.3e-42 175.3 226 46.0
arahy.Tifrunner.gnm1.ann1.T424Z8 Arachis hypogaea HOM05D007404 ORTHO05D009281 8.2e-42 174.9 248 43.1
Lalb_Chr25g0287801 Lupinus albus HOM05D007404 ORTHO05D009281 5.3e-41 172.2 245 42.9
RcHm_v2.0_Chr3g0477561 Rosa chinensis HOM05D007404 ORTHO05D009281 9.1e-41 171.4 222 45.0
TPR.G14403 Trifolium pratense HOM05D007404 ORTHO05D009281 2.6e-40 169.9 254 42.5
MELO3C024593.2 Cucumis melo HOM05D007404 ORTHO05D009281 3.5e-40 169.5 254 42.1
FAN05G3976 Fragaria x ananassa HOM05D007404 ORTHO05D009281 5.9e-40 168.7 227 44.5
Hma1.2p1_0304F.1_g119261 Hydrangea macrophylla HOM05D007404 ORTHO05D009281 1.0e-39 167.9 227 44.1
Gorai.002G232900 Gossypium raimondii HOM05D007404 ORTHO05D009281 2.2e-39 166.8 256 39.8
DCAR_013466 Daucus carota HOM05D007404 ORTHO05D009281 3.8e-39 166.0 254 44.5
ClCG01G015070 Citrullus lanatus HOM05D007404 ORTHO05D009281 5.0e-39 165.6 253 40.3
Oeu063091.1 Olea europaea HOM05D007404 ORTHO05D009281 5.0e-39 165.6 260 39.6
Psat3g026720 Pisum sativum HOM05D007404 ORTHO05D009281 6.5e-39 165.2 262 41.2
Sed0004973 Sechium edule HOM05D007404 ORTHO05D009281 6.5e-39 165.2 252 40.9
CsaV3_6G041180 Cucumis sativus L. HOM05D007404 ORTHO05D009281 8.5e-39 164.9 255 41.2
Potri.006G198500 Populus trichocarpa HOM05D007404 ORTHO05D009281 8.5e-39 164.9 230 45.2
FvH4_6g21130 Fragaria vesca HOM05D007404 ORTHO05D009281 1.1e-38 164.5 226 43.8
FAN09G0350 Fragaria x ananassa HOM05D007404 ORTHO05D009281 2.5e-38 163.3 227 43.2
FAN14G5090 Fragaria x ananassa HOM05D007404 ORTHO05D009281 3.2e-38 162.9 226 43.4
FAN02G0840 Fragaria x ananassa HOM05D007404 ORTHO05D009281 7.2e-38 161.8 227 44.1
Cc06_g07050 Coffea canephora HOM05D007404 ORTHO05D009281 3.6e-37 159.5 251 41.4
vmacro06064 Vaccinium macrocarpon HOM05D007404 ORTHO05D009281 3.6e-37 159.5 230 44.3
Gohir.A01G199200 Gossypium hirsutum HOM05D007404 ORTHO05D009281 1.4e-36 157.5 254 38.2
Rhsim03G0257900 Rhododendron simsii HOM05D007404 ORTHO05D009281 4.4e-35 152.5 254 40.2
Lj1C1059T6 Lonicera japonica HOM05D007404 ORTHO05D009281 6.3e-34 148.7 263 39.2
Actinidia03958 Actinidia chinensis HOM05D007404 ORTHO05D009281 1.1e-33 147.9 193 46.6
ECA238G2201 Erigeron canadensis HOM05D007404 ORTHO05D009281 1.8e-33 147.1 246 40.2
Sabra06G0152600 Salix brachista HOM05D007404 ORTHO05D009281 9.1e-33 144.8 257 39.3
MSTRG.19336 Avicennia marina HOM05D007404 ORTHO05D009281 1.6e-32 144.1 259 37.1
PGSC0003DMG400022875 Solanum tuberosum HOM05D007404 ORTHO05D009281 3.5e-32 142.9 233 38.2
