Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 4.7e-157 557.8 273 100.0
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 1.7e-82 310.1 278 60.1
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 2.9e-82 309.3 278 57.9
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 4.2e-81 305.4 277 60.6
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 2.1e-80 303.1 273 59.3
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 4.7e-80 302.0 276 58.3
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 6.1e-80 301.6 273 59.0
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 6.1e-80 301.6 273 59.0
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 1.4e-79 300.4 276 57.6
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 3.0e-79 299.3 279 58.1
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 2.0e-78 296.6 275 56.7
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 2.6e-78 296.2 277 58.8
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 4.4e-78 295.4 202 69.8
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 1.3e-77 293.9 255 61.2
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 1.7e-77 293.5 268 57.5
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 1.4e-76 290.4 204 66.7
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 9.2e-76 287.7 235 63.0
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 1.2e-75 287.3 274 57.7
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 1.2e-75 287.3 269 56.9
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 1.2e-75 287.3 276 56.2
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 1.6e-75 287.0 274 57.7
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 2.0e-75 286.6 276 55.1
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 2.0e-75 286.6 272 57.4
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 2.0e-75 286.6 237 59.5
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 4.5e-75 285.4 243 58.0
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 1.0e-74 284.3 259 56.0
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 2.3e-74 283.1 272 56.6
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 2.9e-74 282.7 274 57.3
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 5.0e-74 282.0 280 56.1
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 6.6e-74 281.6 276 56.5
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 1.5e-73 280.4 221 60.2
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 2.5e-73 279.6 225 58.7
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 3.3e-73 279.3 218 64.2
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 9.5e-73 277.7 235 59.6
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 9.5e-73 277.7 210 62.9
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 2.1e-72 276.6 284 54.9
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 3.6e-72 275.8 203 63.1
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 1.0e-71 274.2 275 53.1
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 1.4e-71 273.9 276 53.6
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 1.4e-71 273.9 274 52.6
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 1.8e-71 273.5 226 61.5
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 1.8e-71 273.5 279 54.1
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 2.3e-71 273.1 271 54.6
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 4.0e-71 272.3 272 54.4
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 4.0e-71 272.3 211 63.0
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 1.2e-70 270.8 213 60.1
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 1.5e-70 270.4 225 57.3
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 2.0e-70 270.0 275 53.5
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 4.4e-70 268.9 236 58.1
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 5.8e-70 268.5 278 51.8
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 7.5e-70 268.1 201 64.7
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 1.7e-69 266.9 280 52.1
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 1.7e-69 266.9 234 58.1
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 6.4e-69 265.0 278 53.2
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 1.1e-68 264.2 281 53.4
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 1.1e-68 264.2 281 53.4
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 5.4e-68 261.9 227 57.3
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 5.4e-68 261.9 275 53.1
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 5.4e-68 261.9 283 50.9
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 7.0e-68 261.5 226 57.5
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 9.2e-68 261.2 235 57.9
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 9.2e-68 261.2 275 52.7
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 9.2e-68 261.2 278 53.2
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 9.2e-68 261.2 188 69.1
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 1.2e-67 260.8 235 57.4
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 1.6e-67 260.4 276 53.6
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 2.7e-67 259.6 234 55.6
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 2.7e-67 259.6 222 57.7
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 7.8e-67 258.1 281 52.3
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 1.0e-66 257.7 269 51.3
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 1.3e-66 257.3 280 52.5
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 2.3e-66 256.5 204 62.7
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 3.9e-66 255.8 263 52.1
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 6.6e-66 255.0 204 62.7
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 8.6e-66 254.6 286 52.8
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 1.1e-65 254.2 263 52.1
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 1.1e-65 254.2 234 55.1
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 1.1e-65 254.2 234 55.1
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 1.1e-65 254.2 234 55.1
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 1.1e-65 254.2 192 63.5
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 5.6e-65 251.9 226 56.2
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 7.3e-65 251.5 263 51.7
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 2.1e-64 250.0 264 52.3
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 8.9e-63 244.6 274 51.1
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 1.5e-62 243.8 189 60.8
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 9.8e-62 241.1 195 60.0
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 1.3e-61 240.7 268 50.7
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 8.3e-61 238.0 251 50.6
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 1.1e-60 237.7 251 51.4
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 7.1e-60 235.0 266 49.6
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 2.1e-59 233.4 270 49.3
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 1.3e-58 230.7 203 54.2
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 1.4e-55 220.7 192 54.7
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 3.1e-55 219.5 268 46.6
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 2.0e-54 216.9 275 46.5
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 6.4e-53 211.8 232 48.3
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 4.3e-49 199.1 198 53.5
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 6.8e-47 191.8 212 51.4
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 3.4e-46 189.5 226 42.5
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 3.4e-46 189.5 271 39.9
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 1.3e-45 187.6 153 60.1
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 2.4e-44 183.3 205 49.8
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 8.7e-42 174.9 174 54.0
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 2.1e-35 153.7 187 43.3
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 6.6e-34 148.7 157 50.3
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 1.1e-33 147.9 198 41.4
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 1.4e-23 114.4 185 38.4
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 1.3e-21 107.8 167 34.1
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 2.1e-19 100.5 75 60.0
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 2.7e-19 100.1 220 30.0
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 6.0e-19 99.0 126 42.1
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 1.9e-17 94.0 63 69.8
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 2.8e-16 90.1 218 32.6
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 3.1e-15 86.7 64 59.4
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 3.9e-10 69.7 65 53.8
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 1.1e-09 68.2 65 52.3
arahy.Tifrunner.gnm1.ann1.V9LMLG Arachis hypogaea HOM05D006815 ORTHO05D008536 5.9e-06 55.8 36 69.4


User provided reference genes

Program Settings