SGA_v2.0_scaffold112G31676 Striga asiatica HOM05D007404 ORTHO05D009281 1.3e-31 141.0 250 38.0
Migut.J00747 Erythranthe guttata HOM05D007404 ORTHO05D009281 1.7e-31 140.6 254 37.4
Nitab4.5_0012268g0010 Nicotiana tabacum HOM05D007404 ORTHO05D009281 2.2e-31 140.2 235 37.4
TAR623G1670 Trochodendron aralioides HOM05D007404 ORTHO05D009281 2.2e-31 140.2 266 38.3
Lsat_1_v5_gn_2_102100 Lactuca sativa HOM05D007404 ORTHO05D009281 3.8e-31 139.4 244 38.9
Solyc11g045270.3 Solanum lycopersicum HOM05D007404 ORTHO05D009281 1.5e-30 137.5 250 36.8
Nn2g14441 Nelumbo nucifera HOM05D007404 ORTHO05D009281 1.9e-30 137.1 278 33.8
Peaxi162Scf00211g00002 Petunia axillaris HOM05D007404 ORTHO05D009281 1.9e-30 137.1 233 36.9
Gohir.D01G189300 Gossypium hirsutum HOM05D007404 ORTHO05D009281 2.5e-30 136.7 256 34.8
CAN.G13.10 Capsicum annuum HOM05D007404 ORTHO05D009281 3.2e-30 136.3 248 35.1
Nitab4.5_0000117g0060 Nicotiana tabacum HOM05D007404 ORTHO05D009281 3.2e-30 136.3 258 35.7
Nn2g14440 Nelumbo nucifera HOM05D007404 ORTHO05D009281 4.2e-30 136.0 283 35.0
Aqoxy1G00574 Aquilegia oxysepala HOM05D007404 ORTHO05D009281 3.6e-29 132.9 230 37.8
Sc07g0007250 Simmondsia chinensis HOM05D007404 ORTHO05D009281 3.6e-29 132.9 250 35.6
Sopen11g020730 Solanum pennellii HOM05D007404 ORTHO05D009281 1.4e-28 131.0 249 33.3
AUR62038411 Chenopodium quinoa HOM05D007404 ORTHO05D009281 4.0e-28 129.4 260 38.5
THA.LOC104826786 Tarenaya hassleriana HOM05D007404 ORTHO05D009281 6.8e-28 128.6 238 37.4
EL10Ac5g11794 Beta vulgaris HOM05D007404 ORTHO05D009281 1.2e-27 127.9 229 38.0
Ah.02g113930 Amaranthus hybridus HOM05D007404 ORTHO05D009281 1.5e-27 127.5 255 36.9
AUR62036300 Chenopodium quinoa HOM05D007404 ORTHO05D009281 2.6e-27 126.7 255 36.9
Hund10780 Selenicereus undatus HOM05D007404 ORTHO05D009281 2.6e-27 126.7 230 36.5
MBI14_g28309_MAGBIO Magnolia biondii HOM05D007404 ORTHO05D009281 4.1e-25 119.4 310 33.5
Dinv11908 Davidia involucrata HOM05D007404 ORTHO05D009281 5.3e-25 119.0 182 41.8
HanXRQChr14g0453181 Helianthus annuus HOM05D007404 ORTHO05D009281 2.0e-24 117.1 80 66.2
ATR0686G215 Amborella trichopoda HOM05D007404 ORTHO05D009281 2.9e-23 113.2 290 30.7
Zm00001eb170760 Zea mays HOM05D007404 ORTHO05D009281 3.2e-22 109.8 244 34.0
AT3G11890 Arabidopsis thaliana HOM05D007404 ORTHO05D009281 5.5e-22 109.0 140 45.7
Carub.0003s1121 Capsella rubella HOM05D007404 ORTHO05D009281 3.6e-21 106.3 149 41.6
SEGI_39351 Sequoiadendron giganteum HOM05D007404 ORTHO05D009281 6.1e-21 105.5 121 46.3
unitig_26.g9157 Utricularia gibba HOM05D000495 ORTHO05D009281 6.1e-21 105.5 256 32.4
BcaC05g29316 Brassica carinata HOM05D007404 ORTHO05D009281 4.0e-20 102.8 102 49.0
A05p37490 Brassica napus HOM05D007404 ORTHO05D009281 4.0e-20 102.8 102 49.0
C05p56050 Brassica napus HOM05D007404 ORTHO05D009281 4.0e-20 102.8 102 49.0
BolC5t34272H Brassica oleracea HOM05D007404 ORTHO05D009281 4.0e-20 102.8 102 49.0
BraA05t22547Z Brassica rapa HOM05D007404 ORTHO05D009281 4.0e-20 102.8 102 49.0
Sp3g10090 Schrenkiella parvula HOM05D007404 ORTHO05D009281 4.0e-20 102.8 146 41.8
BcaB06g25568 Brassica carinata HOM05D007404 ORTHO05D009281 5.2e-20 102.4 102 48.0
Aa31LG3G5700 Aethionema arabicum HOM05D007404 ORTHO05D009281 6.8e-20 102.1 132 43.9
Thhalv10020684m.g Eutrema salsugineum HOM05D007404 ORTHO05D009281 8.8e-20 101.7 90 54.4
CARHR086420 Cardamine hirsuta HOM05D007404 ORTHO05D009281 2.0e-19 100.5 140 42.1
HPP92_023288 Vanilla planifolia HOM05D007404 ORTHO05D009281 4.1e-17 92.8 83 48.2
Os08g0378800 Oryza sativa ssp. japonica HOM05D007404 ORTHO05D009281 1.1e-14 84.7 119 39.5
CDE09G0274 Ceratophyllum demersum HOM05D007404 ORTHO05D009281 5.5e-14 82.4 234 28.2
Mapoly0022s0106 Marchantia polymorpha HOM05D007404 ORTHO05D009281 1.6e-13 80.9 80 46.2
GSVIVG01022504001 Vitis vinifera HOM05D007404 ORTHO05D009281 7.0e-09 65.5 102 43.1
Cc04_g08240 Coffea canephora HOM05D002304 ORTHO05D002363 5.9e-08 62.4 85 40.0
AagrBONN_evm.TU.Sc2ySwM_340.357 Anthoceros agrestis HOM05D007404 ORTHO05D009281 1.0e-07 61.6 79 40.5
CBR_g31169 Chara braunii HOM05D002304 ORTHO05D002363 6.6e-07 58.9 61 44.3
Phvul.008G018600 Phaseolus vulgaris HOM05D002304 ORTHO05D002363 1.1e-06 58.2 60 41.7
Phvul.008G018900 Phaseolus vulgaris HOM05D002304 ORTHO05D002363 3.3e-06 56.6 61 42.6
Sabra12G0077100 Salix brachista HOM05D002304 ORTHO05D002363 3.3e-06 56.6 116 33.6
HPP92_021624 Vanilla planifolia HOM05D002304 ORTHO05D002363 4.3e-06 56.2 54 50.0
CAN.G302.5 Capsicum annuum HOM05D002304 ORTHO05D002363 5.6e-06 55.8 57 43.9
QL10p020791 Quercus lobata HOM05D002304 ORTHO05D002363 7.3e-06 55.5 54 46.3
Ah.03g135680 Amaranthus hybridus HOM05D002304 ORTHO05D002363 9.5e-06 55.1 54 48.1
CANSAT01G2027 Cannabis sativa HOM05D002304 ORTHO05D002363 9.5e-06 55.1 61 44.3
Potri.012G104700 Populus trichocarpa HOM05D002304 ORTHO05D002363 9.5e-06 55.1 116 33.6


User provided reference genes

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